RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 PDE12Q6L8Q7 609 aaKnown RBP13.1□□□□□ -0.31
HDAC4-202ENST00000430200 OTUD6AQ7L8S5 288 aa13.1□□□□□ -0.31
HDAC4-202ENST00000430200 TAS1R1Q7RTX1 841 aa13.1□□□□□ -0.31
HDAC4-202ENST00000430200 SLC22A17Q8WUG5 538 aa13.1□□□□□ -0.31
HDAC4-202ENST00000430200 RPGRIP1Q96KN7 1286 aa13.1□□□□□ -0.31
HDAC4-202ENST00000430200 GAD1Q99259 594 aa13.1□□□□□ -0.31
HDAC4-202ENST00000430200 POP1Q99575 1024 aaKnown RBP13.1□□□□□ -0.31
HDAC4-202ENST00000430200 KIFC3Q9BVG8 833 aa13.1□□□□□ -0.31
HDAC4-202ENST00000430200 APOL6Q9BWW8 343 aa13.1□□□□□ -0.31
HDAC4-202ENST00000430200 PHF7Q9BWX1 381 aaPredicted RBP13.1□□□□□ -0.31
HDAC4-202ENST00000430200 PRG3Q9Y2Y8 225 aaPredicted RBP13.1□□□□□ -0.31
HDAC4-202ENST00000430200 TSC2P49815 1807 aa13.1□□□□□ -0.31
HDAC4-202ENST00000430200 ARL5CA6NH57 179 aa13.09□□□□□ -0.31
HDAC4-202ENST00000430200 NRP1O14786 923 aa13.09□□□□□ -0.31
HDAC4-202ENST00000430200 ERLIN2O94905 339 aa13.09□□□□□ -0.31
HDAC4-202ENST00000430200 SSBP05455 408 aaKnown RBP eCLIP13.09□□□□□ -0.31
HDAC4-202ENST00000430200 CA8P35219 290 aa13.09□□□□□ -0.31
HDAC4-202ENST00000430200 ALDH7A1P49419 539 aaKnown RBP13.09□□□□□ -0.31
HDAC4-202ENST00000430200 RBM25P49756 843 aaKnown RBP13.09□□□□□ -0.31
HDAC4-202ENST00000430200 KRT17Q04695 432 aa13.09□□□□□ -0.31
HDAC4-202ENST00000430200 RNASELQ05823 741 aaKnown RBP13.09□□□□□ -0.31
HDAC4-202ENST00000430200 DDX53Q86TM3 631 aaKnown RBP13.09□□□□□ -0.31
HDAC4-202ENST00000430200 NOSTRINQ8IVI9 506 aa13.09□□□□□ -0.31
HDAC4-202ENST00000430200 COLGALT2Q8IYK4 626 aa13.09□□□□□ -0.31
HDAC4-202ENST00000430200 RNF168Q8IYW5 571 aaPredicted RBP13.09□□□□□ -0.31
HDAC4-202ENST00000430200 RABGGTAQ92696 567 aa13.09□□□□□ -0.31
HDAC4-202ENST00000430200 B3GALT6Q96L58 329 aa13.09□□□□□ -0.31
HDAC4-202ENST00000430200 LLPHQ9BRT6 129 aaKnown RBP13.09□□□□□ -0.31
HDAC4-202ENST00000430200 CCDC113Q9H0I3 377 aa13.09□□□□□ -0.31
HDAC4-202ENST00000430200 CSRNP2Q9H175 543 aa13.09□□□□□ -0.31
HDAC4-202ENST00000430200 FOXP1Q9H334 677 aaPredicted RBP13.09□□□□□ -0.31
HDAC4-202ENST00000430200 PUF60Q9UHX1 559 aaKnown RBP13.09□□□□□ -0.31
HDAC4-202ENST00000430200 PCDHB6Q9Y5E3 794 aa13.09□□□□□ -0.31
HDAC4-202ENST00000430200 CNTNAP2Q9UHC6 1331 aa13.09□□□□□ -0.31
HDAC4-202ENST00000430200 PIEZO1Q92508 2521 aa13.08□□□□□ -0.32
HDAC4-202ENST00000430200 WDR87Q6ZQQ6 2873 aa13.08□□□□□ -0.32
HDAC4-202ENST00000430200 LRRIQ4A6NIV6 560 aa13.08□□□□□ -0.32
HDAC4-202ENST00000430200 LILRB3O75022 631 aa13.08□□□□□ -0.32
HDAC4-202ENST00000430200 NPTXRO95502 500 aa13.08□□□□□ -0.32
HDAC4-202ENST00000430200 CXCL14O95715 111 aa13.08□□□□□ -0.32
HDAC4-202ENST00000430200 SKIP12755 728 aa13.08□□□□□ -0.32
HDAC4-202ENST00000430200 ALADP13716 330 aa13.08□□□□□ -0.32
HDAC4-202ENST00000430200 AKAP5P24588 427 aa13.08□□□□□ -0.32
HDAC4-202ENST00000430200 MXD4Q14582 209 aaPredicted RBP13.08□□□□□ -0.32
HDAC4-202ENST00000430200 RARS2Q5T160 578 aaKnown RBP13.08□□□□□ -0.32
HDAC4-202ENST00000430200 NOTUMQ6P988 496 aa13.08□□□□□ -0.32
HDAC4-202ENST00000430200 PAAF1Q9BRP4 392 aa13.08□□□□□ -0.32
HDAC4-202ENST00000430200 POLR3CQ9BUI4 534 aaPredicted RBP13.08□□□□□ -0.32
HDAC4-202ENST00000430200 NFKBIZQ9BYH8 718 aa13.08□□□□□ -0.32
HDAC4-202ENST00000430200 PDZD7Q9H5P4 517 aa13.08□□□□□ -0.32
HDAC4-202ENST00000430200 TUFT1Q9NNX1 390 aa13.08□□□□□ -0.32
HDAC4-202ENST00000430200 KLK14Q9P0G3 267 aa13.08□□□□□ -0.32
HDAC4-202ENST00000430200 DBR1Q9UK59 544 aaKnown RBP13.08□□□□□ -0.32
HDAC4-202ENST00000430200 IRAK3Q9Y616 596 aa13.08□□□□□ -0.32
HDAC4-202ENST00000430200 C2CD4DB7Z1M9 353 aa13.07□□□□□ -0.32
HDAC4-202ENST00000430200 ASAP2O43150 1006 aa13.07□□□□□ -0.32
HDAC4-202ENST00000430200 CNPP09543 421 aaKnown RBP13.07□□□□□ -0.32
HDAC4-202ENST00000430200 ITGA4P13612 1032 aa13.07□□□□□ -0.32
HDAC4-202ENST00000430200 IGFBP6P24592 240 aaPredicted RBP13.07□□□□□ -0.32
HDAC4-202ENST00000430200 U2AF2P26368 475 aaKnown RBP eCLIP13.07□□□□□ -0.32
HDAC4-202ENST00000430200 RPA1P27694 616 aa13.07□□□□□ -0.32
HDAC4-202ENST00000430200 POU5F1BQ06416 359 aa13.07□□□□□ -0.32
HDAC4-202ENST00000430200 EEF1DP3Q658K8 133 aa13.07□□□□□ -0.32
HDAC4-202ENST00000430200 PPP4R3CPQ6ZMV5 832 aa13.07□□□□□ -0.32
HDAC4-202ENST00000430200 KCNK18Q7Z418 384 aa13.07□□□□□ -0.32
HDAC4-202ENST00000430200 EXOC8Q8IYI6 725 aa13.07□□□□□ -0.32
HDAC4-202ENST00000430200 URGCPQ8TCY9 931 aa13.07□□□□□ -0.32
HDAC4-202ENST00000430200 CASP10Q92851 521 aa13.07□□□□□ -0.32
HDAC4-202ENST00000430200 PGBD4Q96DM1 585 aa13.07□□□□□ -0.32
HDAC4-202ENST00000430200 HERC2P3Q9BVR0 1158 aa13.07□□□□□ -0.32
HDAC4-202ENST00000430200 HCN4Q9Y3Q4 1203 aa13.07□□□□□ -0.32
HDAC4-202ENST00000430200 CFAP54Q96N23 3096 aa13.07□□□□□ -0.32
HDAC4-202ENST00000430200 A0A1B0GUA9 196 aa13.06□□□□□ -0.32
HDAC4-202ENST00000430200 C2CD2LO14523 706 aa13.06□□□□□ -0.32
HDAC4-202ENST00000430200 PTGESO14684 152 aa13.06□□□□□ -0.32
HDAC4-202ENST00000430200 PDGFBP01127 241 aaPredicted RBP13.06□□□□□ -0.32
HDAC4-202ENST00000430200 MYBP10242 640 aa13.06□□□□□ -0.32
HDAC4-202ENST00000430200 CDC25AP30304 524 aa13.06□□□□□ -0.32
HDAC4-202ENST00000430200 FXR2P51116 673 aaKnown RBP eCLIP13.06□□□□□ -0.32
HDAC4-202ENST00000430200 CLCN4P51793 760 aa13.06□□□□□ -0.32
HDAC4-202ENST00000430200 HMGN5P82970 282 aaKnown RBP13.06□□□□□ -0.32
HDAC4-202ENST00000430200 TFDP1Q14186 410 aa13.06□□□□□ -0.32
HDAC4-202ENST00000430200 SAFBQ15424 915 aaKnown RBP eCLIP13.06□□□□□ -0.32
HDAC4-202ENST00000430200 NAB2Q15742 525 aa13.06□□□□□ -0.32
HDAC4-202ENST00000430200 SLC27A1Q6PCB7 646 aa13.06□□□□□ -0.32
HDAC4-202ENST00000430200 PADI6Q6TGC4 694 aa13.06□□□□□ -0.32
HDAC4-202ENST00000430200 DAW1Q8N136 415 aa13.06□□□□□ -0.32
HDAC4-202ENST00000430200 IGSF22Q8N9C0 903 aa13.06□□□□□ -0.32
HDAC4-202ENST00000430200 EDAQ92838 391 aa13.06□□□□□ -0.32
HDAC4-202ENST00000430200 CCDC51Q96ER9 411 aa13.06□□□□□ -0.32
HDAC4-202ENST00000430200 ASIC4Q96FT7 647 aa13.06□□□□□ -0.32
HDAC4-202ENST00000430200 CCDC43Q96MW1 224 aaKnown RBP13.06□□□□□ -0.32
HDAC4-202ENST00000430200 KLHL5Q96PQ7 755 aa13.06□□□□□ -0.32
HDAC4-202ENST00000430200 TMEM175Q9BSA9 504 aa13.06□□□□□ -0.32
HDAC4-202ENST00000430200 MMTAG2Q9BU76 263 aaKnown RBP13.06□□□□□ -0.32
HDAC4-202ENST00000430200 ADAM7Q9H2U9 754 aa13.06□□□□□ -0.32
HDAC4-202ENST00000430200 FZD8Q9H461 694 aa13.06□□□□□ -0.32
HDAC4-202ENST00000430200 SH2B1Q9NRF2 756 aaPredicted RBP13.06□□□□□ -0.32
HDAC4-202ENST00000430200 FSD2A1L4K1 749 aa13.05□□□□□ -0.32
HDAC4-202ENST00000430200 HOXB8P17481 243 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms