RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 SLC16A11Q8NCK7 471 aa4.33□□□□□ -1.72
HMGB3P11-201ENST00000440127 SHCBP1Q8NEM2 672 aa4.33□□□□□ -1.72
HMGB3P11-201ENST00000440127 RUNDC1Q96C34 613 aa4.33□□□□□ -1.72
HMGB3P11-201ENST00000440127 SCLYQ96I15 445 aa4.33□□□□□ -1.72
HMGB3P11-201ENST00000440127 ZNF747Q9BV97 191 aa4.33□□□□□ -1.72
HMGB3P11-201ENST00000440127 CSRNP2Q9H175 543 aa4.33□□□□□ -1.72
HMGB3P11-201ENST00000440127 SLKQ9H2G2 1235 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P11-201ENST00000440127 INTS7Q9NVH2 962 aaKnown RBP4.33□□□□□ -1.72
HMGB3P11-201ENST00000440127 KCMF1Q9P0J7 381 aa4.33□□□□□ -1.72
HMGB3P11-201ENST00000440127 POGKQ9P215 609 aa4.33□□□□□ -1.72
HMGB3P11-201ENST00000440127 MAGEC2Q9UBF1 373 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P11-201ENST00000440127 CDC42EP3Q9UKI2 254 aa4.33□□□□□ -1.72
HMGB3P11-201ENST00000440127 ZKSCAN5Q9Y2L8 839 aa4.33□□□□□ -1.72
HMGB3P11-201ENST00000440127 SIGLEC1Q9BZZ2 1709 aa4.32□□□□□ -1.72
HMGB3P11-201ENST00000440127 MYOM1P52179 1685 aa4.32□□□□□ -1.72
HMGB3P11-201ENST00000440127 DIP2BQ9P265 1576 aa4.32□□□□□ -1.72
HMGB3P11-201ENST00000440127 REREQ9P2R6 1566 aa4.32□□□□□ -1.72
HMGB3P11-201ENST00000440127 NSD2O96028 1365 aa4.32□□□□□ -1.72
HMGB3P11-201ENST00000440127 ANKRD36BQ8N2N9 1353 aa4.32□□□□□ -1.72
HMGB3P11-201ENST00000440127 NINLQ9Y2I6 1382 aa4.32□□□□□ -1.72
HMGB3P11-201ENST00000440127 A0A1W2PRX2 142 aa4.32□□□□□ -1.72
HMGB3P11-201ENST00000440127 TCERG1O14776 1098 aaKnown RBP4.32□□□□□ -1.72
HMGB3P11-201ENST00000440127 AKAP8O43823 692 aaKnown RBP4.32□□□□□ -1.72
HMGB3P11-201ENST00000440127 PLIN1O60240 522 aa4.32□□□□□ -1.72
HMGB3P11-201ENST00000440127 RFPL3O75679 317 aa4.32□□□□□ -1.72
HMGB3P11-201ENST00000440127 VIL1P09327 827 aaKnown RBP4.32□□□□□ -1.72
HMGB3P11-201ENST00000440127 MCM7P33993 719 aa4.32□□□□□ -1.72
HMGB3P11-201ENST00000440127 HMGA2P52926 109 aa4.32□□□□□ -1.72
HMGB3P11-201ENST00000440127 SAFB2Q14151 953 aaKnown RBP eCLIP4.32□□□□□ -1.72
HMGB3P11-201ENST00000440127 EPHA7Q15375 998 aa4.32□□□□□ -1.72
HMGB3P11-201ENST00000440127 MAN2A1Q16706 1144 aa4.32□□□□□ -1.72
HMGB3P11-201ENST00000440127 PLEKHG6Q3KR16 790 aa4.32□□□□□ -1.72
HMGB3P11-201ENST00000440127 GAGE13Q4V321 117 aa4.32□□□□□ -1.72
HMGB3P11-201ENST00000440127 SLFN12LQ6IEE8 588 aa4.32□□□□□ -1.72
HMGB3P11-201ENST00000440127 LRSAM1Q6UWE0 723 aa4.32□□□□□ -1.72
HMGB3P11-201ENST00000440127 D2HGDHQ8N465 521 aa4.32□□□□□ -1.72
HMGB3P11-201ENST00000440127 C7orf31Q8N865 590 aa4.32□□□□□ -1.72
HMGB3P11-201ENST00000440127 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.32□□□□□ -1.72
HMGB3P11-201ENST00000440127 OR5AN1Q8NGI8 311 aa4.32□□□□□ -1.72
HMGB3P11-201ENST00000440127 RABGGTAQ92696 567 aa4.32□□□□□ -1.72
HMGB3P11-201ENST00000440127 MAML3Q96JK9 1138 aa4.32□□□□□ -1.72
HMGB3P11-201ENST00000440127 WWC2-AS2Q96NR7 200 aa4.32□□□□□ -1.72
HMGB3P11-201ENST00000440127 SORCS2Q96PQ0 1159 aa4.32□□□□□ -1.72
HMGB3P11-201ENST00000440127 PRAM1Q96QH2 718 aa4.32□□□□□ -1.72
HMGB3P11-201ENST00000440127 SLC6A15Q9H2J7 730 aa4.32□□□□□ -1.72
HMGB3P11-201ENST00000440127 TERF2IPQ9NYB0 399 aa4.32□□□□□ -1.72
HMGB3P11-201ENST00000440127 PLA2G3Q9NZ20 509 aa4.32□□□□□ -1.72
HMGB3P11-201ENST00000440127 GIT1Q9Y2X7 761 aa4.32□□□□□ -1.72
HMGB3P11-201ENST00000440127 YTHDC2Q9H6S0 1430 aaKnown RBP4.31□□□□□ -1.72
HMGB3P11-201ENST00000440127 PTPDC1A2A3K4 754 aa4.31□□□□□ -1.72
HMGB3P11-201ENST00000440127 GOLGA8BA8MQT2 603 aa4.31□□□□□ -1.72
HMGB3P11-201ENST00000440127 CAPN14A8MX76 684 aa4.31□□□□□ -1.72
HMGB3P11-201ENST00000440127 PPP1R12AO14974 1030 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P11-201ENST00000440127 DAPK3O43293 454 aa4.31□□□□□ -1.72
HMGB3P11-201ENST00000440127 GAS7O60861 476 aa4.31□□□□□ -1.72
HMGB3P11-201ENST00000440127 PARNO95453 639 aaKnown RBP4.31□□□□□ -1.72
HMGB3P11-201ENST00000440127 PRLP01236 227 aa4.31□□□□□ -1.72
HMGB3P11-201ENST00000440127 AMHP03971 560 aa4.31□□□□□ -1.72
HMGB3P11-201ENST00000440127 MSX2P35548 267 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P11-201ENST00000440127 TNNT2P45379 298 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P11-201ENST00000440127 MASP1P48740 699 aa4.31□□□□□ -1.72
HMGB3P11-201ENST00000440127 MTHFSP49914 203 aa4.31□□□□□ -1.72
HMGB3P11-201ENST00000440127 STAT5BP51692 787 aa4.31□□□□□ -1.72
HMGB3P11-201ENST00000440127 PURAQ00577 322 aaKnown RBP4.31□□□□□ -1.72
HMGB3P11-201ENST00000440127 SLC6A3Q01959 620 aa4.31□□□□□ -1.72
HMGB3P11-201ENST00000440127 OCRLQ01968 901 aa4.31□□□□□ -1.72
HMGB3P11-201ENST00000440127 PTH1RQ03431 593 aa4.31□□□□□ -1.72
HMGB3P11-201ENST00000440127 CRHR2Q13324 411 aa4.31□□□□□ -1.72
HMGB3P11-201ENST00000440127 FOXE3Q13461 319 aa4.31□□□□□ -1.72
HMGB3P11-201ENST00000440127 GRM7Q14831 915 aa4.31□□□□□ -1.72
HMGB3P11-201ENST00000440127 SEC23AQ15436 765 aa4.31□□□□□ -1.72
HMGB3P11-201ENST00000440127 TCEA2Q15560 299 aa4.31□□□□□ -1.72
HMGB3P11-201ENST00000440127 USP39Q53GS9 565 aaKnown RBP4.31□□□□□ -1.72
HMGB3P11-201ENST00000440127 MIIPQ5JXC2 388 aa4.31□□□□□ -1.72
HMGB3P11-201ENST00000440127 PRAMEF9Q5VWM5 478 aa4.31□□□□□ -1.72
HMGB3P11-201ENST00000440127 LARP4Q71RC2 724 aaKnown RBP eCLIP4.31□□□□□ -1.72
HMGB3P11-201ENST00000440127 NOL8Q76FK4 1167 aaKnown RBP4.31□□□□□ -1.72
HMGB3P11-201ENST00000440127 HDGFL2Q7Z4V5 671 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P11-201ENST00000440127 BMP8AQ7Z5Y6 402 aa4.31□□□□□ -1.72
HMGB3P11-201ENST00000440127 FGD2Q7Z6J4 655 aa4.31□□□□□ -1.72
HMGB3P11-201ENST00000440127 SGMS1Q86VZ5 419 aa4.31□□□□□ -1.72
HMGB3P11-201ENST00000440127 WDR63Q8IWG1 891 aa4.31□□□□□ -1.72
HMGB3P11-201ENST00000440127 OR14K1Q8NGZ2 314 aa4.31□□□□□ -1.72
HMGB3P11-201ENST00000440127 ANP32EQ9BTT0 268 aa4.31□□□□□ -1.72
HMGB3P11-201ENST00000440127 CDK19Q9BWU1 502 aa4.31□□□□□ -1.72
HMGB3P11-201ENST00000440127 POLR3BQ9NW08 1133 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P11-201ENST00000440127 PARPBPQ9NWS1 579 aa4.31□□□□□ -1.72
HMGB3P11-201ENST00000440127 DDX56Q9NY93 547 aaKnown RBP4.31□□□□□ -1.72
HMGB3P11-201ENST00000440127 DENND2AQ9ULE3 1009 aa4.31□□□□□ -1.72
HMGB3P11-201ENST00000440127 QRICH2Q9H0J4 1663 aa4.31□□□□□ -1.72
HMGB3P11-201ENST00000440127 TMEM131LA2VDJ0 1609 aa4.31□□□□□ -1.72
HMGB3P11-201ENST00000440127 TULP4Q9NRJ4 1543 aa4.31□□□□□ -1.72
HMGB3P11-201ENST00000440127 RIMS2Q9UQ26 1411 aa4.3□□□□□ -1.72
HMGB3P11-201ENST00000440127 PREX1Q8TCU6 1659 aa4.3□□□□□ -1.72
HMGB3P11-201ENST00000440127 PPFIA4O75335 1185 aa4.3□□□□□ -1.72
HMGB3P11-201ENST00000440127 GLRX3O76003 335 aaKnown RBP4.3□□□□□ -1.72
HMGB3P11-201ENST00000440127 HIBADHP31937 336 aaKnown RBP4.3□□□□□ -1.72
HMGB3P11-201ENST00000440127 ACVRL1P37023 503 aa4.3□□□□□ -1.72
HMGB3P11-201ENST00000440127 MECP2P51608 486 aaKnown RBP4.3□□□□□ -1.72
HMGB3P11-201ENST00000440127 HGFACQ04756 655 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms