RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 ZNF572Q7Z3I7 529 aaPredicted RBP9.95□□□□□ -0.82
HDAC6-209ENST00000440653 USP37Q86T82 979 aa9.95□□□□□ -0.82
HDAC6-209ENST00000440653 SYCP3Q8IZU3 236 aa9.95□□□□□ -0.82
HDAC6-209ENST00000440653 KRT222Q8N1A0 295 aa9.95□□□□□ -0.82
HDAC6-209ENST00000440653 MCPH1Q8NEM0 835 aa9.95□□□□□ -0.82
HDAC6-209ENST00000440653 DNERQ8NFT8 737 aa9.95□□□□□ -0.82
HDAC6-209ENST00000440653 KIFAP3Q92845 792 aa9.95□□□□□ -0.82
HDAC6-209ENST00000440653 UIMC1Q96RL1 719 aa9.95□□□□□ -0.82
HDAC6-209ENST00000440653 MPHOSPH6Q99547 160 aaKnown RBP9.95□□□□□ -0.82
HDAC6-209ENST00000440653 IRX2Q9BZI1 471 aaPredicted RBP9.95□□□□□ -0.82
HDAC6-209ENST00000440653 DMAC2Q9NW81 257 aa9.95□□□□□ -0.82
HDAC6-209ENST00000440653 HYOU1Q9Y4L1 999 aa9.95□□□□□ -0.82
HDAC6-209ENST00000440653 IGSF9BQ9UPX0 1349 aa9.95□□□□□ -0.82
HDAC6-209ENST00000440653 DOCK5Q9H7D0 1870 aa9.95□□□□□ -0.82
HDAC6-209ENST00000440653 PLXNA1Q9UIW2 1896 aa9.95□□□□□ -0.82
HDAC6-209ENST00000440653 ZDBF2Q9HCK1 2354 aa9.95□□□□□ -0.82
HDAC6-209ENST00000440653 FRMPD3Q5JV73 1810 aa9.94□□□□□ -0.82
HDAC6-209ENST00000440653 A0A0G2JLL6 359 aaPredicted RBP9.94□□□□□ -0.82
HDAC6-209ENST00000440653 TARSL2A2RTX5 802 aaKnown RBP9.94□□□□□ -0.82
HDAC6-209ENST00000440653 SPDYE16A6NNV3 312 aaPredicted RBP9.94□□□□□ -0.82
HDAC6-209ENST00000440653 PRR33A8MZF0 331 aa9.94□□□□□ -0.82
HDAC6-209ENST00000440653 DDX39AO00148 427 aaKnown RBP9.94□□□□□ -0.82
HDAC6-209ENST00000440653 PMM2O15305 246 aa9.94□□□□□ -0.82
HDAC6-209ENST00000440653 TLL1O43897 1013 aa9.94□□□□□ -0.82
HDAC6-209ENST00000440653 PSAPP07602 524 aa9.94□□□□□ -0.82
HDAC6-209ENST00000440653 UCHL3P15374 230 aa9.94□□□□□ -0.82
HDAC6-209ENST00000440653 NMT1P30419 496 aaKnown RBP9.94□□□□□ -0.82
HDAC6-209ENST00000440653 MAGEA1P43355 309 aa9.94□□□□□ -0.82
HDAC6-209ENST00000440653 CLCN6P51797 869 aa9.94□□□□□ -0.82
HDAC6-209ENST00000440653 SMTNP53814 917 aa9.94□□□□□ -0.82
HDAC6-209ENST00000440653 FOXK2Q01167 660 aa9.94□□□□□ -0.82
HDAC6-209ENST00000440653 BFSP1Q12934 665 aa9.94□□□□□ -0.82
HDAC6-209ENST00000440653 DMP1Q13316 513 aaPredicted RBP9.94□□□□□ -0.82
HDAC6-209ENST00000440653 MAP9Q49MG5 647 aa9.94□□□□□ -0.82
HDAC6-209ENST00000440653 KLHDC7AQ5VTJ3 777 aa9.94□□□□□ -0.82
HDAC6-209ENST00000440653 CATSPERGQ6ZRH7 1159 aa9.94□□□□□ -0.82
HDAC6-209ENST00000440653 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.94□□□□□ -0.82
HDAC6-209ENST00000440653 PRRT2Q7Z6L0 340 aaPredicted RBP9.94□□□□□ -0.82
HDAC6-209ENST00000440653 VSIG10LQ86VR7 867 aa9.94□□□□□ -0.82
HDAC6-209ENST00000440653 MICALL1Q8N3F8 863 aa9.94□□□□□ -0.82
HDAC6-209ENST00000440653 MSL3Q8N5Y2 521 aaKnown RBP9.94□□□□□ -0.82
HDAC6-209ENST00000440653 PROCA1Q8NCQ7 364 aaPredicted RBP9.94□□□□□ -0.82
HDAC6-209ENST00000440653 LRRN4CLQ8ND94 238 aa9.94□□□□□ -0.82
HDAC6-209ENST00000440653 HNRNPLLQ8WVV9 542 aaKnown RBP9.94□□□□□ -0.82
HDAC6-209ENST00000440653 KCNN1Q92952 543 aa9.94□□□□□ -0.82
HDAC6-209ENST00000440653 CALR3Q96L12 384 aaKnown RBP9.94□□□□□ -0.82
HDAC6-209ENST00000440653 TAAR1Q96RJ0 339 aa9.94□□□□□ -0.82
HDAC6-209ENST00000440653 MOV10L1Q9BXT6 1211 aaKnown RBP9.94□□□□□ -0.82
HDAC6-209ENST00000440653 JPH1Q9HDC5 661 aaPredicted RBP9.94□□□□□ -0.82
HDAC6-209ENST00000440653 NLRC4Q9NPP4 1024 aa9.94□□□□□ -0.82
HDAC6-209ENST00000440653 PDLIM7Q9NR12 457 aa9.94□□□□□ -0.82
HDAC6-209ENST00000440653 HOXC10Q9NYD6 342 aa9.94□□□□□ -0.82
HDAC6-209ENST00000440653 WRAP73Q9P2S5 460 aaPredicted RBP9.94□□□□□ -0.82
HDAC6-209ENST00000440653 RNF14Q9UBS8 474 aa9.94□□□□□ -0.82
HDAC6-209ENST00000440653 INTUQ9ULD6 942 aa9.94□□□□□ -0.82
HDAC6-209ENST00000440653 PPME1Q9Y570 386 aa9.94□□□□□ -0.82
HDAC6-209ENST00000440653 PCDHA10Q9Y5I2 948 aa9.94□□□□□ -0.82
HDAC6-209ENST00000440653 ZNF263O14978 683 aa9.93□□□□□ -0.82
HDAC6-209ENST00000440653 KIAA0391O15091 583 aaKnown RBP9.93□□□□□ -0.82
HDAC6-209ENST00000440653 NKRFO15226 690 aaKnown RBP eCLIP9.93□□□□□ -0.82
HDAC6-209ENST00000440653 EXOC3O60645 756 aa9.93□□□□□ -0.82
HDAC6-209ENST00000440653 DGAT1O75907 488 aa9.93□□□□□ -0.82
HDAC6-209ENST00000440653 KRT37O76014 449 aa9.93□□□□□ -0.82
HDAC6-209ENST00000440653 NR3C2P08235 984 aa9.93□□□□□ -0.82
HDAC6-209ENST00000440653 MYCLP12524 364 aaPredicted RBP9.93□□□□□ -0.82
HDAC6-209ENST00000440653 PON1P27169 355 aa9.93□□□□□ -0.82
HDAC6-209ENST00000440653 FMO5P49326 533 aa9.93□□□□□ -0.82
HDAC6-209ENST00000440653 JAM2P57087 298 aa9.93□□□□□ -0.82
HDAC6-209ENST00000440653 FAM193AP78312 1265 aa9.93□□□□□ -0.82
HDAC6-209ENST00000440653 GTF2BQ00403 316 aa9.93□□□□□ -0.82
HDAC6-209ENST00000440653 NAA30Q147X3 362 aaPredicted RBP9.93□□□□□ -0.82
HDAC6-209ENST00000440653 FAM110CQ1W6H9 321 aa9.93□□□□□ -0.82
HDAC6-209ENST00000440653 TRIM60Q495X7 471 aa9.93□□□□□ -0.82
HDAC6-209ENST00000440653 LBX2Q6XYB7 198 aa9.93□□□□□ -0.82
HDAC6-209ENST00000440653 FASTKD5Q7L8L6 764 aaKnown RBP9.93□□□□□ -0.82
HDAC6-209ENST00000440653 MAP4K3Q8IVH8 894 aa9.93□□□□□ -0.82
HDAC6-209ENST00000440653 DAW1Q8N136 415 aa9.93□□□□□ -0.82
HDAC6-209ENST00000440653 CAGE1Q8TC20 777 aa9.93□□□□□ -0.82
HDAC6-209ENST00000440653 UBE2Q2Q8WVN8 375 aa9.93□□□□□ -0.82
HDAC6-209ENST00000440653 SPIRE2Q8WWL2 714 aa9.93□□□□□ -0.82
HDAC6-209ENST00000440653 BORCS6Q96GS4 357 aa9.93□□□□□ -0.82
HDAC6-209ENST00000440653 PBX4Q9BYU1 374 aa9.93□□□□□ -0.82
HDAC6-209ENST00000440653 LACRTQ9GZZ8 138 aa9.93□□□□□ -0.82
HDAC6-209ENST00000440653 ARFGAP3Q9NP61 516 aa9.93□□□□□ -0.82
HDAC6-209ENST00000440653 CYP39A1Q9NYL5 469 aa9.93□□□□□ -0.82
HDAC6-209ENST00000440653 RAB21Q9UL25 225 aa9.93□□□□□ -0.82
HDAC6-209ENST00000440653 SNX12Q9UMY4 172 aa9.93□□□□□ -0.82
HDAC6-209ENST00000440653 AFG3L2Q9Y4W6 797 aa9.93□□□□□ -0.82
HDAC6-209ENST00000440653 PCDHGC5Q9Y5F6 944 aa9.93□□□□□ -0.82
HDAC6-209ENST00000440653 A0A0A6YYK5 440 aaPredicted RBP9.92□□□□□ -0.82
HDAC6-209ENST00000440653 LOC102724159A0A0B4J2E5 919 aa9.92□□□□□ -0.82
HDAC6-209ENST00000440653 A0A0U1RQJ8 604 aa9.92□□□□□ -0.82
HDAC6-209ENST00000440653 MACROD2A1Z1Q3 448 aa9.92□□□□□ -0.82
HDAC6-209ENST00000440653 CES2O00748 559 aa9.92□□□□□ -0.82
HDAC6-209ENST00000440653 ZRANB2O95218 330 aaKnown RBP eCLIP9.92□□□□□ -0.82
HDAC6-209ENST00000440653 ATP1A1P05023 1023 aaKnown RBP9.92□□□□□ -0.82
HDAC6-209ENST00000440653 PLEKP08567 350 aaPredicted RBP9.92□□□□□ -0.82
HDAC6-209ENST00000440653 KCNA2P16389 499 aa9.92□□□□□ -0.82
HDAC6-209ENST00000440653 ICAM3P32942 547 aa9.92□□□□□ -0.82
HDAC6-209ENST00000440653 STAT1P42224 750 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms