RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 MRPL43Q8N983 215 aaKnown RBP10.52□□□□□ -0.73
CDC42-IT1-201ENST00000431803 PRPF31Q8WWY3 499 aaKnown RBP10.52□□□□□ -0.73
CDC42-IT1-201ENST00000431803 PSPC1Q8WXF1 523 aaKnown RBP10.52□□□□□ -0.73
CDC42-IT1-201ENST00000431803 EDAQ92838 391 aa10.52□□□□□ -0.73
CDC42-IT1-201ENST00000431803 LPPQ93052 612 aa10.52□□□□□ -0.73
CDC42-IT1-201ENST00000431803 CEP170P1Q96L14 293 aa10.52□□□□□ -0.73
CDC42-IT1-201ENST00000431803 MINDY3Q9H8M7 445 aa10.52□□□□□ -0.73
CDC42-IT1-201ENST00000431803 FAM105AQ9NUU6 356 aa10.52□□□□□ -0.73
CDC42-IT1-201ENST00000431803 TBC1D13Q9NVG8 400 aa10.52□□□□□ -0.73
CDC42-IT1-201ENST00000431803 RGL1Q9NZL6 768 aa10.52□□□□□ -0.73
CDC42-IT1-201ENST00000431803 ARID2Q68CP9 1835 aa10.51□□□□□ -0.73
CDC42-IT1-201ENST00000431803 CARNS1A5YM72 827 aa10.51□□□□□ -0.73
CDC42-IT1-201ENST00000431803 GAS2O43903 313 aaKnown RBP10.51□□□□□ -0.73
CDC42-IT1-201ENST00000431803 ZC3H11AO75152 810 aaKnown RBP eCLIP10.51□□□□□ -0.73
CDC42-IT1-201ENST00000431803 OFD1O75665 1012 aa10.51□□□□□ -0.73
CDC42-IT1-201ENST00000431803 HOXB8P17481 243 aaPredicted RBP10.51□□□□□ -0.73
CDC42-IT1-201ENST00000431803 HOXA11P31270 313 aaPredicted RBP10.51□□□□□ -0.73
CDC42-IT1-201ENST00000431803 KRT2P35908 639 aa10.51□□□□□ -0.73
CDC42-IT1-201ENST00000431803 TECP42680 631 aa10.51□□□□□ -0.73
CDC42-IT1-201ENST00000431803 LAMTOR4Q0VGL1 99 aa10.51□□□□□ -0.73
CDC42-IT1-201ENST00000431803 EMC2Q15006 297 aa10.51□□□□□ -0.73
CDC42-IT1-201ENST00000431803 NOMO2Q5JPE7 1267 aa10.51□□□□□ -0.73
CDC42-IT1-201ENST00000431803 NCAPH2Q6IBW4 605 aa10.51□□□□□ -0.73
CDC42-IT1-201ENST00000431803 SRGAP1Q7Z6B7 1085 aa10.51□□□□□ -0.73
CDC42-IT1-201ENST00000431803 NECAB1Q8N987 351 aa10.51□□□□□ -0.73
CDC42-IT1-201ENST00000431803 NSUN7Q8NE18 718 aaKnown RBP10.51□□□□□ -0.73
CDC42-IT1-201ENST00000431803 BCL7CQ8WUZ0 217 aaPredicted RBP10.51□□□□□ -0.73
CDC42-IT1-201ENST00000431803 TMEM143Q96AN5 459 aa10.51□□□□□ -0.73
CDC42-IT1-201ENST00000431803 ZBP1Q9H171 429 aa10.51□□□□□ -0.73
CDC42-IT1-201ENST00000431803 ZSWIM4Q9H7M6 989 aa10.51□□□□□ -0.73
CDC42-IT1-201ENST00000431803 PPP4R2Q9NY27 417 aa10.51□□□□□ -0.73
CDC42-IT1-201ENST00000431803 PCDHB2Q9Y5E7 798 aa10.51□□□□□ -0.73
CDC42-IT1-201ENST00000431803 HCFC2Q9Y5Z7 792 aa10.51□□□□□ -0.73
CDC42-IT1-201ENST00000431803 IRAK3Q9Y616 596 aa10.51□□□□□ -0.73
CDC42-IT1-201ENST00000431803 NT5C1B-RDH14C9J2C7 533 aa10.5□□□□□ -0.73
CDC42-IT1-201ENST00000431803 ZBTB39O15060 712 aa10.5□□□□□ -0.73
CDC42-IT1-201ENST00000431803 B4GALT3O60512 393 aa10.5□□□□□ -0.73
CDC42-IT1-201ENST00000431803 CLASP2O75122 1294 aaKnown RBP10.5□□□□□ -0.73
CDC42-IT1-201ENST00000431803 SLITRK3O94933 977 aa10.5□□□□□ -0.73
CDC42-IT1-201ENST00000431803 LYPLA2O95372 231 aa10.5□□□□□ -0.73
CDC42-IT1-201ENST00000431803 GALTP07902 379 aa10.5□□□□□ -0.73
CDC42-IT1-201ENST00000431803 CYP4A11Q02928 519 aa10.5□□□□□ -0.73
CDC42-IT1-201ENST00000431803 CTTNQ14247 550 aaKnown RBP10.5□□□□□ -0.73
CDC42-IT1-201ENST00000431803 LONRF3Q496Y0 759 aa10.5□□□□□ -0.73
CDC42-IT1-201ENST00000431803 UBXN11Q5T124 520 aa10.5□□□□□ -0.73
CDC42-IT1-201ENST00000431803 LLGL2Q6P1M3 1020 aa10.5□□□□□ -0.73
CDC42-IT1-201ENST00000431803 AGMOQ6ZNB7 445 aa10.5□□□□□ -0.73
CDC42-IT1-201ENST00000431803 OTUD6AQ7L8S5 288 aa10.5□□□□□ -0.73
CDC42-IT1-201ENST00000431803 MRPL10Q7Z7H8 261 aaKnown RBP10.5□□□□□ -0.73
CDC42-IT1-201ENST00000431803 DDX53Q86TM3 631 aaKnown RBP10.5□□□□□ -0.73
CDC42-IT1-201ENST00000431803 FERMT3Q86UX7 667 aa10.5□□□□□ -0.73
CDC42-IT1-201ENST00000431803 TCP11Q8WWU5 503 aa10.5□□□□□ -0.73
CDC42-IT1-201ENST00000431803 CASP10Q92851 521 aa10.5□□□□□ -0.73
CDC42-IT1-201ENST00000431803 PGBD4Q96DM1 585 aa10.5□□□□□ -0.73
CDC42-IT1-201ENST00000431803 TMEM169Q96HH4 297 aa10.5□□□□□ -0.73
CDC42-IT1-201ENST00000431803 IGSF21Q96ID5 467 aa10.5□□□□□ -0.73
CDC42-IT1-201ENST00000431803 DYDC2Q96IM9 177 aa10.5□□□□□ -0.73
CDC42-IT1-201ENST00000431803 HSD17B14Q9BPX1 270 aa10.5□□□□□ -0.73
CDC42-IT1-201ENST00000431803 VN1R3Q9BXE9 311 aa10.5□□□□□ -0.73
CDC42-IT1-201ENST00000431803 KCNH6Q9H252 994 aa10.5□□□□□ -0.73
CDC42-IT1-201ENST00000431803 NRDE2Q9H7Z3 1164 aa10.5□□□□□ -0.73
CDC42-IT1-201ENST00000431803 BRMS1Q9HCU9 246 aa10.5□□□□□ -0.73
CDC42-IT1-201ENST00000431803 XPNPEP1Q9NQW7 623 aa10.5□□□□□ -0.73
CDC42-IT1-201ENST00000431803 ZDBF2Q9HCK1 2354 aa10.5□□□□□ -0.73
CDC42-IT1-201ENST00000431803 BTBD18B2RXH4 712 aa10.49□□□□□ -0.73
CDC42-IT1-201ENST00000431803 WNT7AO00755 349 aa10.49□□□□□ -0.73
CDC42-IT1-201ENST00000431803 ASAP2O43150 1006 aa10.49□□□□□ -0.73
CDC42-IT1-201ENST00000431803 MARCH6O60337 910 aa10.49□□□□□ -0.73
CDC42-IT1-201ENST00000431803 JAK2O60674 1132 aa10.49□□□□□ -0.73
CDC42-IT1-201ENST00000431803 BAG4O95429 457 aaKnown RBP10.49□□□□□ -0.73
CDC42-IT1-201ENST00000431803 SRGAP2CP0DJJ0 459 aa10.49□□□□□ -0.73
CDC42-IT1-201ENST00000431803 CTSAP10619 480 aa10.49□□□□□ -0.73
CDC42-IT1-201ENST00000431803 AFF1P51825 1210 aaKnown RBP10.49□□□□□ -0.73
CDC42-IT1-201ENST00000431803 ZXDAP98168 799 aa10.49□□□□□ -0.73
CDC42-IT1-201ENST00000431803 ST3GAL1Q11201 340 aa10.49□□□□□ -0.73
CDC42-IT1-201ENST00000431803 PCBP1Q15365 356 aaKnown RBP eCLIP10.49□□□□□ -0.73
CDC42-IT1-201ENST00000431803 CALCRLQ16602 461 aa10.49□□□□□ -0.73
CDC42-IT1-201ENST00000431803 TPRNQ4KMQ1 711 aa10.49□□□□□ -0.73
CDC42-IT1-201ENST00000431803 XKR9Q5GH70 373 aa10.49□□□□□ -0.73
CDC42-IT1-201ENST00000431803 ERICH6BQ5W0A0 696 aa10.49□□□□□ -0.73
CDC42-IT1-201ENST00000431803 TRIM67Q6ZTA4 783 aa10.49□□□□□ -0.73
CDC42-IT1-201ENST00000431803 BMP8AQ7Z5Y6 402 aa10.49□□□□□ -0.73
CDC42-IT1-201ENST00000431803 VPS52Q8N1B4 723 aa10.49□□□□□ -0.73
CDC42-IT1-201ENST00000431803 KRI1Q8N9T8 703 aaKnown RBP10.49□□□□□ -0.73
CDC42-IT1-201ENST00000431803 RNF149Q8NC42 400 aa10.49□□□□□ -0.73
CDC42-IT1-201ENST00000431803 RPGRIP1Q96KN7 1286 aa10.49□□□□□ -0.73
CDC42-IT1-201ENST00000431803 MTMR9Q96QG7 549 aa10.49□□□□□ -0.73
CDC42-IT1-201ENST00000431803 EIF2AK1Q9BQI3 630 aaKnown RBP10.49□□□□□ -0.73
CDC42-IT1-201ENST00000431803 DNAJB4Q9UDY4 337 aa10.49□□□□□ -0.73
CDC42-IT1-201ENST00000431803 PCDHA12Q9UN75 941 aa10.49□□□□□ -0.73
CDC42-IT1-201ENST00000431803 INPP5FQ9Y2H2 1132 aa10.49□□□□□ -0.73
CDC42-IT1-201ENST00000431803 USP34Q70CQ2 3546 aa10.49□□□□□ -0.73
CDC42-IT1-201ENST00000431803 CNTNAP2Q9UHC6 1331 aa10.49□□□□□ -0.73
CDC42-IT1-201ENST00000431803 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.48□□□□□ -0.73
CDC42-IT1-201ENST00000431803 TMEM221A6NGB7 291 aa10.48□□□□□ -0.73
CDC42-IT1-201ENST00000431803 M0R296 226 aa10.48□□□□□ -0.73
CDC42-IT1-201ENST00000431803 INPPL1O15357 1258 aa10.48□□□□□ -0.73
CDC42-IT1-201ENST00000431803 NEMFO60524 1076 aa10.48□□□□□ -0.73
CDC42-IT1-201ENST00000431803 TSPAN1O60635 241 aa10.48□□□□□ -0.73
CDC42-IT1-201ENST00000431803 CXCL14O95715 111 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms