RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 COLGALT2Q8IYK4 626 aa11.22□□□□□ -0.61
SYN3-204ENST00000441821 GPR65Q8IYL9 337 aa11.22□□□□□ -0.61
SYN3-204ENST00000441821 ZBTB44Q8NCP5 570 aa11.22□□□□□ -0.61
SYN3-204ENST00000441821 RDM1Q8NG50 284 aa11.22□□□□□ -0.61
SYN3-204ENST00000441821 NELL1Q92832 810 aa11.22□□□□□ -0.61
SYN3-204ENST00000441821 SLC5A5Q92911 643 aa11.22□□□□□ -0.61
SYN3-204ENST00000441821 RPP25Q9BUL9 199 aaKnown RBP11.22□□□□□ -0.61
SYN3-204ENST00000441821 LSG1Q9H089 658 aaKnown RBP11.22□□□□□ -0.61
SYN3-204ENST00000441821 EPC1Q9H2F5 836 aa11.22□□□□□ -0.61
SYN3-204ENST00000441821 IFT122Q9HBG6 1241 aa11.22□□□□□ -0.61
SYN3-204ENST00000441821 C6orf50Q9HD87 102 aa11.22□□□□□ -0.61
SYN3-204ENST00000441821 UBN1Q9NPG3 1134 aa11.22□□□□□ -0.61
SYN3-204ENST00000441821 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.22□□□□□ -0.61
SYN3-204ENST00000441821 CHST7Q9NS84 486 aa11.22□□□□□ -0.61
SYN3-204ENST00000441821 FAM217BQ9NTX9 383 aaPredicted RBP11.22□□□□□ -0.61
SYN3-204ENST00000441821 ZSCAN32Q9NX65 697 aa11.22□□□□□ -0.61
SYN3-204ENST00000441821 BRPF3Q9ULD4 1205 aa11.22□□□□□ -0.61
SYN3-204ENST00000441821 PRG3Q9Y2Y8 225 aaPredicted RBP11.22□□□□□ -0.61
SYN3-204ENST00000441821 CACNA1IQ9P0X4 2223 aa11.21□□□□□ -0.61
SYN3-204ENST00000441821 PATJQ8NI35 1801 aa11.21□□□□□ -0.61
SYN3-204ENST00000441821 CHD6Q8TD26 2715 aa11.21□□□□□ -0.61
SYN3-204ENST00000441821 TMEM150BA6NC51 233 aa11.21□□□□□ -0.61
SYN3-204ENST00000441821 FAM170BA6NMN3 283 aa11.21□□□□□ -0.61
SYN3-204ENST00000441821 CHMP2AO43633 222 aa11.21□□□□□ -0.61
SYN3-204ENST00000441821 GAS7O60861 476 aa11.21□□□□□ -0.61
SYN3-204ENST00000441821 LILRB5O75023 590 aa11.21□□□□□ -0.61
SYN3-204ENST00000441821 ADRB1P08588 477 aa11.21□□□□□ -0.61
SYN3-204ENST00000441821 NCLP19338 710 aaKnown RBP11.21□□□□□ -0.61
SYN3-204ENST00000441821 TGM1P22735 817 aa11.21□□□□□ -0.61
SYN3-204ENST00000441821 FSHRP23945 695 aa11.21□□□□□ -0.61
SYN3-204ENST00000441821 GNA11P29992 359 aa11.21□□□□□ -0.61
SYN3-204ENST00000441821 OR1G1P47890 313 aa11.21□□□□□ -0.61
SYN3-204ENST00000441821 MLF2Q15773 248 aaPredicted RBP11.21□□□□□ -0.61
SYN3-204ENST00000441821 SLC44A4Q53GD3 710 aa11.21□□□□□ -0.61
SYN3-204ENST00000441821 UBXN11Q5T124 520 aa11.21□□□□□ -0.61
SYN3-204ENST00000441821 CREB3L3Q68CJ9 461 aa11.21□□□□□ -0.61
SYN3-204ENST00000441821 PARM1Q6UWI2 310 aa11.21□□□□□ -0.61
SYN3-204ENST00000441821 PALB2Q86YC2 1186 aa11.21□□□□□ -0.61
SYN3-204ENST00000441821 CNNM3Q8NE01 707 aa11.21□□□□□ -0.61
SYN3-204ENST00000441821 CCDC12Q8WUD4 166 aaPredicted RBP11.21□□□□□ -0.61
SYN3-204ENST00000441821 FGF14Q92915 247 aa11.21□□□□□ -0.61
SYN3-204ENST00000441821 NLRP4Q96MN2 994 aa11.21□□□□□ -0.61
SYN3-204ENST00000441821 JPH2Q9BR39 696 aaPredicted RBP11.21□□□□□ -0.61
SYN3-204ENST00000441821 TEKT3Q9BXF9 490 aa11.21□□□□□ -0.61
SYN3-204ENST00000441821 UNC45AQ9H3U1 944 aa11.21□□□□□ -0.61
SYN3-204ENST00000441821 PPP4R2Q9NY27 417 aa11.21□□□□□ -0.61
SYN3-204ENST00000441821 FNIP2Q9P278 1114 aa11.21□□□□□ -0.61
SYN3-204ENST00000441821 SMG5Q9UPR3 1016 aaKnown RBP11.21□□□□□ -0.61
SYN3-204ENST00000441821 MTF2Q9Y483 593 aaPredicted RBP11.21□□□□□ -0.61
SYN3-204ENST00000441821 MIA3Q5JRA6 1907 aa11.21□□□□□ -0.62
SYN3-204ENST00000441821 TPRP12270 2363 aaKnown RBP11.2□□□□□ -0.62
SYN3-204ENST00000441821 MTCL1Q9Y4B5 1905 aaKnown RBP11.2□□□□□ -0.62
SYN3-204ENST00000441821 DCDC2BA2VCK2 349 aa11.2□□□□□ -0.62
SYN3-204ENST00000441821 GOLGA8AA7E2F4 631 aa11.2□□□□□ -0.62
SYN3-204ENST00000441821 GOLGA8BA8MQT2 603 aa11.2□□□□□ -0.62
SYN3-204ENST00000441821 EDIL3O43854 480 aa11.2□□□□□ -0.62
SYN3-204ENST00000441821 TBC1D4O60343 1298 aa11.2□□□□□ -0.62
SYN3-204ENST00000441821 NR1I2O75469 434 aa11.2□□□□□ -0.62
SYN3-204ENST00000441821 ZMYND10O75800 440 aa11.2□□□□□ -0.62
SYN3-204ENST00000441821 CDC27P30260 824 aa11.2□□□□□ -0.62
SYN3-204ENST00000441821 HOXA11P31270 313 aaPredicted RBP11.2□□□□□ -0.62
SYN3-204ENST00000441821 USP11P51784 963 aa11.2□□□□□ -0.62
SYN3-204ENST00000441821 RCAN1P53805 252 aa11.2□□□□□ -0.62
SYN3-204ENST00000441821 EXOSC10Q01780 885 aaKnown RBP11.2□□□□□ -0.62
SYN3-204ENST00000441821 PFKPQ01813 784 aa11.2□□□□□ -0.62
SYN3-204ENST00000441821 DSC1Q08554 894 aa11.2□□□□□ -0.62
SYN3-204ENST00000441821 UBXN2BQ14CS0 331 aa11.2□□□□□ -0.62
SYN3-204ENST00000441821 LRCH2Q5VUJ6 765 aa11.2□□□□□ -0.62
SYN3-204ENST00000441821 MTSS1LQ765P7 747 aa11.2□□□□□ -0.62
SYN3-204ENST00000441821 SRGAP1Q7Z6B7 1085 aa11.2□□□□□ -0.62
SYN3-204ENST00000441821 ST13P5Q8NFI4 369 aaPredicted RBP11.2□□□□□ -0.62
SYN3-204ENST00000441821 CCDC136Q96JN2 1154 aa11.2□□□□□ -0.62
SYN3-204ENST00000441821 MBOAT7Q96N66 472 aa11.2□□□□□ -0.62
SYN3-204ENST00000441821 SH2D3AQ9BRG2 576 aa11.2□□□□□ -0.62
SYN3-204ENST00000441821 LTB4R2Q9NPC1 389 aa11.2□□□□□ -0.62
SYN3-204ENST00000441821 CDH7Q9ULB5 785 aa11.2□□□□□ -0.62
SYN3-204ENST00000441821 COL4A3BPQ9Y5P4 624 aa11.2□□□□□ -0.62
SYN3-204ENST00000441821 ASPMQ8IZT6 3477 aa11.19□□□□□ -0.62
SYN3-204ENST00000441821 GPR179Q6PRD1 2367 aa11.19□□□□□ -0.62
SYN3-204ENST00000441821 ARL5CA6NH57 179 aa11.19□□□□□ -0.62
SYN3-204ENST00000441821 DDX11L8A8MPP1 907 aa11.19□□□□□ -0.62
SYN3-204ENST00000441821 PSMD10O75832 226 aa11.19□□□□□ -0.62
SYN3-204ENST00000441821 ITGA4P13612 1032 aa11.19□□□□□ -0.62
SYN3-204ENST00000441821 CREMQ03060 361 aa11.19□□□□□ -0.62
SYN3-204ENST00000441821 USP41Q3LFD5 358 aa11.19□□□□□ -0.62
SYN3-204ENST00000441821 ZBTB41Q5SVQ8 909 aa11.19□□□□□ -0.62
SYN3-204ENST00000441821 B3GNT9Q6UX72 402 aa11.19□□□□□ -0.62
SYN3-204ENST00000441821 ANO5Q75V66 913 aa11.19□□□□□ -0.62
SYN3-204ENST00000441821 MIER3Q7Z3K6 550 aa11.19□□□□□ -0.62
SYN3-204ENST00000441821 SMG8Q8ND04 991 aaKnown RBP11.19□□□□□ -0.62
SYN3-204ENST00000441821 BICD2Q8TD16 824 aa11.19□□□□□ -0.62
SYN3-204ENST00000441821 CLDN23Q96B33 292 aa11.19□□□□□ -0.62
SYN3-204ENST00000441821 NELL2Q99435 816 aa11.19□□□□□ -0.62
SYN3-204ENST00000441821 COLEC11Q9BWP8 271 aa11.19□□□□□ -0.62
SYN3-204ENST00000441821 FAM126AQ9BYI3 521 aaPredicted RBP11.19□□□□□ -0.62
SYN3-204ENST00000441821 USP18Q9UMW8 372 aa11.19□□□□□ -0.62
SYN3-204ENST00000441821 MYH15Q9Y2K3 1946 aa11.19□□□□□ -0.62
SYN3-204ENST00000441821 KLF18A0A0U1RQI7 1052 aa11.18□□□□□ -0.62
SYN3-204ENST00000441821 CCDC196A0A1B0GTZ2 297 aa11.18□□□□□ -0.62
SYN3-204ENST00000441821 F8W810 466 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms