RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 NRG3P56975 720 aa4.83□□□□□ -1.64
HMGB1P31-201ENST00000437242 LRRC32Q14392 662 aa4.83□□□□□ -1.64
HMGB1P31-201ENST00000437242 LRCH2Q5VUJ6 765 aa4.83□□□□□ -1.64
HMGB1P31-201ENST00000437242 CCDC62Q6P9F0 684 aa4.83□□□□□ -1.64
HMGB1P31-201ENST00000437242 LMBR1LQ6UX01 489 aa4.83□□□□□ -1.64
HMGB1P31-201ENST00000437242 RD3Q7Z3Z2 195 aa4.83□□□□□ -1.64
HMGB1P31-201ENST00000437242 XYLT1Q86Y38 959 aa4.83□□□□□ -1.64
HMGB1P31-201ENST00000437242 CMTR2Q8IYT2 770 aaKnown RBP4.83□□□□□ -1.64
HMGB1P31-201ENST00000437242 EFHBQ8N7U6 833 aa4.83□□□□□ -1.64
HMGB1P31-201ENST00000437242 NTN5Q8WTR8 489 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P31-201ENST00000437242 CAVIN3Q969G5 261 aa4.83□□□□□ -1.64
HMGB1P31-201ENST00000437242 OSBPL2Q9H1P3 480 aa4.83□□□□□ -1.64
HMGB1P31-201ENST00000437242 WDR26Q9H7D7 661 aa4.83□□□□□ -1.64
HMGB1P31-201ENST00000437242 SPON1Q9HCB6 807 aa4.83□□□□□ -1.64
HMGB1P31-201ENST00000437242 IFT57Q9NWB7 429 aa4.83□□□□□ -1.64
HMGB1P31-201ENST00000437242 USP36Q9P275 1121 aaKnown RBP4.83□□□□□ -1.64
HMGB1P31-201ENST00000437242 CHST2Q9Y4C5 530 aa4.83□□□□□ -1.64
HMGB1P31-201ENST00000437242 DIRC3C9JPN6 131 aa4.82□□□□□ -1.64
HMGB1P31-201ENST00000437242 LEFTY2O00292 366 aa4.82□□□□□ -1.64
HMGB1P31-201ENST00000437242 ATXN1P54253 815 aaKnown RBP4.82□□□□□ -1.64
HMGB1P31-201ENST00000437242 RNASE9P60153 205 aaKnown RBP4.82□□□□□ -1.64
HMGB1P31-201ENST00000437242 MGAT5Q09328 741 aa4.82□□□□□ -1.64
HMGB1P31-201ENST00000437242 SQSTM1Q13501 440 aa4.82□□□□□ -1.64
HMGB1P31-201ENST00000437242 ERCC6LQ2NKX8 1250 aa4.82□□□□□ -1.64
HMGB1P31-201ENST00000437242 BEAN1Q3B7T3 259 aa4.82□□□□□ -1.64
HMGB1P31-201ENST00000437242 ZBTB41Q5SVQ8 909 aa4.82□□□□□ -1.64
HMGB1P31-201ENST00000437242 TAS1R1Q7RTX1 841 aa4.82□□□□□ -1.64
HMGB1P31-201ENST00000437242 MSL3Q8N5Y2 521 aaKnown RBP4.82□□□□□ -1.64
HMGB1P31-201ENST00000437242 OR10H5Q8NGA6 315 aa4.82□□□□□ -1.64
HMGB1P31-201ENST00000437242 GAB3Q8WWW8 586 aa4.82□□□□□ -1.64
HMGB1P31-201ENST00000437242 MAGEC2Q9UBF1 373 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P31-201ENST00000437242 MSRAQ9UJ68 235 aa4.82□□□□□ -1.64
HMGB1P31-201ENST00000437242 SPATA31A6Q5VVP1 1343 aa4.81□□□□□ -1.64
HMGB1P31-201ENST00000437242 PPP1R12AO14974 1030 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P31-201ENST00000437242 PFKMP08237 780 aa4.81□□□□□ -1.64
HMGB1P31-201ENST00000437242 SPATA31D3P0C874 917 aa4.81□□□□□ -1.64
HMGB1P31-201ENST00000437242 HKR1P10072 659 aa4.81□□□□□ -1.64
HMGB1P31-201ENST00000437242 ZNF37AP17032 561 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P31-201ENST00000437242 GPR15P49685 360 aa4.81□□□□□ -1.64
HMGB1P31-201ENST00000437242 CLK3P49761 638 aaKnown RBP4.81□□□□□ -1.64
HMGB1P31-201ENST00000437242 GUCY1B3Q02153 619 aa4.81□□□□□ -1.64
HMGB1P31-201ENST00000437242 NHLH2Q02577 135 aa4.81□□□□□ -1.64
HMGB1P31-201ENST00000437242 SF3A1Q15459 793 aaKnown RBP4.81□□□□□ -1.64
HMGB1P31-201ENST00000437242 NFE2L2Q16236 605 aa4.81□□□□□ -1.64
HMGB1P31-201ENST00000437242 CCDC178Q5BJE1 867 aa4.81□□□□□ -1.64
HMGB1P31-201ENST00000437242 SPATA31D4Q6ZUB0 917 aa4.81□□□□□ -1.64
HMGB1P31-201ENST00000437242 GLB1L2Q8IW92 636 aa4.81□□□□□ -1.64
HMGB1P31-201ENST00000437242 FDXACB1Q9BRP7 624 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P31-201ENST00000437242 ORAI3Q9BRQ5 295 aa4.81□□□□□ -1.64
HMGB1P31-201ENST00000437242 R3HDMLQ9H3Y0 253 aa4.81□□□□□ -1.64
HMGB1P31-201ENST00000437242 THG1LQ9NWX6 298 aaKnown RBP4.81□□□□□ -1.64
HMGB1P31-201ENST00000437242 KPNA6O60684 536 aa4.8□□□□□ -1.64
HMGB1P31-201ENST00000437242 RFPL3O75679 317 aa4.8□□□□□ -1.64
HMGB1P31-201ENST00000437242 F2P00734 622 aa4.8□□□□□ -1.64
HMGB1P31-201ENST00000437242 HLA-DOAP06340 250 aa4.8□□□□□ -1.64
HMGB1P31-201ENST00000437242 ZSCAN20P17040 1043 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P31-201ENST00000437242 TYRP1P17643 537 aa4.8□□□□□ -1.64
HMGB1P31-201ENST00000437242 BMPR1AP36894 532 aa4.8□□□□□ -1.64
HMGB1P31-201ENST00000437242 PPARAQ07869 468 aa4.8□□□□□ -1.64
HMGB1P31-201ENST00000437242 PABPC4Q13310 644 aaKnown RBP eCLIP4.8□□□□□ -1.64
HMGB1P31-201ENST00000437242 BMS1Q14692 1282 aaKnown RBP4.8□□□□□ -1.64
HMGB1P31-201ENST00000437242 DRICH1Q6PGQ1 229 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P31-201ENST00000437242 GPRIN1Q7Z2K8 1008 aa4.8□□□□□ -1.64
HMGB1P31-201ENST00000437242 KIF18BQ86Y91 864 aa4.8□□□□□ -1.64
HMGB1P31-201ENST00000437242 CPEB3Q8NE35 698 aaKnown RBP4.8□□□□□ -1.64
HMGB1P31-201ENST00000437242 CHTF18Q8WVB6 975 aa4.8□□□□□ -1.64
HMGB1P31-201ENST00000437242 NAF1Q96HR8 494 aaKnown RBP4.8□□□□□ -1.64
HMGB1P31-201ENST00000437242 COQ10AQ96MF6 247 aa4.8□□□□□ -1.64
HMGB1P31-201ENST00000437242 CDC5LQ99459 802 aaKnown RBP4.8□□□□□ -1.64
HMGB1P31-201ENST00000437242 SYBUQ9NX95 663 aa4.8□□□□□ -1.64
HMGB1P31-201ENST00000437242 CDK11AQ9UQ88 783 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P31-201ENST00000437242 INSL6Q9Y581 213 aa4.8□□□□□ -1.64
HMGB1P31-201ENST00000437242 COX11Q9Y6N1 276 aa4.8□□□□□ -1.64
HMGB1P31-201ENST00000437242 A0A1W2PR48 441 aa4.79□□□□□ -1.64
HMGB1P31-201ENST00000437242 UNC119BA6NIH7 251 aa4.79□□□□□ -1.64
HMGB1P31-201ENST00000437242 ZNF891A8MT65 544 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P31-201ENST00000437242 B5MCH6 92 aa4.79□□□□□ -1.64
HMGB1P31-201ENST00000437242 PRAMEF4O60810 478 aa4.79□□□□□ -1.64
HMGB1P31-201ENST00000437242 ASMTLO95671 621 aa4.79□□□□□ -1.64
HMGB1P31-201ENST00000437242 DDX6P26196 483 aaKnown RBP eCLIP4.79□□□□□ -1.64
HMGB1P31-201ENST00000437242 MGAT1P26572 445 aa4.79□□□□□ -1.64
HMGB1P31-201ENST00000437242 NEK4P51957 841 aa4.79□□□□□ -1.64
HMGB1P31-201ENST00000437242 SEC24CP53992 1094 aa4.79□□□□□ -1.64
HMGB1P31-201ENST00000437242 BLOC1S1P78537 153 aa4.79□□□□□ -1.64
HMGB1P31-201ENST00000437242 MXRA7P84157 204 aa4.79□□□□□ -1.64
HMGB1P31-201ENST00000437242 APBA1Q02410 837 aa4.79□□□□□ -1.64
HMGB1P31-201ENST00000437242 DSG1Q02413 1049 aa4.79□□□□□ -1.64
HMGB1P31-201ENST00000437242 DDB1Q16531 1140 aa4.79□□□□□ -1.64
HMGB1P31-201ENST00000437242 COLEC12Q5KU26 742 aa4.79□□□□□ -1.64
HMGB1P31-201ENST00000437242 NXPE1Q8N323 547 aa4.79□□□□□ -1.64
HMGB1P31-201ENST00000437242 SH3TC2Q8TF17 1288 aa4.79□□□□□ -1.64
HMGB1P31-201ENST00000437242 LINC00476Q8WZB0 136 aa4.79□□□□□ -1.64
HMGB1P31-201ENST00000437242 ZNF496Q96IT1 587 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P31-201ENST00000437242 TEX101Q9BY14 249 aa4.79□□□□□ -1.64
HMGB1P31-201ENST00000437242 RSAD1Q9HA92 442 aa4.79□□□□□ -1.64
HMGB1P31-201ENST00000437242 POGKQ9P215 609 aa4.79□□□□□ -1.64
HMGB1P31-201ENST00000437242 PIPSLA2A3N6 862 aa4.78□□□□□ -1.64
HMGB1P31-201ENST00000437242 LTA4HP09960 611 aaKnown RBP4.78□□□□□ -1.64
HMGB1P31-201ENST00000437242 RBP3P10745 1247 aa4.78□□□□□ -1.64
HMGB1P31-201ENST00000437242 CDK4P11802 303 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms