RNA–Protein interactions for RNA: ENST00000437036.6

SKA2-202, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 625 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-202ENST00000437036 ZNF507Q8TCN5 953 aa16.14■□□□□ 0.17
SKA2-202ENST00000437036 TARS2Q9BW92 718 aaKnown RBP16.14■□□□□ 0.17
SKA2-202ENST00000437036 TRAIPQ9BWF2 469 aa16.14■□□□□ 0.17
SKA2-202ENST00000437036 MAN1B1Q9UKM7 699 aa16.14■□□□□ 0.17
SKA2-202ENST00000437036 SCN5AQ14524 2016 aa16.13■□□□□ 0.17
SKA2-202ENST00000437036 MGEA5O60502 916 aa16.13■□□□□ 0.17
SKA2-202ENST00000437036 TOM1L1O75674 476 aa16.13■□□□□ 0.17
SKA2-202ENST00000437036 PIGRP01833 764 aa16.13■□□□□ 0.17
SKA2-202ENST00000437036 BMP8BP34820 402 aa16.13■□□□□ 0.17
SKA2-202ENST00000437036 SLFN12LQ6IEE8 588 aa16.13■□□□□ 0.17
SKA2-202ENST00000437036 EPM2AIP1Q7L775 607 aaPredicted RBP16.13■□□□□ 0.17
SKA2-202ENST00000437036 HS2ST1Q7LGA3 356 aa16.13■□□□□ 0.17
SKA2-202ENST00000437036 KIAA0895Q8NCT3 520 aa16.13■□□□□ 0.17
SKA2-202ENST00000437036 SCFD1Q8WVM8 642 aa16.13■□□□□ 0.17
SKA2-202ENST00000437036 RNPC3Q96LT9 517 aaKnown RBP16.13■□□□□ 0.17
SKA2-202ENST00000437036 FGFBP2Q9BYJ0 223 aa16.13■□□□□ 0.17
SKA2-202ENST00000437036 PDZD7Q9H5P4 517 aa16.13■□□□□ 0.17
SKA2-202ENST00000437036 SLC4A7Q9Y6M7 1214 aa16.13■□□□□ 0.17
SKA2-202ENST00000437036 SIP14410 1827 aa16.12■□□□□ 0.17
SKA2-202ENST00000437036 PDE4DIPQ5VU43 2346 aa16.12■□□□□ 0.17
SKA2-202ENST00000437036 A0A0U1RQF3 1178 aa16.12■□□□□ 0.17
SKA2-202ENST00000437036 BIN1O00499 593 aa16.12■□□□□ 0.17
SKA2-202ENST00000437036 CLDN3O15551 220 aa16.12■□□□□ 0.17
SKA2-202ENST00000437036 STAG3L1P0CL83 205 aa16.12■□□□□ 0.17
SKA2-202ENST00000437036 SNRPFP62306 86 aaKnown RBP16.12■□□□□ 0.17
SKA2-202ENST00000437036 KNOP1Q1ED39 458 aaKnown RBP16.12■□□□□ 0.17
SKA2-202ENST00000437036 BMT2Q1RMZ1 405 aa16.12■□□□□ 0.17
SKA2-202ENST00000437036 TCTN1Q2MV58 587 aa16.12■□□□□ 0.17
SKA2-202ENST00000437036 ZNF568Q3ZCX4 644 aa16.12■□□□□ 0.17
SKA2-202ENST00000437036 CAVIN1Q6NZI2 390 aaKnown RBP16.12■□□□□ 0.17
SKA2-202ENST00000437036 MPZL3Q6UWV2 235 aa16.12■□□□□ 0.17
SKA2-202ENST00000437036 RTN4RL1Q86UN2 441 aaPredicted RBP16.12■□□□□ 0.17
SKA2-202ENST00000437036 NELFCDQ8IXH7 590 aa16.12■□□□□ 0.17
SKA2-202ENST00000437036 GUF1Q8N442 669 aaKnown RBP16.12■□□□□ 0.17
SKA2-202ENST00000437036 GLIS3Q8NEA6 775 aa16.12■□□□□ 0.17
SKA2-202ENST00000437036 GOLGA5Q8TBA6 731 aa16.12■□□□□ 0.17
SKA2-202ENST00000437036 PGBD4Q96DM1 585 aa16.12■□□□□ 0.17
SKA2-202ENST00000437036 GBP3Q9H0R5 595 aa16.12■□□□□ 0.17
SKA2-202ENST00000437036 FAM105AQ9NUU6 356 aa16.12■□□□□ 0.17
SKA2-202ENST00000437036 CGNQ9P2M7 1197 aaKnown RBP16.12■□□□□ 0.17
SKA2-202ENST00000437036 ANKFY1Q9P2R3 1169 aa16.12■□□□□ 0.17
SKA2-202ENST00000437036 LRFN2Q9ULH4 789 aa16.12■□□□□ 0.17
SKA2-202ENST00000437036 USP20Q9Y2K6 914 aa16.12■□□□□ 0.17
SKA2-202ENST00000437036 GDAQ9Y2T3 454 aa16.12■□□□□ 0.17
SKA2-202ENST00000437036 PCDHB7Q9Y5E2 793 aa16.12■□□□□ 0.17
SKA2-202ENST00000437036 TTLL13PA6NNM8 815 aa16.11■□□□□ 0.17
SKA2-202ENST00000437036 C9IYK1 514 aa16.11■□□□□ 0.17
SKA2-202ENST00000437036 LETM1O95202 739 aaPredicted RBP16.11■□□□□ 0.17
SKA2-202ENST00000437036 NPTXRO95502 500 aa16.11■□□□□ 0.17
SKA2-202ENST00000437036 EOMESO95936 686 aa16.11■□□□□ 0.17
SKA2-202ENST00000437036 EDN1P05305 212 aa16.11■□□□□ 0.17
SKA2-202ENST00000437036 MCF2P10911 925 aa16.11■□□□□ 0.17
SKA2-202ENST00000437036 IBSPP21815 317 aaPredicted RBP16.11■□□□□ 0.17
SKA2-202ENST00000437036 WDR5P61964 334 aaKnown RBP16.11■□□□□ 0.17
SKA2-202ENST00000437036 FAM189BP81408 668 aa16.11■□□□□ 0.17
SKA2-202ENST00000437036 KCNA1Q09470 495 aa16.11■□□□□ 0.17
SKA2-202ENST00000437036 MORC3Q14149 939 aa16.11■□□□□ 0.17
SKA2-202ENST00000437036 HSP90AA2PQ14568 343 aaPredicted RBP16.11■□□□□ 0.17
SKA2-202ENST00000437036 SHHQ15465 462 aa16.11■□□□□ 0.17
SKA2-202ENST00000437036 KYAT1Q16773 422 aa16.11■□□□□ 0.17
SKA2-202ENST00000437036 ISM2Q6H9L7 571 aa16.11■□□□□ 0.17
SKA2-202ENST00000437036 TET1Q8NFU7 2136 aa16.11■□□□□ 0.17
SKA2-202ENST00000437036 LINC01599Q8WXQ3 324 aa16.11■□□□□ 0.17
SKA2-202ENST00000437036 ELAC1Q9H777 363 aaKnown RBP16.11■□□□□ 0.17
SKA2-202ENST00000437036 PCDHB2Q9Y5E7 798 aa16.11■□□□□ 0.17
SKA2-202ENST00000437036 CEP290O15078 2479 aa16.11■□□□□ 0.17
SKA2-202ENST00000437036 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.1■□□□□ 0.17
SKA2-202ENST00000437036 ZNF623O75123 536 aa16.1■□□□□ 0.17
SKA2-202ENST00000437036 PROZP22891 400 aa16.1■□□□□ 0.17
SKA2-202ENST00000437036 NOLC1Q14978 699 aaKnown RBP eCLIP16.1■□□□□ 0.17
SKA2-202ENST00000437036 COBLL1Q53SF7 1204 aa16.1■□□□□ 0.17
SKA2-202ENST00000437036 UBXN11Q5T124 520 aa16.1■□□□□ 0.17
SKA2-202ENST00000437036 EEF1DP3Q658K8 133 aa16.1■□□□□ 0.17
SKA2-202ENST00000437036 SASS6Q6UVJ0 657 aa16.1■□□□□ 0.17
SKA2-202ENST00000437036 CHRDL2Q6WN34 429 aa16.1■□□□□ 0.17
SKA2-202ENST00000437036 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.1■□□□□ 0.17
SKA2-202ENST00000437036 ZBTB33Q86T24 672 aa16.1■□□□□ 0.17
SKA2-202ENST00000437036 CDR2LQ86X02 465 aaPredicted RBP16.1■□□□□ 0.17
SKA2-202ENST00000437036 ECHDC2Q86YB7 292 aa16.1■□□□□ 0.17
SKA2-202ENST00000437036 NPAS4Q8IUM7 802 aa16.1■□□□□ 0.17
SKA2-202ENST00000437036 RNF169Q8NCN4 708 aa16.1■□□□□ 0.17
SKA2-202ENST00000437036 PHOSPHO2Q8TCD6 241 aa16.1■□□□□ 0.17
SKA2-202ENST00000437036 POMGNT1Q8WZA1 660 aa16.1■□□□□ 0.17
SKA2-202ENST00000437036 SLC9A7Q96T83 725 aa16.1■□□□□ 0.17
SKA2-202ENST00000437036 EIF2AQ9BY44 585 aaKnown RBP16.1■□□□□ 0.17
SKA2-202ENST00000437036 PTPRHQ9HD43 1115 aa16.1■□□□□ 0.17
SKA2-202ENST00000437036 UBN1Q9NPG3 1134 aa16.1■□□□□ 0.17
SKA2-202ENST00000437036 TMEM161AQ9NX61 479 aa16.1■□□□□ 0.17
SKA2-202ENST00000437036 TMEM63CQ9P1W3 806 aa16.1■□□□□ 0.17
SKA2-202ENST00000437036 MAPK8IP1Q9UQF2 711 aa16.1■□□□□ 0.17
SKA2-202ENST00000437036 ANKRD63C9JTQ0 380 aa16.09■□□□□ 0.17
SKA2-202ENST00000437036 PSMA7O14818 248 aa16.09■□□□□ 0.17
SKA2-202ENST00000437036 KIAA0391O15091 583 aaKnown RBP16.09■□□□□ 0.17
SKA2-202ENST00000437036 HOXA2O43364 376 aa16.09■□□□□ 0.17
SKA2-202ENST00000437036 CALUO43852 315 aaPredicted RBP16.09■□□□□ 0.17
SKA2-202ENST00000437036 HARSP12081 509 aaKnown RBP16.09■□□□□ 0.17
SKA2-202ENST00000437036 ITGA4P13612 1032 aa16.09■□□□□ 0.17
SKA2-202ENST00000437036 GARTP22102 1010 aa16.09■□□□□ 0.17
SKA2-202ENST00000437036 PRCPP42785 496 aa16.09■□□□□ 0.17
SKA2-202ENST00000437036 MCL1Q07820 350 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms