RNA–Protein interactions for RNA: ENST00000433454.3

NEFM-202, Transcript of neurofilament medium, humanhuman

TSL 2 BASIC

Gene NEFM, Length 2,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-202ENST00000433454 EDN1P05305 212 aa11.51□□□□□ -0.57
NEFM-202ENST00000433454 C6orf222P0C671 652 aaPredicted RBP11.51□□□□□ -0.57
NEFM-202ENST00000433454 PON1P27169 355 aa11.51□□□□□ -0.57
NEFM-202ENST00000433454 PSEN2P49810 448 aa11.51□□□□□ -0.57
NEFM-202ENST00000433454 IRX5P78411 483 aaPredicted RBP11.51□□□□□ -0.57
NEFM-202ENST00000433454 POU5F1BQ06416 359 aa11.51□□□□□ -0.57
NEFM-202ENST00000433454 ENPEPQ07075 957 aa11.51□□□□□ -0.57
NEFM-202ENST00000433454 CETN1Q12798 172 aa11.51□□□□□ -0.57
NEFM-202ENST00000433454 MEA1Q16626 185 aa11.51□□□□□ -0.57
NEFM-202ENST00000433454 CBWD6Q4V339 395 aa11.51□□□□□ -0.57
NEFM-202ENST00000433454 CBWD3Q5JTY5 395 aa11.51□□□□□ -0.57
NEFM-202ENST00000433454 CBWD5Q5RIA9 395 aa11.51□□□□□ -0.57
NEFM-202ENST00000433454 NFRKBQ6P4R8 1299 aa11.51□□□□□ -0.57
NEFM-202ENST00000433454 CD99L2Q8TCZ2 262 aa11.51□□□□□ -0.57
NEFM-202ENST00000433454 FAM213AQ9BRX8 229 aa11.51□□□□□ -0.57
NEFM-202ENST00000433454 MSTO1Q9BUK6 570 aa11.51□□□□□ -0.57
NEFM-202ENST00000433454 INO80BQ9C086 356 aaPredicted RBP11.51□□□□□ -0.57
NEFM-202ENST00000433454 NUCKS1Q9H1E3 243 aaKnown RBP11.51□□□□□ -0.57
NEFM-202ENST00000433454 SPC25Q9HBM1 224 aa11.51□□□□□ -0.57
NEFM-202ENST00000433454 SETD4Q9NVD3 440 aa11.51□□□□□ -0.57
NEFM-202ENST00000433454 USP20Q9Y2K6 914 aa11.51□□□□□ -0.57
NEFM-202ENST00000433454 ZNF233A6NK53 670 aa11.5□□□□□ -0.57
NEFM-202ENST00000433454 HAS3O00219 553 aa11.5□□□□□ -0.57
NEFM-202ENST00000433454 P4HA2O15460 535 aa11.5□□□□□ -0.57
NEFM-202ENST00000433454 CLDN3O15551 220 aa11.5□□□□□ -0.57
NEFM-202ENST00000433454 KPNA6O60684 536 aa11.5□□□□□ -0.57
NEFM-202ENST00000433454 TOM1L1O75674 476 aa11.5□□□□□ -0.57
NEFM-202ENST00000433454 LDHAP00338 332 aaKnown RBP11.5□□□□□ -0.57
NEFM-202ENST00000433454 RARBP10826 455 aa11.5□□□□□ -0.57
NEFM-202ENST00000433454 SLC9A1P19634 815 aa11.5□□□□□ -0.57
NEFM-202ENST00000433454 GJA9P57773 515 aa11.5□□□□□ -0.57
NEFM-202ENST00000433454 MCCD1P59942 119 aaPredicted RBP11.5□□□□□ -0.57
NEFM-202ENST00000433454 POLR2FP61218 127 aaKnown RBP11.5□□□□□ -0.57
NEFM-202ENST00000433454 DLG4P78352 724 aa11.5□□□□□ -0.57
NEFM-202ENST00000433454 MBTD1Q05BQ5 628 aa11.5□□□□□ -0.57
NEFM-202ENST00000433454 CYP24A1Q07973 514 aa11.5□□□□□ -0.57
NEFM-202ENST00000433454 CACNB2Q08289 660 aaPredicted RBP11.5□□□□□ -0.57
NEFM-202ENST00000433454 RRAGAQ7L523 313 aa11.5□□□□□ -0.57
NEFM-202ENST00000433454 TMC2Q8TDI7 906 aa11.5□□□□□ -0.57
NEFM-202ENST00000433454 BAP1Q92560 729 aa11.5□□□□□ -0.57
NEFM-202ENST00000433454 ZNF668Q96K58 619 aaPredicted RBP11.5□□□□□ -0.57
NEFM-202ENST00000433454 MFSD14AQ96MC6 490 aa11.5□□□□□ -0.57
NEFM-202ENST00000433454 GANQ9H2C0 597 aa11.5□□□□□ -0.57
NEFM-202ENST00000433454 PLAGL2Q9UPG8 496 aa11.5□□□□□ -0.57
NEFM-202ENST00000433454 A0A0B4J269 797 aa11.5□□□□□ -0.57
NEFM-202ENST00000433454 LRRC53A6NM62 1247 aa11.5□□□□□ -0.57
NEFM-202ENST00000433454 USP27XA6NNY8 438 aa11.5□□□□□ -0.57
NEFM-202ENST00000433454 GPR25O00155 361 aa11.5□□□□□ -0.57
NEFM-202ENST00000433454 ACKR2O00590 384 aa11.5□□□□□ -0.57
NEFM-202ENST00000433454 ZEB2O60315 1214 aa11.5□□□□□ -0.57
NEFM-202ENST00000433454 GNRH1P01148 92 aa11.5□□□□□ -0.57
NEFM-202ENST00000433454 VTNP04004 478 aa11.5□□□□□ -0.57
NEFM-202ENST00000433454 PRKAR2AP13861 404 aaKnown RBP11.5□□□□□ -0.57
NEFM-202ENST00000433454 ELNP15502 786 aa11.5□□□□□ -0.57
NEFM-202ENST00000433454 HNRNPH3P31942 346 aaKnown RBP11.5□□□□□ -0.57
NEFM-202ENST00000433454 PURAQ00577 322 aaKnown RBP11.5□□□□□ -0.57
NEFM-202ENST00000433454 TRIM32Q13049 653 aa11.5□□□□□ -0.57
NEFM-202ENST00000433454 PDXDC1Q6P996 788 aa11.5□□□□□ -0.57
NEFM-202ENST00000433454 TRIM65Q6PJ69 517 aa11.5□□□□□ -0.57
NEFM-202ENST00000433454 IFNLR1Q8IU57 520 aaPredicted RBP11.5□□□□□ -0.57
NEFM-202ENST00000433454 PLEKHO2Q8TD55 490 aa11.5□□□□□ -0.57
NEFM-202ENST00000433454 PARD3BQ8TEW8 1205 aa11.5□□□□□ -0.57
NEFM-202ENST00000433454 CCDC127Q96BQ5 260 aa11.5□□□□□ -0.57
NEFM-202ENST00000433454 SCLT1Q96NL6 688 aa11.5□□□□□ -0.57
NEFM-202ENST00000433454 ACO2Q99798 780 aaKnown RBP11.5□□□□□ -0.57
NEFM-202ENST00000433454 FZD8Q9H461 694 aa11.5□□□□□ -0.57
NEFM-202ENST00000433454 IFT122Q9HBG6 1241 aa11.5□□□□□ -0.57
NEFM-202ENST00000433454 NLRC4Q9NPP4 1024 aa11.5□□□□□ -0.57
NEFM-202ENST00000433454 TRMT1Q9NXH9 659 aaKnown RBP11.5□□□□□ -0.57
NEFM-202ENST00000433454 MBLAC1A4D2B0 266 aaPredicted RBP11.49□□□□□ -0.57
NEFM-202ENST00000433454 ZSCAN12O43309 604 aa11.49□□□□□ -0.57
NEFM-202ENST00000433454 HMGCRP04035 888 aa11.49□□□□□ -0.57
NEFM-202ENST00000433454 ACTN1P12814 892 aa11.49□□□□□ -0.57
NEFM-202ENST00000433454 UCHL3P15374 230 aa11.49□□□□□ -0.57
NEFM-202ENST00000433454 GCLMP48507 274 aa11.49□□□□□ -0.57
NEFM-202ENST00000433454 MXI1P50539 228 aa11.49□□□□□ -0.57
NEFM-202ENST00000433454 HTRA3P83110 453 aa11.49□□□□□ -0.57
NEFM-202ENST00000433454 APBA1Q02410 837 aa11.49□□□□□ -0.57
NEFM-202ENST00000433454 PRPF4BQ13523 1007 aaKnown RBP11.49□□□□□ -0.57
NEFM-202ENST00000433454 MTF1Q14872 753 aa11.49□□□□□ -0.57
NEFM-202ENST00000433454 TMEM132AQ24JP5 1023 aa11.49□□□□□ -0.57
NEFM-202ENST00000433454 GNASQ5JWF2 1037 aa11.49□□□□□ -0.57
NEFM-202ENST00000433454 C1orf220Q5T0J3 134 aa11.49□□□□□ -0.57
NEFM-202ENST00000433454 KLHDC7AQ5VTJ3 777 aa11.49□□□□□ -0.57
NEFM-202ENST00000433454 WDR59Q6PJI9 974 aa11.49□□□□□ -0.57
NEFM-202ENST00000433454 RAD9BQ6WBX8 426 aa11.49□□□□□ -0.57
NEFM-202ENST00000433454 TOGARAM2Q6ZUX3 1019 aa11.49□□□□□ -0.57
NEFM-202ENST00000433454 KIAA0319LQ8IZA0 1049 aa11.49□□□□□ -0.57
NEFM-202ENST00000433454 NLRP7Q8WX94 980 aa11.49□□□□□ -0.57
NEFM-202ENST00000433454 ZBTB45Q96K62 511 aaPredicted RBP11.49□□□□□ -0.57
NEFM-202ENST00000433454 UPF3AQ9H1J1 476 aaKnown RBP11.49□□□□□ -0.57
NEFM-202ENST00000433454 PRMT7Q9NVM4 692 aaPredicted RBP11.49□□□□□ -0.57
NEFM-202ENST00000433454 FBXL5Q9UKA1 691 aa11.49□□□□□ -0.57
NEFM-202ENST00000433454 A0A087WZ62 844 aa11.49□□□□□ -0.57
NEFM-202ENST00000433454 MYADML2A6NDP7 307 aa11.49□□□□□ -0.57
NEFM-202ENST00000433454 NLRP11P59045 1033 aaKnown RBP11.49□□□□□ -0.57
NEFM-202ENST00000433454 CDK17Q00537 523 aa11.49□□□□□ -0.57
NEFM-202ENST00000433454 PPP3CAQ08209 521 aa11.49□□□□□ -0.57
NEFM-202ENST00000433454 TSHZ1Q6ZSZ6 1077 aa11.49□□□□□ -0.57
NEFM-202ENST00000433454 ZNF410Q86VK4 478 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms