RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 CCDC34Q96HJ3 373 aa24.52■■□□□ 1.52
PTPN18-205ENST00000428843 TIGD1Q96MW7 591 aa24.52■■□□□ 1.52
PTPN18-205ENST00000428843 TARS2Q9BW92 718 aaKnown RBP24.52■■□□□ 1.52
PTPN18-205ENST00000428843 FGFBP2Q9BYJ0 223 aa24.52■■□□□ 1.52
PTPN18-205ENST00000428843 PBX4Q9BYU1 374 aa24.52■■□□□ 1.52
PTPN18-205ENST00000428843 RNF216Q9NWF9 866 aaPredicted RBP24.52■■□□□ 1.52
PTPN18-205ENST00000428843 PCDHB2Q9Y5E7 798 aa24.52■■□□□ 1.52
PTPN18-205ENST00000428843 PCDHA11Q9Y5I1 949 aa24.52■■□□□ 1.52
PTPN18-205ENST00000428843 ZNF623O75123 536 aa24.51■■□□□ 1.51
PTPN18-205ENST00000428843 PPP1R37O75864 691 aa24.51■■□□□ 1.51
PTPN18-205ENST00000428843 GCNT3O95395 438 aa24.51■■□□□ 1.51
PTPN18-205ENST00000428843 NPTXRO95502 500 aa24.51■■□□□ 1.51
PTPN18-205ENST00000428843 MYBP10242 640 aa24.51■■□□□ 1.51
PTPN18-205ENST00000428843 MYOGP15173 224 aa24.51■■□□□ 1.51
PTPN18-205ENST00000428843 ABCD1P33897 745 aa24.51■■□□□ 1.51
PTPN18-205ENST00000428843 CASP5P51878 434 aa24.51■■□□□ 1.51
PTPN18-205ENST00000428843 HTRA4P83105 476 aaPredicted RBP24.51■■□□□ 1.51
PTPN18-205ENST00000428843 EHHADHQ08426 723 aa24.51■■□□□ 1.51
PTPN18-205ENST00000428843 DPYDQ12882 1025 aa24.51■■□□□ 1.51
PTPN18-205ENST00000428843 RNF169Q8NCN4 708 aa24.51■■□□□ 1.51
PTPN18-205ENST00000428843 RAD9AQ99638 391 aa24.51■■□□□ 1.51
PTPN18-205ENST00000428843 STRA6Q9BX79 667 aa24.51■■□□□ 1.51
PTPN18-205ENST00000428843 LMBRD1Q9NUN5 540 aa24.51■■□□□ 1.51
PTPN18-205ENST00000428843 TNFSF13BQ9Y275 285 aa24.51■■□□□ 1.51
PTPN18-205ENST00000428843 KINO60870 393 aaKnown RBP24.5■■□□□ 1.51
PTPN18-205ENST00000428843 DGKIO75912 1065 aa24.5■■□□□ 1.51
PTPN18-205ENST00000428843 EOMESO95936 686 aa24.5■■□□□ 1.51
PTPN18-205ENST00000428843 POSTNQ15063 836 aa24.5■■□□□ 1.51
PTPN18-205ENST00000428843 RAB30Q15771 203 aa24.5■■□□□ 1.51
PTPN18-205ENST00000428843 KMT5BQ4FZB7 885 aa24.5■■□□□ 1.51
PTPN18-205ENST00000428843 FAM26FQ5R3K3 315 aa24.5■■□□□ 1.51
PTPN18-205ENST00000428843 HVCN1Q96D96 273 aa24.5■■□□□ 1.51
PTPN18-205ENST00000428843 YME1L1Q96TA2 773 aa24.5■■□□□ 1.51
PTPN18-205ENST00000428843 TRIM6Q9C030 488 aaPredicted RBP24.5■■□□□ 1.51
PTPN18-205ENST00000428843 MSRAQ9UJ68 235 aa24.5■■□□□ 1.51
PTPN18-205ENST00000428843 YBX2Q9Y2T7 364 aaKnown RBP24.5■■□□□ 1.51
PTPN18-205ENST00000428843 INSL6Q9Y581 213 aa24.5■■□□□ 1.51
PTPN18-205ENST00000428843 COL4A6Q14031 1691 aa24.5■■□□□ 1.51
PTPN18-205ENST00000428843 FNDC1Q4ZHG4 1894 aaPredicted RBP24.49■■□□□ 1.51
PTPN18-205ENST00000428843 RPN1P04843 607 aaKnown RBP24.49■■□□□ 1.51
PTPN18-205ENST00000428843 FGFR1P11362 822 aa24.49■■□□□ 1.51
PTPN18-205ENST00000428843 GATMP50440 423 aa24.49■■□□□ 1.51
PTPN18-205ENST00000428843 PNOCQ13519 176 aa24.49■■□□□ 1.51
PTPN18-205ENST00000428843 MRPL10Q7Z7H8 261 aaKnown RBP24.49■■□□□ 1.51
PTPN18-205ENST00000428843 MAP4K3Q8IVH8 894 aa24.49■■□□□ 1.51
PTPN18-205ENST00000428843 SMG8Q8ND04 991 aaKnown RBP24.49■■□□□ 1.51
PTPN18-205ENST00000428843 GLIS3Q8NEA6 775 aa24.49■■□□□ 1.51
PTPN18-205ENST00000428843 LPPQ93052 612 aa24.49■■□□□ 1.51
PTPN18-205ENST00000428843 ZNF689Q96CS4 500 aaPredicted RBP24.49■■□□□ 1.51
PTPN18-205ENST00000428843 BICD1Q96G01 975 aa24.49■■□□□ 1.51
PTPN18-205ENST00000428843 ADPGKQ9BRR6 497 aa24.49■■□□□ 1.51
PTPN18-205ENST00000428843 PTPRHQ9HD43 1115 aa24.49■■□□□ 1.51
PTPN18-205ENST00000428843 RNF19AQ9NV58 838 aa24.49■■□□□ 1.51
PTPN18-205ENST00000428843 EXOC1Q9NV70 894 aa24.49■■□□□ 1.51
PTPN18-205ENST00000428843 IPPQ9Y573 584 aa24.49■■□□□ 1.51
PTPN18-205ENST00000428843 PCDHB13Q9Y5F0 798 aa24.49■■□□□ 1.51
PTPN18-205ENST00000428843 PIGRP01833 764 aa24.48■■□□□ 1.51
PTPN18-205ENST00000428843 DNAJB2P25686 324 aa24.48■■□□□ 1.51
PTPN18-205ENST00000428843 ALCAMQ13740 583 aa24.48■■□□□ 1.51
PTPN18-205ENST00000428843 L1TD1Q5T7N2 865 aaKnown RBP24.48■■□□□ 1.51
PTPN18-205ENST00000428843 ZPBP2Q6X784 338 aa24.48■■□□□ 1.51
PTPN18-205ENST00000428843 PGBD4Q96DM1 585 aa24.48■■□□□ 1.51
PTPN18-205ENST00000428843 LRCH3Q96II8 777 aa24.48■■□□□ 1.51
PTPN18-205ENST00000428843 ZBTB45Q96K62 511 aaPredicted RBP24.48■■□□□ 1.51
PTPN18-205ENST00000428843 NKX2-4Q9H2Z4 354 aa24.48■■□□□ 1.51
PTPN18-205ENST00000428843 NXF3Q9H4D5 531 aaKnown RBP24.48■■□□□ 1.51
PTPN18-205ENST00000428843 RC3H2Q9HBD1 1191 aaKnown RBP24.48■■□□□ 1.51
PTPN18-205ENST00000428843 HES2Q9Y543 173 aa24.48■■□□□ 1.51
PTPN18-205ENST00000428843 LCHNA4D1U4 455 aa24.47■■□□□ 1.51
PTPN18-205ENST00000428843 MEIS3P2A8K0S8 358 aa24.47■■□□□ 1.51
PTPN18-205ENST00000428843 GOLGA6L22H0YM25 854 aa24.47■■□□□ 1.51
PTPN18-205ENST00000428843 PROZP22891 400 aa24.47■■□□□ 1.51
PTPN18-205ENST00000428843 LIG4P49917 911 aa24.47■■□□□ 1.51
PTPN18-205ENST00000428843 KCNA1Q09470 495 aa24.47■■□□□ 1.51
PTPN18-205ENST00000428843 DCAF4L1Q3SXM0 396 aa24.47■■□□□ 1.51
PTPN18-205ENST00000428843 ZNF568Q3ZCX4 644 aa24.47■■□□□ 1.51
PTPN18-205ENST00000428843 ACCSQ96QU6 501 aa24.47■■□□□ 1.51
PTPN18-205ENST00000428843 CDT1Q9H211 546 aa24.47■■□□□ 1.51
PTPN18-205ENST00000428843 SLC39A2Q9NP94 309 aa24.47■■□□□ 1.51
PTPN18-205ENST00000428843 LAMA3Q16787 3333 aa24.46■■□□□ 1.51
PTPN18-205ENST00000428843 ABLIM1O14639 778 aa24.46■■□□□ 1.51
PTPN18-205ENST00000428843 HNRNPDLO14979 420 aaKnown RBP24.46■■□□□ 1.51
PTPN18-205ENST00000428843 TOM1L1O75674 476 aa24.46■■□□□ 1.51
PTPN18-205ENST00000428843 PRPF6O94906 941 aaKnown RBP24.46■■□□□ 1.51
PTPN18-205ENST00000428843 CA3P07451 260 aa24.46■■□□□ 1.51
PTPN18-205ENST00000428843 ITGA4P13612 1032 aa24.46■■□□□ 1.51
PTPN18-205ENST00000428843 CLLU1OSQ5K130 101 aa24.46■■□□□ 1.51
PTPN18-205ENST00000428843 MPZL3Q6UWV2 235 aa24.46■■□□□ 1.51
PTPN18-205ENST00000428843 AGMOQ6ZNB7 445 aa24.46■■□□□ 1.51
PTPN18-205ENST00000428843 STXBP4Q6ZWJ1 553 aa24.46■■□□□ 1.51
PTPN18-205ENST00000428843 EPM2AIP1Q7L775 607 aaPredicted RBP24.46■■□□□ 1.51
PTPN18-205ENST00000428843 APBB1IPQ7Z5R6 666 aaPredicted RBP24.46■■□□□ 1.51
PTPN18-205ENST00000428843 ZBTB33Q86T24 672 aa24.46■■□□□ 1.51
PTPN18-205ENST00000428843 ELOA2Q8IYF1 753 aaPredicted RBP24.46■■□□□ 1.51
PTPN18-205ENST00000428843 SP7Q8TDD2 431 aaPredicted RBP24.46■■□□□ 1.51
PTPN18-205ENST00000428843 TIFAQ96CG3 184 aa24.46■■□□□ 1.51
PTPN18-205ENST00000428843 APOL6Q9BWW8 343 aa24.46■■□□□ 1.51
PTPN18-205ENST00000428843 RNF39Q9H2S5 420 aa24.46■■□□□ 1.51
PTPN18-205ENST00000428843 IKZF4Q9H2S9 585 aa24.46■■□□□ 1.51
PTPN18-205ENST00000428843 ANKFY1Q9P2R3 1169 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms