RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 ADAM7Q9H2U9 754 aa16.57■□□□□ 0.24
APP-208ENST00000439274 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.57■□□□□ 0.24
APP-208ENST00000439274 RASAL2Q9UJF2 1139 aa16.57■□□□□ 0.24
APP-208ENST00000439274 SERPINA10Q9UK55 444 aa16.57■□□□□ 0.24
APP-208ENST00000439274 TCP10L2B9ZVM9 353 aa16.56■□□□□ 0.24
APP-208ENST00000439274 RASSF9O75901 435 aa16.56■□□□□ 0.24
APP-208ENST00000439274 CHRNB2P17787 502 aa16.56■□□□□ 0.24
APP-208ENST00000439274 KCNJ1P48048 391 aa16.56■□□□□ 0.24
APP-208ENST00000439274 PEX5P50542 639 aa16.56■□□□□ 0.24
APP-208ENST00000439274 SMTNP53814 917 aa16.56■□□□□ 0.24
APP-208ENST00000439274 CCDC137Q6PK04 289 aaKnown RBP16.56■□□□□ 0.24
APP-208ENST00000439274 NOP9Q86U38 636 aaKnown RBP16.56■□□□□ 0.24
APP-208ENST00000439274 EPS8L3Q8TE67 593 aaKnown RBP16.56■□□□□ 0.24
APP-208ENST00000439274 CHMP6Q96FZ7 201 aa16.56■□□□□ 0.24
APP-208ENST00000439274 MASTLQ96GX5 879 aa16.56■□□□□ 0.24
APP-208ENST00000439274 WDR11Q9BZH6 1224 aa16.56■□□□□ 0.24
APP-208ENST00000439274 FAM129AQ9BZQ8 928 aa16.56■□□□□ 0.24
APP-208ENST00000439274 PDGFDQ9GZP0 370 aaPredicted RBP16.56■□□□□ 0.24
APP-208ENST00000439274 CNOT10Q9H9A5 744 aaKnown RBP16.56■□□□□ 0.24
APP-208ENST00000439274 KLC4Q9NSK0 619 aa16.56■□□□□ 0.24
APP-208ENST00000439274 FBXO28Q9NVF7 368 aa16.56■□□□□ 0.24
APP-208ENST00000439274 ZBTB21Q9ULJ3 1066 aa16.56■□□□□ 0.24
APP-208ENST00000439274 TMEM150BA6NC51 233 aa16.56■□□□□ 0.24
APP-208ENST00000439274 GOLGA8IPA6NC78 632 aa16.56■□□□□ 0.24
APP-208ENST00000439274 GOLGA8JA6NMD2 632 aa16.56■□□□□ 0.24
APP-208ENST00000439274 MMEP08473 750 aa16.56■□□□□ 0.24
APP-208ENST00000439274 CTNNA2P26232 953 aa16.56■□□□□ 0.24
APP-208ENST00000439274 CHRNA3P32297 505 aa16.56■□□□□ 0.24
APP-208ENST00000439274 EPC2Q52LR7 807 aa16.56■□□□□ 0.24
APP-208ENST00000439274 SPDYCQ5MJ68 293 aa16.56■□□□□ 0.24
APP-208ENST00000439274 B3GNT9Q6UX72 402 aa16.56■□□□□ 0.24
APP-208ENST00000439274 INTS8Q75QN2 995 aaKnown RBP16.56■□□□□ 0.24
APP-208ENST00000439274 HAUS2Q9NVX0 235 aa16.56■□□□□ 0.24
APP-208ENST00000439274 KCND2Q9NZV8 630 aa16.56■□□□□ 0.24
APP-208ENST00000439274 PCDHA3Q9Y5H8 950 aa16.56■□□□□ 0.24
APP-208ENST00000439274 MIF4GDA9UHW6 222 aaKnown RBP16.55■□□□□ 0.24
APP-208ENST00000439274 NPM3O75607 178 aaKnown RBP16.55■□□□□ 0.24
APP-208ENST00000439274 ITGB5P18084 799 aa16.55■□□□□ 0.24
APP-208ENST00000439274 HADHBP55084 474 aaKnown RBP16.55■□□□□ 0.24
APP-208ENST00000439274 GRIPAP1Q4V328 841 aa16.55■□□□□ 0.24
APP-208ENST00000439274 SLC47A2Q86VL8 602 aa16.55■□□□□ 0.24
APP-208ENST00000439274 FMNL3Q8IVF7 1028 aa16.55■□□□□ 0.24
APP-208ENST00000439274 MTFR1LQ9H019 292 aa16.55■□□□□ 0.24
APP-208ENST00000439274 ATRNL1Q5VV63 1379 aa16.55■□□□□ 0.24
APP-208ENST00000439274 RGS16O15492 202 aaPredicted RBP16.55■□□□□ 0.24
APP-208ENST00000439274 CYP26A1O43174 497 aa16.55■□□□□ 0.24
APP-208ENST00000439274 RFX1P22670 979 aa16.55■□□□□ 0.24
APP-208ENST00000439274 PDE6BP35913 854 aa16.55■□□□□ 0.24
APP-208ENST00000439274 DRG2P55039 364 aaKnown RBP16.55■□□□□ 0.24
APP-208ENST00000439274 DRP2Q13474 957 aa16.55■□□□□ 0.24
APP-208ENST00000439274 PLCB4Q15147 1175 aa16.55■□□□□ 0.24
APP-208ENST00000439274 AOC3Q16853 763 aa16.55■□□□□ 0.24
APP-208ENST00000439274 NSMFQ6X4W1 530 aa16.55■□□□□ 0.24
APP-208ENST00000439274 DEFB132Q7Z7B7 95 aa16.55■□□□□ 0.24
APP-208ENST00000439274 EPS8L1Q8TE68 723 aa16.55■□□□□ 0.24
APP-208ENST00000439274 ATXN2LQ8WWM7 1075 aaKnown RBP16.55■□□□□ 0.24
APP-208ENST00000439274 POP1Q99575 1024 aaKnown RBP16.55■□□□□ 0.24
APP-208ENST00000439274 RANBP17Q9H2T7 1088 aaKnown RBP16.55■□□□□ 0.24
APP-208ENST00000439274 ARHGEF10LQ9HCE6 1279 aa16.55■□□□□ 0.24
APP-208ENST00000439274 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.55■□□□□ 0.24
APP-208ENST00000439274 HSPBP1Q9NZL4 362 aa16.55■□□□□ 0.24
APP-208ENST00000439274 TRPC6Q9Y210 931 aa16.55■□□□□ 0.24
APP-208ENST00000439274 CLRN2A0PK11 232 aa16.54■□□□□ 0.24
APP-208ENST00000439274 RTN2O75298 545 aa16.54■□□□□ 0.24
APP-208ENST00000439274 MMP13P45452 471 aa16.54■□□□□ 0.24
APP-208ENST00000439274 SCTRP47872 440 aa16.54■□□□□ 0.24
APP-208ENST00000439274 SEL1L2Q5TEA6 688 aa16.54■□□□□ 0.24
APP-208ENST00000439274 MIER3Q7Z3K6 550 aa16.54■□□□□ 0.24
APP-208ENST00000439274 PGM2Q96G03 612 aa16.54■□□□□ 0.24
APP-208ENST00000439274 KREMEN1Q96MU8 473 aa16.54■□□□□ 0.24
APP-208ENST00000439274 ZNF317Q96PQ6 595 aaPredicted RBP16.54■□□□□ 0.24
APP-208ENST00000439274 TMEM117Q9H0C3 514 aa16.54■□□□□ 0.24
APP-208ENST00000439274 ACTR5Q9H9F9 607 aaPredicted RBP16.54■□□□□ 0.24
APP-208ENST00000439274 PCYOX1Q9UHG3 505 aa16.54■□□□□ 0.24
APP-208ENST00000439274 NOCTQ9UK39 431 aaKnown RBP16.54■□□□□ 0.24
APP-208ENST00000439274 TMX2Q9Y320 296 aa16.54■□□□□ 0.24
APP-208ENST00000439274 CCDC169A6NNP5 214 aa16.54■□□□□ 0.24
APP-208ENST00000439274 ENTPD3O75355 529 aa16.54■□□□□ 0.24
APP-208ENST00000439274 MAP2K1Q02750 393 aaPredicted RBP16.54■□□□□ 0.24
APP-208ENST00000439274 CETN1Q12798 172 aa16.54■□□□□ 0.24
APP-208ENST00000439274 CCDC38Q502W7 563 aa16.54■□□□□ 0.24
APP-208ENST00000439274 CCDC25Q86WR0 208 aa16.54■□□□□ 0.24
APP-208ENST00000439274 CCDC105Q8IYK2 499 aa16.54■□□□□ 0.24
APP-208ENST00000439274 PPM1KQ8N3J5 372 aa16.54■□□□□ 0.24
APP-208ENST00000439274 IL31RAQ8NI17 732 aa16.54■□□□□ 0.24
APP-208ENST00000439274 JPH2Q9BR39 696 aaPredicted RBP16.54■□□□□ 0.24
APP-208ENST00000439274 NUP85Q9BW27 656 aa16.54■□□□□ 0.24
APP-208ENST00000439274 GPRC5CQ9NQ84 441 aa16.54■□□□□ 0.24
APP-208ENST00000439274 PFASO15067 1338 aa16.54■□□□□ 0.24
APP-208ENST00000439274 SPOPO43791 374 aa16.53■□□□□ 0.24
APP-208ENST00000439274 ADRB2P07550 413 aa16.53■□□□□ 0.24
APP-208ENST00000439274 RARAP10276 462 aa16.53■□□□□ 0.24
APP-208ENST00000439274 MUTP22033 750 aa16.53■□□□□ 0.24
APP-208ENST00000439274 CDR1P51861 262 aa16.53■□□□□ 0.24
APP-208ENST00000439274 SETQ01105 290 aaPredicted RBP16.53■□□□□ 0.24
APP-208ENST00000439274 LDHDQ86WU2 507 aa16.53■□□□□ 0.24
APP-208ENST00000439274 CCT6BQ92526 530 aa16.53■□□□□ 0.24
APP-208ENST00000439274 CD101Q93033 1021 aa16.53■□□□□ 0.24
APP-208ENST00000439274 MXRA8Q9BRK3 442 aa16.53■□□□□ 0.24
APP-208ENST00000439274 STK32BQ9NY57 414 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms