RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 TSPAN1O60635 241 aa12.93□□□□□ -0.34
UBE2D4-204ENST00000440899 LILRB3O75022 631 aa12.93□□□□□ -0.34
UBE2D4-204ENST00000440899 LARGE1O95461 756 aa12.93□□□□□ -0.34
UBE2D4-204ENST00000440899 POMCP01189 267 aa12.93□□□□□ -0.34
UBE2D4-204ENST00000440899 WEE2P0C1S8 567 aa12.93□□□□□ -0.34
UBE2D4-204ENST00000440899 XRCC6P12956 609 aaKnown RBP eCLIP12.93□□□□□ -0.34
UBE2D4-204ENST00000440899 ARL2P36404 184 aa12.93□□□□□ -0.34
UBE2D4-204ENST00000440899 TXKP42681 527 aa12.93□□□□□ -0.34
UBE2D4-204ENST00000440899 NEK4P51957 841 aa12.93□□□□□ -0.34
UBE2D4-204ENST00000440899 KANK3Q6NY19 840 aa12.93□□□□□ -0.34
UBE2D4-204ENST00000440899 ZDHHC14Q8IZN3 488 aa12.93□□□□□ -0.34
UBE2D4-204ENST00000440899 PRSS33Q8NF86 280 aa12.93□□□□□ -0.34
UBE2D4-204ENST00000440899 KLHL5Q96PQ7 755 aa12.93□□□□□ -0.34
UBE2D4-204ENST00000440899 MTMR9Q96QG7 549 aa12.93□□□□□ -0.34
UBE2D4-204ENST00000440899 EIF2AQ9BY44 585 aaKnown RBP12.93□□□□□ -0.34
UBE2D4-204ENST00000440899 NFKBIZQ9BYH8 718 aa12.93□□□□□ -0.34
UBE2D4-204ENST00000440899 MRPL17Q9NRX2 175 aaKnown RBP12.93□□□□□ -0.34
UBE2D4-204ENST00000440899 DBR1Q9UK59 544 aaKnown RBP12.93□□□□□ -0.34
UBE2D4-204ENST00000440899 SSX2IPQ9Y2D8 614 aa12.93□□□□□ -0.34
UBE2D4-204ENST00000440899 IPPQ9Y573 584 aa12.93□□□□□ -0.34
UBE2D4-204ENST00000440899 SPDYE4A6NLX3 237 aa12.92□□□□□ -0.34
UBE2D4-204ENST00000440899 NR1I2O75469 434 aa12.92□□□□□ -0.34
UBE2D4-204ENST00000440899 SOD2P04179 222 aa12.92□□□□□ -0.34
UBE2D4-204ENST00000440899 SSBP05455 408 aaKnown RBP eCLIP12.92□□□□□ -0.34
UBE2D4-204ENST00000440899 CNPP09543 421 aaKnown RBP12.92□□□□□ -0.34
UBE2D4-204ENST00000440899 AVPR2P30518 371 aa12.92□□□□□ -0.34
UBE2D4-204ENST00000440899 OR1G1P47890 313 aa12.92□□□□□ -0.34
UBE2D4-204ENST00000440899 RARRES1P49788 294 aa12.92□□□□□ -0.34
UBE2D4-204ENST00000440899 CLCN4P51793 760 aa12.92□□□□□ -0.34
UBE2D4-204ENST00000440899 MTMR3Q13615 1198 aa12.92□□□□□ -0.34
UBE2D4-204ENST00000440899 CAPSQ13938 189 aa12.92□□□□□ -0.34
UBE2D4-204ENST00000440899 AMHR2Q16671 573 aa12.92□□□□□ -0.34
UBE2D4-204ENST00000440899 TMC5Q6UXY8 1006 aa12.92□□□□□ -0.34
UBE2D4-204ENST00000440899 GPR149Q86SP6 731 aa12.92□□□□□ -0.34
UBE2D4-204ENST00000440899 HACE1Q8IYU2 909 aa12.92□□□□□ -0.34
UBE2D4-204ENST00000440899 TDRD5Q8NAT2 981 aaKnown RBP12.92□□□□□ -0.34
UBE2D4-204ENST00000440899 ASAP3Q8TDY4 903 aa12.92□□□□□ -0.34
UBE2D4-204ENST00000440899 PIGOQ8TEQ8 1089 aa12.92□□□□□ -0.34
UBE2D4-204ENST00000440899 CPB2Q96IY4 423 aa12.92□□□□□ -0.34
UBE2D4-204ENST00000440899 GAD1Q99259 594 aa12.92□□□□□ -0.34
UBE2D4-204ENST00000440899 TRIM6Q9C030 488 aaPredicted RBP12.92□□□□□ -0.34
UBE2D4-204ENST00000440899 RNF39Q9H2S5 420 aa12.92□□□□□ -0.34
UBE2D4-204ENST00000440899 SFXN1Q9H9B4 322 aa12.92□□□□□ -0.34
UBE2D4-204ENST00000440899 LIMD1Q9UGP4 676 aa12.92□□□□□ -0.34
UBE2D4-204ENST00000440899 GIT1Q9Y2X7 761 aa12.92□□□□□ -0.34
UBE2D4-204ENST00000440899 CACNA1HO95180 2353 aa12.92□□□□□ -0.34
UBE2D4-204ENST00000440899 JAK2O60674 1132 aa12.91□□□□□ -0.34
UBE2D4-204ENST00000440899 BRD1O95696 1058 aa12.91□□□□□ -0.34
UBE2D4-204ENST00000440899 URODP06132 367 aa12.91□□□□□ -0.34
UBE2D4-204ENST00000440899 ARF4P18085 180 aaPredicted RBP12.91□□□□□ -0.34
UBE2D4-204ENST00000440899 GLRA2P23416 452 aa12.91□□□□□ -0.34
UBE2D4-204ENST00000440899 MLH1P40692 756 aa12.91□□□□□ -0.34
UBE2D4-204ENST00000440899 MBTD1Q05BQ5 628 aa12.91□□□□□ -0.34
UBE2D4-204ENST00000440899 DSC1Q08554 894 aa12.91□□□□□ -0.34
UBE2D4-204ENST00000440899 SAFBQ15424 915 aaKnown RBP eCLIP12.91□□□□□ -0.34
UBE2D4-204ENST00000440899 ERICH6BQ5W0A0 696 aa12.91□□□□□ -0.34
UBE2D4-204ENST00000440899 COLGALT2Q8IYK4 626 aa12.91□□□□□ -0.34
UBE2D4-204ENST00000440899 ACSF2Q96CM8 615 aaPredicted RBP12.91□□□□□ -0.34
UBE2D4-204ENST00000440899 RPS6KC1Q96S38 1066 aa12.91□□□□□ -0.34
UBE2D4-204ENST00000440899 DPP7Q9UHL4 492 aa12.91□□□□□ -0.34
UBE2D4-204ENST00000440899 PRG3Q9Y2Y8 225 aaPredicted RBP12.91□□□□□ -0.34
UBE2D4-204ENST00000440899 HES2Q9Y543 173 aa12.91□□□□□ -0.34
UBE2D4-204ENST00000440899 A0A1B0GUA9 196 aa12.9□□□□□ -0.34
UBE2D4-204ENST00000440899 WNT7AO00755 349 aa12.9□□□□□ -0.34
UBE2D4-204ENST00000440899 ADH1AP07327 375 aa12.9□□□□□ -0.34
UBE2D4-204ENST00000440899 SPATA31C1P0DKV0 1188 aa12.9□□□□□ -0.34
UBE2D4-204ENST00000440899 SCNN1GP51170 649 aa12.9□□□□□ -0.34
UBE2D4-204ENST00000440899 NUBP1P53384 320 aa12.9□□□□□ -0.34
UBE2D4-204ENST00000440899 FOSBP53539 338 aa12.9□□□□□ -0.34
UBE2D4-204ENST00000440899 VCPP55072 806 aaKnown RBP12.9□□□□□ -0.34
UBE2D4-204ENST00000440899 SLC27A1Q6PCB7 646 aa12.9□□□□□ -0.34
UBE2D4-204ENST00000440899 ELMSAN1Q6PJG2 1045 aa12.9□□□□□ -0.34
UBE2D4-204ENST00000440899 C15orf39Q6ZRI6 1047 aa12.9□□□□□ -0.34
UBE2D4-204ENST00000440899 OTOP3Q7RTS5 596 aa12.9□□□□□ -0.34
UBE2D4-204ENST00000440899 TAS1R1Q7RTX1 841 aa12.9□□□□□ -0.34
UBE2D4-204ENST00000440899 MCPH1Q8NEM0 835 aa12.9□□□□□ -0.34
UBE2D4-204ENST00000440899 ZFP42Q96MM3 310 aa12.9□□□□□ -0.34
UBE2D4-204ENST00000440899 HERC2P3Q9BVR0 1158 aa12.9□□□□□ -0.34
UBE2D4-204ENST00000440899 COLEC11Q9BWP8 271 aa12.9□□□□□ -0.34
UBE2D4-204ENST00000440899 APOL6Q9BWW8 343 aa12.9□□□□□ -0.34
UBE2D4-204ENST00000440899 IRF2BPLQ9H1B7 796 aa12.9□□□□□ -0.34
UBE2D4-204ENST00000440899 POLR3FQ9H1D9 316 aaPredicted RBP12.9□□□□□ -0.34
UBE2D4-204ENST00000440899 NXF3Q9H4D5 531 aaKnown RBP12.9□□□□□ -0.34
UBE2D4-204ENST00000440899 TUFT1Q9NNX1 390 aa12.9□□□□□ -0.34
UBE2D4-204ENST00000440899 MARCH5Q9NX47 278 aa12.9□□□□□ -0.34
UBE2D4-204ENST00000440899 MIOSQ9NXC5 875 aa12.9□□□□□ -0.34
UBE2D4-204ENST00000440899 USP34Q70CQ2 3546 aa12.9□□□□□ -0.34
UBE2D4-204ENST00000440899 MYO10Q9HD67 2058 aa12.9□□□□□ -0.34
UBE2D4-204ENST00000440899 A0A087WWV3 80 aa12.89□□□□□ -0.35
UBE2D4-204ENST00000440899 POTEMA6NI47 508 aa12.89□□□□□ -0.35
UBE2D4-204ENST00000440899 LRRIQ4A6NIV6 560 aa12.89□□□□□ -0.35
UBE2D4-204ENST00000440899 C2CD2LO14523 706 aa12.89□□□□□ -0.35
UBE2D4-204ENST00000440899 B4GALT5O43286 388 aa12.89□□□□□ -0.35
UBE2D4-204ENST00000440899 USO1O60763 962 aaKnown RBP12.89□□□□□ -0.35
UBE2D4-204ENST00000440899 EFEMP2O95967 443 aa12.89□□□□□ -0.35
UBE2D4-204ENST00000440899 PDGFBP01127 241 aaPredicted RBP12.89□□□□□ -0.35
UBE2D4-204ENST00000440899 ASGR2P07307 311 aa12.89□□□□□ -0.35
UBE2D4-204ENST00000440899 ATP2B1P20020 1258 aa12.89□□□□□ -0.35
UBE2D4-204ENST00000440899 MCM7P33993 719 aa12.89□□□□□ -0.35
UBE2D4-204ENST00000440899 GLUD2P49448 558 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms