RNA–Protein interactions for RNA: ENST00000441983.5

TRAPPC12-210, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-210ENST00000441983 SNRPFP62306 86 aaKnown RBP16.61■□□□□ 0.25
TRAPPC12-210ENST00000441983 TCTN1Q2MV58 587 aa16.61■□□□□ 0.25
TRAPPC12-210ENST00000441983 C9orf50Q5SZB4 431 aa16.61■□□□□ 0.25
TRAPPC12-210ENST00000441983 L1TD1Q5T7N2 865 aaKnown RBP16.61■□□□□ 0.25
TRAPPC12-210ENST00000441983 ATF7IP2Q5U623 682 aa16.61■□□□□ 0.25
TRAPPC12-210ENST00000441983 EPM2AIP1Q7L775 607 aaPredicted RBP16.61■□□□□ 0.25
TRAPPC12-210ENST00000441983 TOP1MTQ969P6 601 aa16.61■□□□□ 0.25
TRAPPC12-210ENST00000441983 ACO2Q99798 780 aaKnown RBP16.61■□□□□ 0.25
TRAPPC12-210ENST00000441983 FAM105AQ9NUU6 356 aa16.61■□□□□ 0.25
TRAPPC12-210ENST00000441983 TMEM161AQ9NX61 479 aa16.61■□□□□ 0.25
TRAPPC12-210ENST00000441983 FNDC1Q4ZHG4 1894 aaPredicted RBP16.61■□□□□ 0.25
TRAPPC12-210ENST00000441983 HNRNPDLO14979 420 aaKnown RBP16.6■□□□□ 0.25
TRAPPC12-210ENST00000441983 B4GALT5O43286 388 aa16.6■□□□□ 0.25
TRAPPC12-210ENST00000441983 PRR29P0C7W0 189 aa16.6■□□□□ 0.25
TRAPPC12-210ENST00000441983 PROZP22891 400 aa16.6■□□□□ 0.25
TRAPPC12-210ENST00000441983 CASP1P29466 404 aa16.6■□□□□ 0.25
TRAPPC12-210ENST00000441983 PNOCQ13519 176 aa16.6■□□□□ 0.25
TRAPPC12-210ENST00000441983 LRIT3Q3SXY7 679 aa16.6■□□□□ 0.25
TRAPPC12-210ENST00000441983 KMT5BQ4FZB7 885 aa16.6■□□□□ 0.25
TRAPPC12-210ENST00000441983 COBLL1Q53SF7 1204 aa16.6■□□□□ 0.25
TRAPPC12-210ENST00000441983 CRIPAKQ8N1N5 446 aa16.6■□□□□ 0.25
TRAPPC12-210ENST00000441983 ZNF507Q8TCN5 953 aa16.6■□□□□ 0.25
TRAPPC12-210ENST00000441983 SMARCE1Q969G3 411 aa16.6■□□□□ 0.25
TRAPPC12-210ENST00000441983 PGBD4Q96DM1 585 aa16.6■□□□□ 0.25
TRAPPC12-210ENST00000441983 ACCSQ96QU6 501 aa16.6■□□□□ 0.25
TRAPPC12-210ENST00000441983 TRIM6Q9C030 488 aaPredicted RBP16.6■□□□□ 0.25
TRAPPC12-210ENST00000441983 CLSTN2Q9H4D0 955 aa16.6■□□□□ 0.25
TRAPPC12-210ENST00000441983 PDZD7Q9H5P4 517 aa16.6■□□□□ 0.25
TRAPPC12-210ENST00000441983 PTPRHQ9HD43 1115 aa16.6■□□□□ 0.25
TRAPPC12-210ENST00000441983 UBN1Q9NPG3 1134 aa16.6■□□□□ 0.25
TRAPPC12-210ENST00000441983 CXXC1Q9P0U4 656 aaPredicted RBP16.6■□□□□ 0.25
TRAPPC12-210ENST00000441983 CGNQ9P2M7 1197 aaKnown RBP16.6■□□□□ 0.25
TRAPPC12-210ENST00000441983 CITO14578 2027 aa16.59■□□□□ 0.25
TRAPPC12-210ENST00000441983 GJB5O95377 273 aa16.59■□□□□ 0.25
TRAPPC12-210ENST00000441983 MCF2P10911 925 aa16.59■□□□□ 0.25
TRAPPC12-210ENST00000441983 ATP2A2P16615 1042 aaKnown RBP16.59■□□□□ 0.25
TRAPPC12-210ENST00000441983 PPP1R2P41236 205 aa16.59■□□□□ 0.25
TRAPPC12-210ENST00000441983 LIG4P49917 911 aa16.59■□□□□ 0.25
TRAPPC12-210ENST00000441983 HSP90AA2PQ14568 343 aaPredicted RBP16.59■□□□□ 0.25
TRAPPC12-210ENST00000441983 KYAT1Q16773 422 aa16.59■□□□□ 0.25
TRAPPC12-210ENST00000441983 TMEM132AQ24JP5 1023 aa16.59■□□□□ 0.25
TRAPPC12-210ENST00000441983 SLFN12LQ6IEE8 588 aa16.59■□□□□ 0.25
TRAPPC12-210ENST00000441983 MPZL3Q6UWV2 235 aa16.59■□□□□ 0.25
TRAPPC12-210ENST00000441983 RTN4RL1Q86UN2 441 aaPredicted RBP16.59■□□□□ 0.25
TRAPPC12-210ENST00000441983 ECHDC2Q86YB7 292 aa16.59■□□□□ 0.25
TRAPPC12-210ENST00000441983 MYOCDQ8IZQ8 938 aa16.59■□□□□ 0.25
TRAPPC12-210ENST00000441983 TRIML1Q8N9V2 468 aa16.59■□□□□ 0.25
TRAPPC12-210ENST00000441983 BICD1Q96G01 975 aa16.59■□□□□ 0.25
TRAPPC12-210ENST00000441983 CHD9Q3L8U1 2897 aa16.58■□□□□ 0.25
TRAPPC12-210ENST00000441983 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.58■□□□□ 0.24
TRAPPC12-210ENST00000441983 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.58■□□□□ 0.24
TRAPPC12-210ENST00000441983 KIAA0391O15091 583 aaKnown RBP16.58■□□□□ 0.24
TRAPPC12-210ENST00000441983 EDN1P05305 212 aa16.58■□□□□ 0.24
TRAPPC12-210ENST00000441983 CASP5P51878 434 aa16.58■□□□□ 0.24
TRAPPC12-210ENST00000441983 DEFB103AP81534 67 aa16.58■□□□□ 0.24
TRAPPC12-210ENST00000441983 POU5F1Q01860 360 aaKnown RBP16.58■□□□□ 0.24
TRAPPC12-210ENST00000441983 MCL1Q07820 350 aa16.58■□□□□ 0.24
TRAPPC12-210ENST00000441983 NOLC1Q14978 699 aaKnown RBP eCLIP16.58■□□□□ 0.24
TRAPPC12-210ENST00000441983 UBXN11Q5T124 520 aa16.58■□□□□ 0.24
TRAPPC12-210ENST00000441983 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.58■□□□□ 0.24
TRAPPC12-210ENST00000441983 MRPL10Q7Z7H8 261 aaKnown RBP16.58■□□□□ 0.24
TRAPPC12-210ENST00000441983 ZNF598Q86UK7 904 aaKnown RBP16.58■□□□□ 0.24
TRAPPC12-210ENST00000441983 HERC6Q8IVU3 1022 aa16.58■□□□□ 0.24
TRAPPC12-210ENST00000441983 GOLGA5Q8TBA6 731 aa16.58■□□□□ 0.24
TRAPPC12-210ENST00000441983 GPT2Q8TD30 523 aa16.58■□□□□ 0.24
TRAPPC12-210ENST00000441983 TMEM174Q8WUU8 243 aa16.58■□□□□ 0.24
TRAPPC12-210ENST00000441983 CPB2Q96IY4 423 aa16.58■□□□□ 0.24
TRAPPC12-210ENST00000441983 NUP62CLQ9H1M0 184 aa16.58■□□□□ 0.24
TRAPPC12-210ENST00000441983 PCDH10Q9P2E7 1040 aa16.58■□□□□ 0.24
TRAPPC12-210ENST00000441983 LRFN2Q9ULH4 789 aa16.58■□□□□ 0.24
TRAPPC12-210ENST00000441983 PCDHB7Q9Y5E2 793 aa16.58■□□□□ 0.24
TRAPPC12-210ENST00000441983 PCDHB2Q9Y5E7 798 aa16.58■□□□□ 0.24
TRAPPC12-210ENST00000441983 STYXL1Q9Y6J8 313 aa16.58■□□□□ 0.24
TRAPPC12-210ENST00000441983 PDCD11Q14690 1871 aaKnown RBP16.57■□□□□ 0.24
TRAPPC12-210ENST00000441983 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.57■□□□□ 0.24
TRAPPC12-210ENST00000441983 CLDN3O15551 220 aa16.57■□□□□ 0.24
TRAPPC12-210ENST00000441983 MYBP10242 640 aa16.57■□□□□ 0.24
TRAPPC12-210ENST00000441983 HTRA4P83105 476 aaPredicted RBP16.57■□□□□ 0.24
TRAPPC12-210ENST00000441983 SMAD3P84022 425 aaKnown RBP16.57■□□□□ 0.24
TRAPPC12-210ENST00000441983 STK4Q13043 487 aa16.57■□□□□ 0.24
TRAPPC12-210ENST00000441983 RAB30Q15771 203 aa16.57■□□□□ 0.24
TRAPPC12-210ENST00000441983 ZNF568Q3ZCX4 644 aa16.57■□□□□ 0.24
TRAPPC12-210ENST00000441983 ZC2HC1CQ53FD0 456 aaPredicted RBP16.57■□□□□ 0.24
TRAPPC12-210ENST00000441983 ZNF658Q5TYW1 1059 aaPredicted RBP16.57■□□□□ 0.24
TRAPPC12-210ENST00000441983 GUF1Q8N442 669 aaKnown RBP16.57■□□□□ 0.24
TRAPPC12-210ENST00000441983 KIAA0895Q8NCT3 520 aa16.57■□□□□ 0.24
TRAPPC12-210ENST00000441983 SCFD1Q8WVM8 642 aa16.57■□□□□ 0.24
TRAPPC12-210ENST00000441983 TARS2Q9BW92 718 aaKnown RBP16.57■□□□□ 0.24
TRAPPC12-210ENST00000441983 RC3H2Q9HBD1 1191 aaKnown RBP16.57■□□□□ 0.24
TRAPPC12-210ENST00000441983 TBC1D7Q9P0N9 293 aa16.57■□□□□ 0.24
TRAPPC12-210ENST00000441983 KIAA1468Q9P260 1216 aa16.57■□□□□ 0.24
TRAPPC12-210ENST00000441983 COLQQ9Y215 455 aaPredicted RBP16.57■□□□□ 0.24
TRAPPC12-210ENST00000441983 PCDHA5Q9Y5H7 936 aa16.57■□□□□ 0.24
TRAPPC12-210ENST00000441983 TDRD15B5MCY1 1934 aaKnown RBP16.57■□□□□ 0.24
TRAPPC12-210ENST00000441983 CARNS1A5YM72 827 aa16.56■□□□□ 0.24
TRAPPC12-210ENST00000441983 ABLIM1O14639 778 aa16.56■□□□□ 0.24
TRAPPC12-210ENST00000441983 INPPL1O15357 1258 aa16.56■□□□□ 0.24
TRAPPC12-210ENST00000441983 ATF7P17544 494 aaPredicted RBP16.56■□□□□ 0.24
TRAPPC12-210ENST00000441983 GARTP22102 1010 aa16.56■□□□□ 0.24
TRAPPC12-210ENST00000441983 HS2ST1Q7LGA3 356 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms