RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 GATMP50440 423 aa16.54■□□□□ 0.24
CSNK1E-210ENST00000442216 CACNB1Q02641 598 aaPredicted RBP16.54■□□□□ 0.24
CSNK1E-210ENST00000442216 PAN2Q504Q3 1202 aaKnown RBP16.54■□□□□ 0.24
CSNK1E-210ENST00000442216 GLB1LQ6UWU2 654 aa16.54■□□□□ 0.24
CSNK1E-210ENST00000442216 AGMOQ6ZNB7 445 aa16.54■□□□□ 0.24
CSNK1E-210ENST00000442216 TAS1R3Q7RTX0 852 aa16.54■□□□□ 0.24
CSNK1E-210ENST00000442216 MYCT1Q8N699 235 aa16.54■□□□□ 0.24
CSNK1E-210ENST00000442216 RNF169Q8NCN4 708 aa16.54■□□□□ 0.24
CSNK1E-210ENST00000442216 MYLIPQ8WY64 445 aa16.54■□□□□ 0.24
CSNK1E-210ENST00000442216 DNAJC19Q96DA6 116 aa16.54■□□□□ 0.24
CSNK1E-210ENST00000442216 EIF2AQ9BY44 585 aaKnown RBP16.54■□□□□ 0.24
CSNK1E-210ENST00000442216 MRPL4Q9BYD3 311 aaKnown RBP16.54■□□□□ 0.24
CSNK1E-210ENST00000442216 ST6GALNAC4Q9H4F1 302 aa16.54■□□□□ 0.24
CSNK1E-210ENST00000442216 PDZD7Q9H5P4 517 aa16.54■□□□□ 0.24
CSNK1E-210ENST00000442216 CERS4Q9HA82 394 aa16.54■□□□□ 0.24
CSNK1E-210ENST00000442216 RSAD1Q9HA92 442 aa16.54■□□□□ 0.24
CSNK1E-210ENST00000442216 AAASQ9NRG9 546 aa16.54■□□□□ 0.24
CSNK1E-210ENST00000442216 SEL1LQ9UBV2 794 aa16.54■□□□□ 0.24
CSNK1E-210ENST00000442216 KCNH3Q9ULD8 1083 aa16.54■□□□□ 0.24
CSNK1E-210ENST00000442216 TNFSF13BQ9Y275 285 aa16.54■□□□□ 0.24
CSNK1E-210ENST00000442216 SZT2Q5T011 3432 aa16.54■□□□□ 0.24
CSNK1E-210ENST00000442216 CHD9Q3L8U1 2897 aa16.53■□□□□ 0.24
CSNK1E-210ENST00000442216 PLXNA4Q9HCM2 1894 aa16.53■□□□□ 0.24
CSNK1E-210ENST00000442216 A0A1W2PQ27 194 aa16.53■□□□□ 0.24
CSNK1E-210ENST00000442216 A0A1W2PQ64 194 aa16.53■□□□□ 0.24
CSNK1E-210ENST00000442216 A0A1W2PQD8 194 aa16.53■□□□□ 0.24
CSNK1E-210ENST00000442216 EPOPA6NHQ4 379 aa16.53■□□□□ 0.24
CSNK1E-210ENST00000442216 H3BNC9 293 aa16.53■□□□□ 0.24
CSNK1E-210ENST00000442216 INPPL1O15357 1258 aa16.53■□□□□ 0.24
CSNK1E-210ENST00000442216 POLR2DO15514 142 aaKnown RBP16.53■□□□□ 0.24
CSNK1E-210ENST00000442216 OFD1O75665 1012 aa16.53■□□□□ 0.24
CSNK1E-210ENST00000442216 ITGA4P13612 1032 aa16.53■□□□□ 0.24
CSNK1E-210ENST00000442216 FOSL2P15408 326 aa16.53■□□□□ 0.24
CSNK1E-210ENST00000442216 GAP43P17677 238 aa16.53■□□□□ 0.24
CSNK1E-210ENST00000442216 STRN3Q13033 797 aa16.53■□□□□ 0.24
CSNK1E-210ENST00000442216 CSPP1Q1MSJ5 1256 aa16.53■□□□□ 0.24
CSNK1E-210ENST00000442216 TMEM132AQ24JP5 1023 aa16.53■□□□□ 0.24
CSNK1E-210ENST00000442216 DCAF4L1Q3SXM0 396 aa16.53■□□□□ 0.24
CSNK1E-210ENST00000442216 NT5DC1Q5TFE4 455 aa16.53■□□□□ 0.24
CSNK1E-210ENST00000442216 ATF7IP2Q5U623 682 aa16.53■□□□□ 0.24
CSNK1E-210ENST00000442216 CNNM4Q6P4Q7 775 aa16.53■□□□□ 0.24
CSNK1E-210ENST00000442216 DYMQ7RTS9 669 aa16.53■□□□□ 0.24
CSNK1E-210ENST00000442216 HAUS6Q7Z4H7 955 aa16.53■□□□□ 0.24
CSNK1E-210ENST00000442216 SPRED2Q7Z698 418 aa16.53■□□□□ 0.24
CSNK1E-210ENST00000442216 FAM178BQ8IXR5 827 aa16.53■□□□□ 0.24
CSNK1E-210ENST00000442216 HELQQ8TDG4 1101 aa16.53■□□□□ 0.24
CSNK1E-210ENST00000442216 LPPQ93052 612 aa16.53■□□□□ 0.24
CSNK1E-210ENST00000442216 DHX58Q96C10 678 aa16.53■□□□□ 0.24
CSNK1E-210ENST00000442216 ACO2Q99798 780 aaKnown RBP16.53■□□□□ 0.24
CSNK1E-210ENST00000442216 C11orf84Q9BUA3 381 aaPredicted RBP16.53■□□□□ 0.24
CSNK1E-210ENST00000442216 CWH43Q9H720 699 aa16.53■□□□□ 0.24
CSNK1E-210ENST00000442216 TYW1Q9NV66 732 aaKnown RBP16.53■□□□□ 0.24
CSNK1E-210ENST00000442216 KANSL3Q9P2N6 904 aa16.53■□□□□ 0.24
CSNK1E-210ENST00000442216 USP25Q9UHP3 1055 aa16.53■□□□□ 0.24
CSNK1E-210ENST00000442216 GIT1Q9Y2X7 761 aa16.53■□□□□ 0.24
CSNK1E-210ENST00000442216 FAM237AA0A1B0GTK4 181 aa16.52■□□□□ 0.24
CSNK1E-210ENST00000442216 FRMD3A2A2Y4 597 aa16.52■□□□□ 0.24
CSNK1E-210ENST00000442216 TTLL13PA6NNM8 815 aa16.52■□□□□ 0.24
CSNK1E-210ENST00000442216 LPXNO60711 386 aa16.52■□□□□ 0.24
CSNK1E-210ENST00000442216 NPTXRO95502 500 aa16.52■□□□□ 0.24
CSNK1E-210ENST00000442216 EDN1P05305 212 aa16.52■□□□□ 0.24
CSNK1E-210ENST00000442216 LAG3P18627 525 aa16.52■□□□□ 0.24
CSNK1E-210ENST00000442216 LIG1P18858 919 aa16.52■□□□□ 0.24
CSNK1E-210ENST00000442216 CTNNB1P35222 781 aa16.52■□□□□ 0.24
CSNK1E-210ENST00000442216 NOMO2Q5JPE7 1267 aa16.52■□□□□ 0.24
CSNK1E-210ENST00000442216 CHAMP1Q96JM3 812 aa16.52■□□□□ 0.24
CSNK1E-210ENST00000442216 FIZ1Q96SL8 496 aa16.52■□□□□ 0.24
CSNK1E-210ENST00000442216 PTPRHQ9HD43 1115 aa16.52■□□□□ 0.24
CSNK1E-210ENST00000442216 MTUS1Q9ULD2 1270 aa16.52■□□□□ 0.24
CSNK1E-210ENST00000442216 HPSEQ9Y251 543 aa16.52■□□□□ 0.24
CSNK1E-210ENST00000442216 PCDHB12Q9Y5F1 795 aa16.52■□□□□ 0.24
CSNK1E-210ENST00000442216 ATG2AQ2TAZ0 1938 aa16.52■□□□□ 0.23
CSNK1E-210ENST00000442216 MEIS3P2A8K0S8 358 aa16.51■□□□□ 0.23
CSNK1E-210ENST00000442216 K7ENM7 598 aa16.51■□□□□ 0.23
CSNK1E-210ENST00000442216 GTPBP6O43824 516 aaPredicted RBP16.51■□□□□ 0.23
CSNK1E-210ENST00000442216 PROZP22891 400 aa16.51■□□□□ 0.23
CSNK1E-210ENST00000442216 GTF2BQ00403 316 aa16.51■□□□□ 0.23
CSNK1E-210ENST00000442216 GPM6BQ13491 265 aa16.51■□□□□ 0.23
CSNK1E-210ENST00000442216 ADGRE1Q14246 886 aa16.51■□□□□ 0.23
CSNK1E-210ENST00000442216 ZPBP2Q6X784 338 aa16.51■□□□□ 0.23
CSNK1E-210ENST00000442216 LRRC55Q6ZSA7 311 aa16.51■□□□□ 0.23
CSNK1E-210ENST00000442216 CDR2LQ86X02 465 aaPredicted RBP16.51■□□□□ 0.23
CSNK1E-210ENST00000442216 URGCPQ8TCY9 931 aa16.51■□□□□ 0.23
CSNK1E-210ENST00000442216 HVCN1Q96D96 273 aa16.51■□□□□ 0.23
CSNK1E-210ENST00000442216 C7orf25Q9BPX7 421 aa16.51■□□□□ 0.23
CSNK1E-210ENST00000442216 LMAN2LQ9H0V9 348 aa16.51■□□□□ 0.23
CSNK1E-210ENST00000442216 ZHX3Q9H4I2 956 aa16.51■□□□□ 0.23
CSNK1E-210ENST00000442216 OLFML3Q9NRN5 406 aa16.51■□□□□ 0.23
CSNK1E-210ENST00000442216 RFXAPO00287 272 aa16.5■□□□□ 0.23
CSNK1E-210ENST00000442216 TOM1L1O75674 476 aa16.5■□□□□ 0.23
CSNK1E-210ENST00000442216 PIGRP01833 764 aa16.5■□□□□ 0.23
CSNK1E-210ENST00000442216 SLFN14P0C7P3 912 aa16.5■□□□□ 0.23
CSNK1E-210ENST00000442216 PFKFB1P16118 471 aa16.5■□□□□ 0.23
CSNK1E-210ENST00000442216 PTPROQ16827 1216 aa16.5■□□□□ 0.23
CSNK1E-210ENST00000442216 SPOUT1Q5T280 376 aaKnown RBP16.5■□□□□ 0.23
CSNK1E-210ENST00000442216 EEF1DP3Q658K8 133 aa16.5■□□□□ 0.23
CSNK1E-210ENST00000442216 MPZL3Q6UWV2 235 aa16.5■□□□□ 0.23
CSNK1E-210ENST00000442216 ZNF720Q7Z2F6 126 aa16.5■□□□□ 0.23
CSNK1E-210ENST00000442216 SFR1Q86XK3 245 aa16.5■□□□□ 0.23
CSNK1E-210ENST00000442216 CCDC65Q8IXS2 484 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms