RNA–Protein interactions for RNA: ENST00000439936.6

COPS3-203, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5 BASIC

Gene COPS3, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-203ENST00000439936 PRPF31Q8WWY3 499 aaKnown RBP8.3□□□□□ -1.08
COPS3-203ENST00000439936 SLC7A3Q8WY07 619 aa8.3□□□□□ -1.08
COPS3-203ENST00000439936 ZNF592Q92610 1267 aa8.3□□□□□ -1.08
COPS3-203ENST00000439936 TMEM143Q96AN5 459 aa8.3□□□□□ -1.08
COPS3-203ENST00000439936 MAP7D2Q96T17 732 aa8.3□□□□□ -1.08
COPS3-203ENST00000439936 CCSER1Q9C0I3 900 aa8.3□□□□□ -1.08
COPS3-203ENST00000439936 BHMT2Q9H2M3 363 aa8.3□□□□□ -1.08
COPS3-203ENST00000439936 AGO3Q9H9G7 860 aaKnown RBP8.3□□□□□ -1.08
COPS3-203ENST00000439936 BCCIPQ9P287 314 aaKnown RBP eCLIP8.3□□□□□ -1.08
COPS3-203ENST00000439936 CFAP45Q9UL16 551 aa8.3□□□□□ -1.08
COPS3-203ENST00000439936 GINS2Q9Y248 185 aa8.3□□□□□ -1.08
COPS3-203ENST00000439936 NOC2LQ9Y3T9 749 aaKnown RBP8.3□□□□□ -1.08
COPS3-203ENST00000439936 A0A087WZ62 844 aa8.29□□□□□ -1.08
COPS3-203ENST00000439936 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.29□□□□□ -1.08
COPS3-203ENST00000439936 ABHD14A-ACY1A0A1B0GW23 586 aa8.29□□□□□ -1.08
COPS3-203ENST00000439936 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.29□□□□□ -1.08
COPS3-203ENST00000439936 ARHGEF35A5YM69 484 aa8.29□□□□□ -1.08
COPS3-203ENST00000439936 ENPP3O14638 875 aa8.29□□□□□ -1.08
COPS3-203ENST00000439936 ASAP2O43150 1006 aa8.29□□□□□ -1.08
COPS3-203ENST00000439936 SLC26A4O43511 780 aa8.29□□□□□ -1.08
COPS3-203ENST00000439936 GAS2O43903 313 aaKnown RBP8.29□□□□□ -1.08
COPS3-203ENST00000439936 USO1O60763 962 aaKnown RBP8.29□□□□□ -1.08
COPS3-203ENST00000439936 CSDE1O75534 798 aaKnown RBP8.29□□□□□ -1.08
COPS3-203ENST00000439936 ACTN1P12814 892 aa8.29□□□□□ -1.08
COPS3-203ENST00000439936 CYP11B2P19099 503 aa8.29□□□□□ -1.08
COPS3-203ENST00000439936 CD52P31358 61 aa8.29□□□□□ -1.08
COPS3-203ENST00000439936 ARL2P36404 184 aa8.29□□□□□ -1.08
COPS3-203ENST00000439936 GPC3P51654 580 aa8.29□□□□□ -1.08
COPS3-203ENST00000439936 NUCB2P80303 420 aa8.29□□□□□ -1.08
COPS3-203ENST00000439936 CDC42EP1Q00587 391 aa8.29□□□□□ -1.08
COPS3-203ENST00000439936 EMC2Q15006 297 aa8.29□□□□□ -1.08
COPS3-203ENST00000439936 KARSQ15046 597 aaKnown RBP8.29□□□□□ -1.08
COPS3-203ENST00000439936 PSRC1Q6PGN9 363 aaPredicted RBP8.29□□□□□ -1.08
COPS3-203ENST00000439936 TSHZ1Q6ZSZ6 1077 aa8.29□□□□□ -1.08
COPS3-203ENST00000439936 MAEAQ7L5Y9 396 aa8.29□□□□□ -1.08
COPS3-203ENST00000439936 RHPN2Q8IUC4 686 aa8.29□□□□□ -1.08
COPS3-203ENST00000439936 USP38Q8NB14 1042 aa8.29□□□□□ -1.08
COPS3-203ENST00000439936 TMEM40Q8WWA1 233 aa8.29□□□□□ -1.08
COPS3-203ENST00000439936 TCP11Q8WWU5 503 aa8.29□□□□□ -1.08
COPS3-203ENST00000439936 SEPT8Q92599 483 aa8.29□□□□□ -1.08
COPS3-203ENST00000439936 CALML4Q96GE6 196 aa8.29□□□□□ -1.08
COPS3-203ENST00000439936 RNPC3Q96LT9 517 aaKnown RBP8.29□□□□□ -1.08
COPS3-203ENST00000439936 OSMRQ99650 979 aa8.29□□□□□ -1.08
COPS3-203ENST00000439936 FDXACB1Q9BRP7 624 aaPredicted RBP8.29□□□□□ -1.08
COPS3-203ENST00000439936 PANK2Q9BZ23 570 aa8.29□□□□□ -1.08
COPS3-203ENST00000439936 NT5C3AQ9H0P0 336 aa8.29□□□□□ -1.08
COPS3-203ENST00000439936 DNMT3LQ9UJW3 386 aa8.29□□□□□ -1.08
COPS3-203ENST00000439936 PADI3Q9ULW8 664 aa8.29□□□□□ -1.08
COPS3-203ENST00000439936 PCDHA7Q9UN72 937 aa8.29□□□□□ -1.08
COPS3-203ENST00000439936 RBM19Q9Y4C8 960 aaKnown RBP8.29□□□□□ -1.08
COPS3-203ENST00000439936 MYH11P35749 1972 aa8.28□□□□□ -1.08
COPS3-203ENST00000439936 GRXCR1A8MXD5 290 aa8.28□□□□□ -1.08
COPS3-203ENST00000439936 CUTAO60888 179 aa8.28□□□□□ -1.08
COPS3-203ENST00000439936 RPS6KA5O75582 802 aa8.28□□□□□ -1.08
COPS3-203ENST00000439936 SRGAP2CP0DJJ0 459 aa8.28□□□□□ -1.08
COPS3-203ENST00000439936 BMP2P12643 396 aa8.28□□□□□ -1.08
COPS3-203ENST00000439936 EIF4BP23588 611 aaKnown RBP8.28□□□□□ -1.08
COPS3-203ENST00000439936 ANP32AP39687 249 aaKnown RBP8.28□□□□□ -1.08
COPS3-203ENST00000439936 GSK3AP49840 483 aa8.28□□□□□ -1.08
COPS3-203ENST00000439936 LAMTOR4Q0VGL1 99 aa8.28□□□□□ -1.08
COPS3-203ENST00000439936 LRIT3Q3SXY7 679 aa8.28□□□□□ -1.08
COPS3-203ENST00000439936 TMEM119Q4V9L6 283 aa8.28□□□□□ -1.08
COPS3-203ENST00000439936 AXDND1Q5T1B0 1012 aaPredicted RBP8.28□□□□□ -1.08
COPS3-203ENST00000439936 FAM109BQ6ICB4 259 aaPredicted RBP8.28□□□□□ -1.08
COPS3-203ENST00000439936 RINT1Q6NUQ1 792 aa8.28□□□□□ -1.08
COPS3-203ENST00000439936 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.28□□□□□ -1.088e-7■■□□□ 12.7
COPS3-203ENST00000439936 C1orf186Q6ZWK4 172 aa8.28□□□□□ -1.08
COPS3-203ENST00000439936 SYT2Q8N9I0 419 aaPredicted RBP8.28□□□□□ -1.08
COPS3-203ENST00000439936 LRRC15Q8TF66 581 aa8.28□□□□□ -1.08
COPS3-203ENST00000439936 PSPC1Q8WXF1 523 aaKnown RBP8.28□□□□□ -1.08
COPS3-203ENST00000439936 CDK5RAP3Q96JB5 506 aa8.28□□□□□ -1.08
COPS3-203ENST00000439936 CCDC43Q96MW1 224 aaKnown RBP8.28□□□□□ -1.08
COPS3-203ENST00000439936 IFIH1Q9BYX4 1025 aaKnown RBP8.28□□□□□ -1.08
COPS3-203ENST00000439936 ATP6V0A4Q9HBG4 840 aa8.28□□□□□ -1.08
COPS3-203ENST00000439936 IFT122Q9HBG6 1241 aa8.28□□□□□ -1.08
COPS3-203ENST00000439936 ERVK-5Q9HDB9 667 aa8.28□□□□□ -1.08
COPS3-203ENST00000439936 GPRC5CQ9NQ84 441 aa8.28□□□□□ -1.08
COPS3-203ENST00000439936 BLOC1S4Q9NUP1 217 aa8.28□□□□□ -1.08
COPS3-203ENST00000439936 ST3GAL5Q9UNP4 418 aa8.28□□□□□ -1.08
COPS3-203ENST00000439936 COL4A3BPQ9Y5P4 624 aa8.28□□□□□ -1.08
COPS3-203ENST00000439936 SLC4A7Q9Y6M7 1214 aa8.28□□□□□ -1.08
COPS3-203ENST00000439936 MICAL3Q7RTP6 2002 aa8.28□□□□□ -1.08
COPS3-203ENST00000439936 TTC3P53804 2025 aa8.27□□□□□ -1.09
COPS3-203ENST00000439936 PTPRSQ13332 1948 aa8.27□□□□□ -1.09
COPS3-203ENST00000439936 A0A087X0B3 334 aa8.27□□□□□ -1.09
COPS3-203ENST00000439936 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.27□□□□□ -1.09
COPS3-203ENST00000439936 SFI1A8K8P3 1242 aa8.27□□□□□ -1.09
COPS3-203ENST00000439936 SOX1O00570 391 aaPredicted RBP8.27□□□□□ -1.09
COPS3-203ENST00000439936 GPR182O15218 404 aa8.27□□□□□ -1.09
COPS3-203ENST00000439936 BAIAP3O94812 1187 aa8.27□□□□□ -1.09
COPS3-203ENST00000439936 PLA2G4BP0C869 781 aa8.27□□□□□ -1.09
COPS3-203ENST00000439936 DARSP14868 501 aaKnown RBP8.27□□□□□ -1.09
COPS3-203ENST00000439936 PLCG1P19174 1290 aa8.27□□□□□ -1.09
COPS3-203ENST00000439936 FGFR4P22455 802 aa8.27□□□□□ -1.09
COPS3-203ENST00000439936 GLRA2P23416 452 aa8.27□□□□□ -1.09
COPS3-203ENST00000439936 SLC12A3P55017 1021 aa8.27□□□□□ -1.09
COPS3-203ENST00000439936 WDR5P61964 334 aaKnown RBP8.27□□□□□ -1.09
COPS3-203ENST00000439936 POU5F1BQ06416 359 aa8.27□□□□□ -1.09
COPS3-203ENST00000439936 DHX8Q14562 1220 aaKnown RBP8.27□□□□□ -1.09
COPS3-203ENST00000439936 MXD4Q14582 209 aaPredicted RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms