RNA–Protein interactions for RNA: ENST00000440925.1

PLOD3-205, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 4

Gene PLOD3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-205ENST00000440925 A0A0B4J269 797 aa16.32■□□□□ 0.2
PLOD3-205ENST00000440925 H0YCG3 227 aa16.32■□□□□ 0.2
PLOD3-205ENST00000440925 GPR182O15218 404 aa16.32■□□□□ 0.2
PLOD3-205ENST00000440925 STX17P56962 302 aa16.32■□□□□ 0.2
PLOD3-205ENST00000440925 ALCAMQ13740 583 aa16.32■□□□□ 0.2
PLOD3-205ENST00000440925 ATF7IP2Q5U623 682 aa16.32■□□□□ 0.2
PLOD3-205ENST00000440925 ZPBP2Q6X784 338 aa16.32■□□□□ 0.2
PLOD3-205ENST00000440925 GAS2L3Q86XJ1 694 aa16.32■□□□□ 0.2
PLOD3-205ENST00000440925 TMEM192Q8IY95 271 aa16.32■□□□□ 0.2
PLOD3-205ENST00000440925 SMG8Q8ND04 991 aaKnown RBP16.32■□□□□ 0.2
PLOD3-205ENST00000440925 TMEM174Q8WUU8 243 aa16.32■□□□□ 0.2
PLOD3-205ENST00000440925 DHTKD1Q96HY7 919 aaPredicted RBP16.32■□□□□ 0.2
PLOD3-205ENST00000440925 AGPAT3Q9NRZ7 376 aa16.32■□□□□ 0.2
PLOD3-205ENST00000440925 MEIS3P2A8K0S8 358 aa16.31■□□□□ 0.2
PLOD3-205ENST00000440925 PDXKO00764 312 aa16.31■□□□□ 0.2
PLOD3-205ENST00000440925 SCP2P22307 547 aa16.31■□□□□ 0.2
PLOD3-205ENST00000440925 CCNE1P24864 410 aa16.31■□□□□ 0.2
PLOD3-205ENST00000440925 ZNF445P59923 1031 aa16.31■□□□□ 0.2
PLOD3-205ENST00000440925 MCL1Q07820 350 aa16.31■□□□□ 0.2
PLOD3-205ENST00000440925 PAK2Q13177 524 aa16.31■□□□□ 0.2
PLOD3-205ENST00000440925 NCAPHQ15003 741 aa16.31■□□□□ 0.2
PLOD3-205ENST00000440925 PCBP1Q15365 356 aaKnown RBP eCLIP16.31■□□□□ 0.2
PLOD3-205ENST00000440925 SEZ6Q53EL9 994 aa16.31■□□□□ 0.2
PLOD3-205ENST00000440925 SASS6Q6UVJ0 657 aa16.31■□□□□ 0.2
PLOD3-205ENST00000440925 ZBTB33Q86T24 672 aa16.31■□□□□ 0.2
PLOD3-205ENST00000440925 IRF2BP1Q8IU81 584 aa16.31■□□□□ 0.2
PLOD3-205ENST00000440925 ZC3H3Q8IXZ2 948 aaKnown RBP16.31■□□□□ 0.2
PLOD3-205ENST00000440925 CEP120Q8N960 986 aa16.31■□□□□ 0.2
PLOD3-205ENST00000440925 NELFBQ8WX92 580 aa16.31■□□□□ 0.2
PLOD3-205ENST00000440925 P2RX5Q93086 422 aa16.31■□□□□ 0.2
PLOD3-205ENST00000440925 CCDC47Q96A33 483 aaKnown RBP16.31■□□□□ 0.2
PLOD3-205ENST00000440925 ADAM2Q99965 735 aa16.31■□□□□ 0.2
PLOD3-205ENST00000440925 MRPL4Q9BYD3 311 aaKnown RBP16.31■□□□□ 0.2
PLOD3-205ENST00000440925 IFIH1Q9BYX4 1025 aaKnown RBP16.31■□□□□ 0.2
PLOD3-205ENST00000440925 DNAJC25Q9H1X3 360 aa16.31■□□□□ 0.2
PLOD3-205ENST00000440925 CDT1Q9H211 546 aa16.31■□□□□ 0.2
PLOD3-205ENST00000440925 HSD3B7Q9H2F3 369 aa16.31■□□□□ 0.2
PLOD3-205ENST00000440925 PCIF1Q9H4Z3 704 aa16.31■□□□□ 0.2
PLOD3-205ENST00000440925 TMEM206Q9H813 350 aa16.31■□□□□ 0.2
PLOD3-205ENST00000440925 CHST12Q9NRB3 414 aa16.31■□□□□ 0.2
PLOD3-205ENST00000440925 RGS18Q9NS28 235 aa16.31■□□□□ 0.2
PLOD3-205ENST00000440925 UBE4BO95155 1302 aa16.3■□□□□ 0.2
PLOD3-205ENST00000440925 C9IYK1 514 aa16.3■□□□□ 0.2
PLOD3-205ENST00000440925 TOM1L1O75674 476 aa16.3■□□□□ 0.2
PLOD3-205ENST00000440925 ATF7P17544 494 aaPredicted RBP16.3■□□□□ 0.2
PLOD3-205ENST00000440925 SFPQP23246 707 aaKnown RBP eCLIP16.3■□□□□ 0.2
PLOD3-205ENST00000440925 AXLP30530 894 aa16.3■□□□□ 0.2
PLOD3-205ENST00000440925 RFC2P35250 354 aa16.3■□□□□ 0.2
PLOD3-205ENST00000440925 WNT7BP56706 349 aa16.3■□□□□ 0.2
PLOD3-205ENST00000440925 MCCD1P59942 119 aaPredicted RBP16.3■□□□□ 0.2
PLOD3-205ENST00000440925 STRN3Q13033 797 aa16.3■□□□□ 0.2
PLOD3-205ENST00000440925 IQCB1Q15051 598 aa16.3■□□□□ 0.2
PLOD3-205ENST00000440925 ANO6Q4KMQ2 910 aa16.3■□□□□ 0.2
PLOD3-205ENST00000440925 TMEM240Q5SV17 173 aa16.3■□□□□ 0.2
PLOD3-205ENST00000440925 KLHL10Q6JEL2 608 aa16.3■□□□□ 0.2
PLOD3-205ENST00000440925 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.3■□□□□ 0.24e-11■■■■■ 83
PLOD3-205ENST00000440925 MRPL10Q7Z7H8 261 aaKnown RBP16.3■□□□□ 0.2
PLOD3-205ENST00000440925 ZNF598Q86UK7 904 aaKnown RBP16.3■□□□□ 0.2
PLOD3-205ENST00000440925 EEF2KMTQ96G04 330 aa16.3■□□□□ 0.2
PLOD3-205ENST00000440925 TRAIPQ9BWF2 469 aa16.3■□□□□ 0.2
PLOD3-205ENST00000440925 GBP3Q9H0R5 595 aa16.3■□□□□ 0.2
PLOD3-205ENST00000440925 TSPYL2Q9H2G4 693 aaPredicted RBP16.3■□□□□ 0.2
PLOD3-205ENST00000440925 IL23AQ9NPF7 189 aa16.3■□□□□ 0.2
PLOD3-205ENST00000440925 TYW1Q9NV66 732 aaKnown RBP16.3■□□□□ 0.2
PLOD3-205ENST00000440925 CTNND2Q9UQB3 1225 aa16.3■□□□□ 0.2
PLOD3-205ENST00000440925 HES2Q9Y543 173 aa16.3■□□□□ 0.2
PLOD3-205ENST00000440925 LTBP2Q14767 1821 aa16.29■□□□□ 0.2
PLOD3-205ENST00000440925 CAPN15O75808 1086 aa16.29■□□□□ 0.2
PLOD3-205ENST00000440925 PARNO95453 639 aaKnown RBP16.29■□□□□ 0.2
PLOD3-205ENST00000440925 NPTXRO95502 500 aa16.29■□□□□ 0.2
PLOD3-205ENST00000440925 TNFSF9P41273 254 aa16.29■□□□□ 0.2
PLOD3-205ENST00000440925 CASP4P49662 377 aa16.29■□□□□ 0.2
PLOD3-205ENST00000440925 NFIL3Q16649 462 aa16.29■□□□□ 0.2
PLOD3-205ENST00000440925 SCARA3Q6AZY7 606 aa16.29■□□□□ 0.2
PLOD3-205ENST00000440925 LRSAM1Q6UWE0 723 aa16.29■□□□□ 0.2
PLOD3-205ENST00000440925 LRRC55Q6ZSA7 311 aa16.29■□□□□ 0.2
PLOD3-205ENST00000440925 ZNF365Q70YC5 407 aa16.29■□□□□ 0.2
PLOD3-205ENST00000440925 C12orf56Q8IXR9 622 aa16.29■□□□□ 0.2
PLOD3-205ENST00000440925 TMEM199Q8N511 208 aa16.29■□□□□ 0.2
PLOD3-205ENST00000440925 PLEKHO2Q8TD55 490 aa16.29■□□□□ 0.2
PLOD3-205ENST00000440925 BORCS6Q96GS4 357 aa16.29■□□□□ 0.2
PLOD3-205ENST00000440925 FBXL18Q96ME1 805 aa16.29■□□□□ 0.2
PLOD3-205ENST00000440925 GTPBP4Q9BZE4 634 aaKnown RBP16.29■□□□□ 0.2
PLOD3-205ENST00000440925 RNF19AQ9NV58 838 aa16.29■□□□□ 0.2
PLOD3-205ENST00000440925 ANO10Q9NW15 660 aa16.29■□□□□ 0.2
PLOD3-205ENST00000440925 RWDD2AQ9UIY3 292 aa16.29■□□□□ 0.2
PLOD3-205ENST00000440925 PIN4Q9Y237 131 aaKnown RBP16.29■□□□□ 0.2
PLOD3-205ENST00000440925 GOLGA8IPA6NC78 632 aa16.28■□□□□ 0.2
PLOD3-205ENST00000440925 GOLGA8JA6NMD2 632 aa16.28■□□□□ 0.2
PLOD3-205ENST00000440925 H0YGN5 161 aa16.28■□□□□ 0.2
PLOD3-205ENST00000440925 ZNF623O75123 536 aa16.28■□□□□ 0.2
PLOD3-205ENST00000440925 ERLIN2O94905 339 aa16.28■□□□□ 0.2
PLOD3-205ENST00000440925 GARTP22102 1010 aa16.28■□□□□ 0.2
PLOD3-205ENST00000440925 ERCC5P28715 1186 aaPredicted RBP16.28■□□□□ 0.2
PLOD3-205ENST00000440925 LIG4P49917 911 aa16.28■□□□□ 0.2
PLOD3-205ENST00000440925 AFF1P51825 1210 aaKnown RBP16.28■□□□□ 0.2
PLOD3-205ENST00000440925 STX1AQ16623 288 aa16.28■□□□□ 0.2
PLOD3-205ENST00000440925 CNKSR3Q6P9H4 555 aa16.28■□□□□ 0.2
PLOD3-205ENST00000440925 SLC27A1Q6PCB7 646 aa16.28■□□□□ 0.2
PLOD3-205ENST00000440925 MPZL3Q6UWV2 235 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms