RNA–Protein interactions for RNA: ENST00000428098.5

DDX39B-208, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-208ENST00000428098 SATB1Q01826 763 aa13.46□□□□□ -0.25
DDX39B-208ENST00000428098 MTSS1LQ765P7 747 aa13.46□□□□□ -0.25
DDX39B-208ENST00000428098 CATIPQ7Z7H3 387 aa13.46□□□□□ -0.25
DDX39B-208ENST00000428098 MRPL10Q7Z7H8 261 aaKnown RBP13.46□□□□□ -0.25
DDX39B-208ENST00000428098 ZNF710Q8N1W2 664 aa13.46□□□□□ -0.25
DDX39B-208ENST00000428098 FAM160A2Q8N612 972 aaPredicted RBP13.46□□□□□ -0.25
DDX39B-208ENST00000428098 SCLT1Q96NL6 688 aa13.46□□□□□ -0.25
DDX39B-208ENST00000428098 PHF20Q9BVI0 1012 aa13.46□□□□□ -0.25
DDX39B-208ENST00000428098 LSM14BQ9BX40 385 aaKnown RBP13.46□□□□□ -0.25
DDX39B-208ENST00000428098 GABBR1Q9UBS5 961 aa13.46□□□□□ -0.25
DDX39B-208ENST00000428098 SEC63Q9UGP8 760 aaKnown RBP13.46□□□□□ -0.25
DDX39B-208ENST00000428098 NDRG2Q9UN36 371 aaKnown RBP13.46□□□□□ -0.25
DDX39B-208ENST00000428098 PCDHB2Q9Y5E7 798 aa13.46□□□□□ -0.25
DDX39B-208ENST00000428098 LAMA1P25391 3075 aa13.45□□□□□ -0.26
DDX39B-208ENST00000428098 SMG1Q96Q15 3661 aaKnown RBP13.45□□□□□ -0.26
DDX39B-208ENST00000428098 A0A087WZ62 844 aa13.45□□□□□ -0.26
DDX39B-208ENST00000428098 FAM86B1E9PN63 330 aa13.45□□□□□ -0.26
DDX39B-208ENST00000428098 TAF4O00268 1085 aa13.45□□□□□ -0.26
DDX39B-208ENST00000428098 GIPC1O14908 333 aa13.45□□□□□ -0.26
DDX39B-208ENST00000428098 FAM86B2P0C5J1 330 aa13.45□□□□□ -0.26
DDX39B-208ENST00000428098 SKIP12755 728 aa13.45□□□□□ -0.26
DDX39B-208ENST00000428098 ANTXR2P58335 489 aa13.45□□□□□ -0.26
DDX39B-208ENST00000428098 STPG1Q5TH74 334 aa13.45□□□□□ -0.26
DDX39B-208ENST00000428098 COLGALT2Q8IYK4 626 aa13.45□□□□□ -0.26
DDX39B-208ENST00000428098 MBOAT7Q96N66 472 aa13.45□□□□□ -0.26
DDX39B-208ENST00000428098 FAM193BQ96PV7 902 aaPredicted RBP13.45□□□□□ -0.26
DDX39B-208ENST00000428098 FDXACB1Q9BRP7 624 aaPredicted RBP13.45□□□□□ -0.26
DDX39B-208ENST00000428098 GCOM2Q9BZD3 368 aaPredicted RBP13.45□□□□□ -0.26
DDX39B-208ENST00000428098 GPR62Q9BZJ7 368 aa13.45□□□□□ -0.26
DDX39B-208ENST00000428098 LMAN1LQ9HAT1 526 aa13.45□□□□□ -0.26
DDX39B-208ENST00000428098 CEP131Q9UPN4 1083 aa13.45□□□□□ -0.26
DDX39B-208ENST00000428098 PIN4Q9Y237 131 aaKnown RBP13.45□□□□□ -0.26
DDX39B-208ENST00000428098 NOTCH4Q99466 2003 aa13.44□□□□□ -0.26
DDX39B-208ENST00000428098 MYH9P35579 1960 aaKnown RBP13.44□□□□□ -0.26
DDX39B-208ENST00000428098 AXIN1O15169 862 aa13.44□□□□□ -0.26
DDX39B-208ENST00000428098 FOXD2O60548 495 aaPredicted RBP13.44□□□□□ -0.26
DDX39B-208ENST00000428098 CXCL12P48061 93 aa13.44□□□□□ -0.26
DDX39B-208ENST00000428098 AASDHQ4L235 1098 aaPredicted RBP13.44□□□□□ -0.26
DDX39B-208ENST00000428098 PSAPL1Q6NUJ1 521 aa13.44□□□□□ -0.26
DDX39B-208ENST00000428098 TYW1BQ6NUM6 668 aa13.44□□□□□ -0.26
DDX39B-208ENST00000428098 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.44□□□□□ -0.26
DDX39B-208ENST00000428098 CCDC82Q8N4S0 544 aa13.44□□□□□ -0.26
DDX39B-208ENST00000428098 URGCPQ8TCY9 931 aa13.44□□□□□ -0.26
DDX39B-208ENST00000428098 PGBD4Q96DM1 585 aa13.44□□□□□ -0.26
DDX39B-208ENST00000428098 MAP3K14Q99558 947 aa13.44□□□□□ -0.26
DDX39B-208ENST00000428098 MIOSQ9NXC5 875 aa13.44□□□□□ -0.26
DDX39B-208ENST00000428098 MRPS17Q9Y2R5 130 aaKnown RBP13.44□□□□□ -0.26
DDX39B-208ENST00000428098 IGLV3-22A0A075B6J6 115 aa13.43□□□□□ -0.26
DDX39B-208ENST00000428098 ERICH2A1L162 156 aa13.43□□□□□ -0.26
DDX39B-208ENST00000428098 IPO5O00410 1097 aaKnown RBP13.43□□□□□ -0.26
DDX39B-208ENST00000428098 NRG2O14511 850 aaPredicted RBP13.43□□□□□ -0.26
DDX39B-208ENST00000428098 ZNF806P0C7X5 589 aa13.43□□□□□ -0.26
DDX39B-208ENST00000428098 OR1G1P47890 313 aa13.43□□□□□ -0.26
DDX39B-208ENST00000428098 UBXN11Q5T124 520 aa13.43□□□□□ -0.26
DDX39B-208ENST00000428098 TANGO2Q6ICL3 276 aa13.43□□□□□ -0.26
DDX39B-208ENST00000428098 PLA2G4DQ86XP0 818 aa13.43□□□□□ -0.26
DDX39B-208ENST00000428098 KSR1Q8IVT5 923 aa13.43□□□□□ -0.26
DDX39B-208ENST00000428098 NPAS3Q8IXF0 933 aa13.43□□□□□ -0.26
DDX39B-208ENST00000428098 ZNF654Q8IZM8 581 aa13.43□□□□□ -0.26
DDX39B-208ENST00000428098 GATA6Q92908 595 aa13.43□□□□□ -0.26
DDX39B-208ENST00000428098 ARRDC1-AS1Q9H2J1 176 aa13.43□□□□□ -0.26
DDX39B-208ENST00000428098 RSAD1Q9HA92 442 aa13.43□□□□□ -0.26
DDX39B-208ENST00000428098 HCFC1R1Q9NWW0 138 aa13.43□□□□□ -0.26
DDX39B-208ENST00000428098 C2orf42Q9NWW7 574 aa13.43□□□□□ -0.26
DDX39B-208ENST00000428098 FNIP2Q9P278 1114 aa13.43□□□□□ -0.26
DDX39B-208ENST00000428098 KANSL3Q9P2N6 904 aa13.43□□□□□ -0.26
DDX39B-208ENST00000428098 RCAN3Q9UKA8 241 aa13.43□□□□□ -0.26
DDX39B-208ENST00000428098 PCDHA10Q9Y5I2 948 aa13.43□□□□□ -0.26
DDX39B-208ENST00000428098 LAMA5O15230 3695 aa13.42□□□□□ -0.26
DDX39B-208ENST00000428098 K7ESF4 209 aa13.42□□□□□ -0.26
DDX39B-208ENST00000428098 CCL16O15467 120 aa13.42□□□□□ -0.26
DDX39B-208ENST00000428098 PSAPP07602 524 aa13.42□□□□□ -0.26
DDX39B-208ENST00000428098 CYP21A2P08686 494 aa13.42□□□□□ -0.26
DDX39B-208ENST00000428098 ZNF76P36508 570 aa13.42□□□□□ -0.26
DDX39B-208ENST00000428098 RAB27AP51159 221 aa13.42□□□□□ -0.26
DDX39B-208ENST00000428098 CCR3P51677 355 aa13.42□□□□□ -0.26
DDX39B-208ENST00000428098 DSC1Q08554 894 aa13.42□□□□□ -0.26
DDX39B-208ENST00000428098 FOXC1Q12948 553 aa13.42□□□□□ -0.26
DDX39B-208ENST00000428098 TRDNQ13061 729 aa13.42□□□□□ -0.26
DDX39B-208ENST00000428098 TARBP2Q15633 366 aaKnown RBP13.42□□□□□ -0.26
DDX39B-208ENST00000428098 SOWAHCQ53LP3 525 aaPredicted RBP13.42□□□□□ -0.26
DDX39B-208ENST00000428098 HEATR6Q6AI08 1181 aaKnown RBP13.42□□□□□ -0.26
DDX39B-208ENST00000428098 PRSS55Q6UWB4 352 aaPredicted RBP13.42□□□□□ -0.26
DDX39B-208ENST00000428098 NIPA1Q7RTP0 329 aa13.42□□□□□ -0.26
DDX39B-208ENST00000428098 CTCFLQ8NI51 663 aaPredicted RBP13.42□□□□□ -0.26
DDX39B-208ENST00000428098 ING5Q8WYH8 240 aa13.42□□□□□ -0.26
DDX39B-208ENST00000428098 RABGGTAQ92696 567 aa13.42□□□□□ -0.26
DDX39B-208ENST00000428098 MCRS1Q96EZ8 462 aa13.42□□□□□ -0.26
DDX39B-208ENST00000428098 CEP89Q96ST8 783 aa13.42□□□□□ -0.26
DDX39B-208ENST00000428098 LZTS2Q9BRK4 669 aa13.42□□□□□ -0.26
DDX39B-208ENST00000428098 ANO3Q9BYT9 981 aa13.42□□□□□ -0.26
DDX39B-208ENST00000428098 RNF39Q9H2S5 420 aa13.42□□□□□ -0.26
DDX39B-208ENST00000428098 SMOC1Q9H4F8 434 aa13.42□□□□□ -0.26
DDX39B-208ENST00000428098 NRBP2Q9NSY0 501 aa13.42□□□□□ -0.26
DDX39B-208ENST00000428098 ECI2O75521 394 aa13.41□□□□□ -0.26
DDX39B-208ENST00000428098 OATP04181 439 aa13.41□□□□□ -0.26
DDX39B-208ENST00000428098 CHRNB1P11230 501 aa13.41□□□□□ -0.26
DDX39B-208ENST00000428098 RXRAP19793 462 aa13.41□□□□□ -0.26
DDX39B-208ENST00000428098 SFPQP23246 707 aaKnown RBP eCLIP13.41□□□□□ -0.26
DDX39B-208ENST00000428098 HOXA11P31270 313 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms