RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 EEF1GP26641 437 aaKnown RBP28.94■■■□□ 2.22
TMEM248-205ENST00000433271 CYP2J2P51589 502 aa28.94■■■□□ 2.22
TMEM248-205ENST00000433271 ATN1P54259 1190 aaPredicted RBP28.94■■■□□ 2.22
TMEM248-205ENST00000433271 KCNJ12Q14500 433 aa28.94■■■□□ 2.22
TMEM248-205ENST00000433271 FAM26DQ5JW98 314 aa28.94■■■□□ 2.22
TMEM248-205ENST00000433271 ANKRD33Q7Z3H0 272 aa28.94■■■□□ 2.22
TMEM248-205ENST00000433271 POMGNT1Q8WZA1 660 aa28.94■■■□□ 2.22
TMEM248-205ENST00000433271 HSPBP1Q9NZL4 362 aa28.94■■■□□ 2.22
TMEM248-205ENST00000433271 B4GALT5O43286 388 aa28.93■■■□□ 2.22
TMEM248-205ENST00000433271 CTSHP09668 335 aa28.93■■■□□ 2.22
TMEM248-205ENST00000433271 SFPQP23246 707 aaKnown RBP eCLIP28.93■■■□□ 2.22
TMEM248-205ENST00000433271 ATF7IP2Q5U623 682 aa28.93■■■□□ 2.22
TMEM248-205ENST00000433271 XXYLT1Q8NBI6 393 aa28.93■■■□□ 2.22
TMEM248-205ENST00000433271 CNOT6LQ96LI5 555 aaKnown RBP28.93■■■□□ 2.22
TMEM248-205ENST00000433271 PCIF1Q9H4Z3 704 aa28.93■■■□□ 2.22
TMEM248-205ENST00000433271 C11orf49Q9H6J7 331 aa28.93■■■□□ 2.22
TMEM248-205ENST00000433271 TNFSF13BQ9Y275 285 aa28.93■■■□□ 2.22
TMEM248-205ENST00000433271 KIAA0391O15091 583 aaKnown RBP28.92■■■□□ 2.22
TMEM248-205ENST00000433271 SLC16A3O15427 465 aaKnown RBP28.92■■■□□ 2.22
TMEM248-205ENST00000433271 TSPAN1O60635 241 aa28.92■■■□□ 2.22
TMEM248-205ENST00000433271 EXOC3O60645 756 aa28.92■■■□□ 2.22
TMEM248-205ENST00000433271 AKAP3O75969 853 aa28.92■■■□□ 2.22
TMEM248-205ENST00000433271 NCBP1Q09161 790 aaKnown RBP28.92■■■□□ 2.22
TMEM248-205ENST00000433271 CEP135Q66GS9 1140 aa28.92■■■□□ 2.22
TMEM248-205ENST00000433271 SARM1Q6SZW1 724 aa28.92■■■□□ 2.22
TMEM248-205ENST00000433271 ANKRD20A12PQ8NF67 263 aa28.92■■■□□ 2.22
TMEM248-205ENST00000433271 PAWRQ96IZ0 340 aaKnown RBP28.92■■■□□ 2.22
TMEM248-205ENST00000433271 TOX2Q96NM4 488 aa28.92■■■□□ 2.22
TMEM248-205ENST00000433271 MKNK1Q9BUB5 465 aa28.92■■■□□ 2.22
TMEM248-205ENST00000433271 PTPRHQ9HD43 1115 aa28.92■■■□□ 2.22
TMEM248-205ENST00000433271 FRMD4BQ9Y2L6 1034 aa28.92■■■□□ 2.22
TMEM248-205ENST00000433271 A0A0B4J269 797 aa28.91■■■□□ 2.22
TMEM248-205ENST00000433271 CLDN3O15551 220 aa28.91■■■□□ 2.22
TMEM248-205ENST00000433271 PQBP1O60828 265 aaKnown RBP28.91■■■□□ 2.22
TMEM248-205ENST00000433271 CKBP12277 381 aa28.91■■■□□ 2.22
TMEM248-205ENST00000433271 PROZP22891 400 aa28.91■■■□□ 2.22
TMEM248-205ENST00000433271 PLCB2Q00722 1185 aa28.91■■■□□ 2.22
TMEM248-205ENST00000433271 RBL2Q08999 1139 aa28.91■■■□□ 2.22
TMEM248-205ENST00000433271 TMEM132AQ24JP5 1023 aa28.91■■■□□ 2.22
TMEM248-205ENST00000433271 CATSPER4Q7RTX7 472 aa28.91■■■□□ 2.22
TMEM248-205ENST00000433271 CREBRFQ8IUR6 639 aa28.91■■■□□ 2.22
TMEM248-205ENST00000433271 CAGE1Q8TC20 777 aa28.91■■■□□ 2.22
TMEM248-205ENST00000433271 ZBTB45Q96K62 511 aaPredicted RBP28.91■■■□□ 2.22
TMEM248-205ENST00000433271 LIMA1Q9UHB6 759 aaKnown RBP28.91■■■□□ 2.22
TMEM248-205ENST00000433271 LRRC10BA6NIK2 292 aa28.91■■■□□ 2.22
TMEM248-205ENST00000433271 TLR3O15455 904 aaKnown RBP28.91■■■□□ 2.22
TMEM248-205ENST00000433271 ARF4P18085 180 aaPredicted RBP28.91■■■□□ 2.22
TMEM248-205ENST00000433271 FGFR4P22455 802 aa28.91■■■□□ 2.22
TMEM248-205ENST00000433271 PSMC2P35998 433 aaKnown RBP28.91■■■□□ 2.22
TMEM248-205ENST00000433271 CASP4P49662 377 aa28.91■■■□□ 2.22
TMEM248-205ENST00000433271 MARSP56192 900 aaKnown RBP28.91■■■□□ 2.22
TMEM248-205ENST00000433271 FANCCQ00597 558 aa28.91■■■□□ 2.22
TMEM248-205ENST00000433271 TCHPQ9BT92 498 aa28.91■■■□□ 2.22
TMEM248-205ENST00000433271 ANKFY1Q9P2R3 1169 aa28.91■■■□□ 2.22
TMEM248-205ENST00000433271 AP5Z1O43299 807 aa28.9■■■□□ 2.22
TMEM248-205ENST00000433271 SERPINC1P01008 464 aa28.9■■■□□ 2.22
TMEM248-205ENST00000433271 EPB41P11171 864 aaKnown RBP28.9■■■□□ 2.22
TMEM248-205ENST00000433271 ZNF618Q5T7W0 954 aa28.9■■■□□ 2.22
TMEM248-205ENST00000433271 MPZL3Q6UWV2 235 aa28.9■■■□□ 2.22
TMEM248-205ENST00000433271 NECAB2Q7Z6G3 386 aa28.9■■■□□ 2.22
TMEM248-205ENST00000433271 FRMD5Q7Z6J6 570 aa28.9■■■□□ 2.22
TMEM248-205ENST00000433271 CCDC155Q8N6L0 562 aa28.9■■■□□ 2.22
TMEM248-205ENST00000433271 HAPLN2Q9GZV7 340 aa28.9■■■□□ 2.22
TMEM248-205ENST00000433271 A0A1B0GUA9 196 aa28.89■■■□□ 2.22
TMEM248-205ENST00000433271 DCDC2CA8MYV0 355 aa28.89■■■□□ 2.22
TMEM248-205ENST00000433271 ABLIM1O14639 778 aa28.89■■■□□ 2.22
TMEM248-205ENST00000433271 MATR3P43243 847 aaKnown RBP eCLIP28.89■■■□□ 2.228e-7■■■■■ 32.6
TMEM248-205ENST00000433271 MCL1Q07820 350 aa28.89■■■□□ 2.22
TMEM248-205ENST00000433271 KRT31Q15323 416 aa28.89■■■□□ 2.22
TMEM248-205ENST00000433271 CCDC40Q4G0X9 1142 aa28.89■■■□□ 2.22
TMEM248-205ENST00000433271 FBXL18Q96ME1 805 aa28.89■■■□□ 2.22
TMEM248-205ENST00000433271 MSTO1Q9BUK6 570 aa28.89■■■□□ 2.22
TMEM248-205ENST00000433271 AGO2Q9UKV8 859 aaKnown RBP28.89■■■□□ 2.22
TMEM248-205ENST00000433271 NOC2LQ9Y3T9 749 aaKnown RBP28.89■■■□□ 2.22
TMEM248-205ENST00000433271 AXLP30530 894 aa28.88■■■□□ 2.21
TMEM248-205ENST00000433271 HSP90AA2PQ14568 343 aaPredicted RBP28.88■■■□□ 2.21
TMEM248-205ENST00000433271 APTXQ7Z2E3 356 aaKnown RBP28.88■■■□□ 2.21
TMEM248-205ENST00000433271 FAM186BQ8IYM0 893 aa28.88■■■□□ 2.21
TMEM248-205ENST00000433271 CPB2Q96IY4 423 aa28.88■■■□□ 2.21
TMEM248-205ENST00000433271 METTL14Q9HCE5 456 aaKnown RBP28.88■■■□□ 2.21
TMEM248-205ENST00000433271 KIAA1586Q9HCI6 787 aa28.88■■■□□ 2.21
TMEM248-205ENST00000433271 AGPAT5Q9NUQ2 364 aa28.88■■■□□ 2.21
TMEM248-205ENST00000433271 SQORQ9Y6N5 450 aa28.88■■■□□ 2.21
TMEM248-205ENST00000433271 MAPK13O15264 365 aa28.87■■■□□ 2.21
TMEM248-205ENST00000433271 HOXA11P31270 313 aaPredicted RBP28.87■■■□□ 2.21
TMEM248-205ENST00000433271 MTIF2P46199 727 aaKnown RBP28.87■■■□□ 2.21
TMEM248-205ENST00000433271 TLE2Q04725 743 aa28.87■■■□□ 2.21
TMEM248-205ENST00000433271 BFSP2Q13515 415 aa28.87■■■□□ 2.21
TMEM248-205ENST00000433271 TRIM60Q495X7 471 aa28.87■■■□□ 2.21
TMEM248-205ENST00000433271 FAM228AQ86W67 206 aa28.87■■■□□ 2.21
TMEM248-205ENST00000433271 GPD1LQ8N335 351 aa28.87■■■□□ 2.21
TMEM248-205ENST00000433271 SAAL1Q96ER3 474 aa28.87■■■□□ 2.21
TMEM248-205ENST00000433271 BORCS6Q96GS4 357 aa28.87■■■□□ 2.21
TMEM248-205ENST00000433271 PDZD7Q9H5P4 517 aa28.87■■■□□ 2.21
TMEM248-205ENST00000433271 ARMCX3Q9UH62 379 aaPredicted RBP28.87■■■□□ 2.21
TMEM248-205ENST00000433271 EXTL3O43909 919 aa28.87■■■□□ 2.21
TMEM248-205ENST00000433271 RPS6KA5O75582 802 aa28.87■■■□□ 2.21
TMEM248-205ENST00000433271 LDHAP00338 332 aaKnown RBP28.87■■■□□ 2.21
TMEM248-205ENST00000433271 NOLC1Q14978 699 aaKnown RBP eCLIP28.87■■■□□ 2.21
TMEM248-205ENST00000433271 ZNF568Q3ZCX4 644 aa28.87■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms