RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 DHX36Q9H2U1 1008 aaKnown RBP12.8□□□□□ -0.36
LTBR-203ENST00000441074 SEMA4AQ9H3S1 761 aa12.8□□□□□ -0.36
LTBR-203ENST00000441074 FGFR1OP2Q9NVK5 253 aa12.8□□□□□ -0.36
LTBR-203ENST00000441074 PRKAG3Q9UGI9 489 aa12.8□□□□□ -0.36
LTBR-203ENST00000441074 SNX24Q9Y343 169 aa12.8□□□□□ -0.36
LTBR-203ENST00000441074 TCP11X1B4DZS4 312 aa12.79□□□□□ -0.36
LTBR-203ENST00000441074 E7ENQ6 273 aa12.79□□□□□ -0.36
LTBR-203ENST00000441074 SLC37A4O43826 429 aa12.79□□□□□ -0.36
LTBR-203ENST00000441074 HIP1RO75146 1068 aa12.79□□□□□ -0.36
LTBR-203ENST00000441074 GNAZP19086 355 aa12.79□□□□□ -0.36
LTBR-203ENST00000441074 ECE1P42892 770 aa12.79□□□□□ -0.36
LTBR-203ENST00000441074 CCDC38Q502W7 563 aa12.79□□□□□ -0.36
LTBR-203ENST00000441074 CMPK2Q5EBM0 449 aa12.79□□□□□ -0.36
LTBR-203ENST00000441074 HYIQ5T013 277 aa12.79□□□□□ -0.36
LTBR-203ENST00000441074 KCNK18Q7Z418 384 aa12.79□□□□□ -0.36
LTBR-203ENST00000441074 MFN1Q8IWA4 741 aa12.79□□□□□ -0.36
LTBR-203ENST00000441074 EPS8L3Q8TE67 593 aaKnown RBP12.79□□□□□ -0.36
LTBR-203ENST00000441074 RAB3IPQ96QF0 476 aaPredicted RBP12.79□□□□□ -0.36
LTBR-203ENST00000441074 CARD9Q9H257 536 aa12.79□□□□□ -0.36
LTBR-203ENST00000441074 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.79□□□□□ -0.36
LTBR-203ENST00000441074 TMEM260Q9NX78 707 aa12.79□□□□□ -0.36
LTBR-203ENST00000441074 FZD1Q9UP38 647 aa12.79□□□□□ -0.36
LTBR-203ENST00000441074 A0A1W2PRG0 241 aa12.79□□□□□ -0.36
LTBR-203ENST00000441074 POTEMA6NI47 508 aa12.79□□□□□ -0.36
LTBR-203ENST00000441074 USP17L10C9JJH3 530 aa12.79□□□□□ -0.36
LTBR-203ENST00000441074 FZD9O00144 591 aa12.79□□□□□ -0.36
LTBR-203ENST00000441074 PPP1R11O60927 126 aaPredicted RBP12.79□□□□□ -0.36
LTBR-203ENST00000441074 SLC9A1P19634 815 aa12.79□□□□□ -0.36
LTBR-203ENST00000441074 CTCFP49711 727 aaPredicted RBP12.79□□□□□ -0.36
LTBR-203ENST00000441074 MAPK7Q13164 816 aa12.79□□□□□ -0.36
LTBR-203ENST00000441074 ADAM9Q13443 819 aa12.79□□□□□ -0.36
LTBR-203ENST00000441074 PRAMEF18Q5VWM3 479 aa12.79□□□□□ -0.36
LTBR-203ENST00000441074 CWF19L1Q69YN2 538 aaKnown RBP12.79□□□□□ -0.36
LTBR-203ENST00000441074 SPATA21Q7Z572 469 aa12.79□□□□□ -0.36
LTBR-203ENST00000441074 CCDC65Q8IXS2 484 aa12.79□□□□□ -0.36
LTBR-203ENST00000441074 ADGRF4Q8IZF3 695 aa12.79□□□□□ -0.36
LTBR-203ENST00000441074 FITM2Q8N6M3 262 aa12.79□□□□□ -0.36
LTBR-203ENST00000441074 DYDC1Q8WWB3 177 aa12.79□□□□□ -0.36
LTBR-203ENST00000441074 GLG1Q92896 1179 aa12.79□□□□□ -0.36
LTBR-203ENST00000441074 UIMC1Q96RL1 719 aa12.79□□□□□ -0.36
LTBR-203ENST00000441074 ROPN1BQ9BZX4 212 aaPredicted RBP12.79□□□□□ -0.36
LTBR-203ENST00000441074 KCTD10Q9H3F6 313 aa12.79□□□□□ -0.36
LTBR-203ENST00000441074 ROPN1Q9HAT0 212 aaPredicted RBP12.79□□□□□ -0.36
LTBR-203ENST00000441074 ARHGEF10LQ9HCE6 1279 aa12.79□□□□□ -0.36
LTBR-203ENST00000441074 GRHL1Q9NZI5 618 aa12.79□□□□□ -0.36
LTBR-203ENST00000441074 MTRF1LQ9UGC7 380 aaKnown RBP12.79□□□□□ -0.36
LTBR-203ENST00000441074 PARP2Q9UGN5 583 aa12.79□□□□□ -0.36
LTBR-203ENST00000441074 PNMA3Q9UL41 463 aa12.79□□□□□ -0.36
LTBR-203ENST00000441074 DDX3XO00571 662 aaKnown RBP eCLIP12.78□□□□□ -0.36
LTBR-203ENST00000441074 CETN3O15182 167 aa12.78□□□□□ -0.36
LTBR-203ENST00000441074 TDP2O95551 362 aa12.78□□□□□ -0.36
LTBR-203ENST00000441074 PAPOLAP51003 745 aaKnown RBP12.78□□□□□ -0.36
LTBR-203ENST00000441074 ZYXQ15942 572 aaKnown RBP12.78□□□□□ -0.36
LTBR-203ENST00000441074 ABCB5Q2M3G0 1257 aa12.78□□□□□ -0.36
LTBR-203ENST00000441074 EDRF1Q3B7T1 1238 aa12.78□□□□□ -0.36
LTBR-203ENST00000441074 DCAF12L1Q5VU92 463 aa12.78□□□□□ -0.36
LTBR-203ENST00000441074 TATDN1Q6P1N9 297 aa12.78□□□□□ -0.36
LTBR-203ENST00000441074 SAMD1Q6SPF0 538 aaPredicted RBP12.78□□□□□ -0.36
LTBR-203ENST00000441074 EXOC3L1Q86VI1 746 aa12.78□□□□□ -0.36
LTBR-203ENST00000441074 NELFCDQ8IXH7 590 aa12.78□□□□□ -0.36
LTBR-203ENST00000441074 RBM46Q8TBY0 533 aaKnown RBP12.78□□□□□ -0.36
LTBR-203ENST00000441074 TSC22D3Q99576 134 aa12.78□□□□□ -0.36
LTBR-203ENST00000441074 NUDT12Q9BQG2 462 aa12.78□□□□□ -0.36
LTBR-203ENST00000441074 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.78□□□□□ -0.36
LTBR-203ENST00000441074 HDAC9Q9UKV0 1011 aa12.78□□□□□ -0.36
LTBR-203ENST00000441074 PCDHA2Q9Y5H9 948 aa12.78□□□□□ -0.36
LTBR-203ENST00000441074 CNTNAP1P78357 1384 aa12.78□□□□□ -0.36
LTBR-203ENST00000441074 DPPA5A6NC42 116 aa12.78□□□□□ -0.36
LTBR-203ENST00000441074 RIPK2O43353 540 aa12.78□□□□□ -0.36
LTBR-203ENST00000441074 GFPT2O94808 682 aa12.78□□□□□ -0.36
LTBR-203ENST00000441074 PON1P27169 355 aa12.78□□□□□ -0.36
LTBR-203ENST00000441074 PTGIRP43119 386 aa12.78□□□□□ -0.36
LTBR-203ENST00000441074 SLCO1A2P46721 670 aa12.78□□□□□ -0.36
LTBR-203ENST00000441074 RPS6KA3P51812 740 aa12.78□□□□□ -0.36
LTBR-203ENST00000441074 GALCP54803 685 aa12.78□□□□□ -0.36
LTBR-203ENST00000441074 MRPS35P82673 323 aaKnown RBP12.78□□□□□ -0.36
LTBR-203ENST00000441074 PPATQ06203 517 aa12.78□□□□□ -0.36
LTBR-203ENST00000441074 CCDC15Q0P6D6 951 aa12.78□□□□□ -0.36
LTBR-203ENST00000441074 TBC1D10BQ4KMP7 808 aaPredicted RBP12.78□□□□□ -0.36
LTBR-203ENST00000441074 CIAPIN1Q6FI81 312 aa12.78□□□□□ -0.36
LTBR-203ENST00000441074 ANO7Q6IWH7 933 aa12.78□□□□□ -0.36
LTBR-203ENST00000441074 U2AF1L4Q8WU68 220 aaKnown RBP12.78□□□□□ -0.36
LTBR-203ENST00000441074 CCDC113Q9H0I3 377 aa12.78□□□□□ -0.36
LTBR-203ENST00000441074 JMJD4Q9H9V9 463 aa12.78□□□□□ -0.36
LTBR-203ENST00000441074 ERVK-5Q9HDB9 667 aa12.78□□□□□ -0.36
LTBR-203ENST00000441074 PAPOLBQ9NRJ5 636 aaKnown RBP12.78□□□□□ -0.36
LTBR-203ENST00000441074 DBR1Q9UK59 544 aaKnown RBP12.78□□□□□ -0.36
LTBR-203ENST00000441074 TRIM33Q9UPN9 1127 aa12.78□□□□□ -0.36
LTBR-203ENST00000441074 NCANO14594 1321 aa12.78□□□□□ -0.36
LTBR-203ENST00000441074 LRRD1A4D1F6 860 aa12.77□□□□□ -0.36
LTBR-203ENST00000441074 NPTXRO95502 500 aa12.77□□□□□ -0.36
LTBR-203ENST00000441074 RARGP13631 454 aa12.77□□□□□ -0.36
LTBR-203ENST00000441074 ROR2Q01974 943 aaKnown RBP12.77□□□□□ -0.36
LTBR-203ENST00000441074 ZNF543Q08ER8 600 aa12.77□□□□□ -0.36
LTBR-203ENST00000441074 MKRN3Q13064 507 aaKnown RBP12.77□□□□□ -0.36
LTBR-203ENST00000441074 PRPF4BQ13523 1007 aaKnown RBP12.77□□□□□ -0.36
LTBR-203ENST00000441074 LBRQ14739 615 aaKnown RBP12.77□□□□□ -0.36
LTBR-203ENST00000441074 EXOC3L4Q17RC7 722 aa12.77□□□□□ -0.36
LTBR-203ENST00000441074 PARP6Q2NL67 630 aa12.77□□□□□ -0.36
LTBR-203ENST00000441074 NUGGCQ68CJ6 796 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms