RNA–Protein interactions for RNA: ENST00000427187.6

VNN3-208, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-208ENST00000427187 LAMP2P13473 410 aa9.71□□□□□ -0.86
VNN3-208ENST00000427187 HOXA11P31270 313 aaPredicted RBP9.71□□□□□ -0.86
VNN3-208ENST00000427187 SCNN1GP51170 649 aa9.71□□□□□ -0.86
VNN3-208ENST00000427187 SNW1Q13573 536 aaKnown RBP9.71□□□□□ -0.86
VNN3-208ENST00000427187 NONOQ15233 471 aaKnown RBP eCLIP9.71□□□□□ -0.86
VNN3-208ENST00000427187 RSPO4Q2I0M5 234 aaPredicted RBP9.71□□□□□ -0.86
VNN3-208ENST00000427187 KIAA0319Q5VV43 1072 aa9.71□□□□□ -0.86
VNN3-208ENST00000427187 DCLRE1AQ6PJP8 1040 aa9.71□□□□□ -0.86
VNN3-208ENST00000427187 ZC3H14Q6PJT7 736 aaKnown RBP9.71□□□□□ -0.86
VNN3-208ENST00000427187 Q6ZUG5 572 aa9.71□□□□□ -0.86
VNN3-208ENST00000427187 MRPL10Q7Z7H8 261 aaKnown RBP9.71□□□□□ -0.86
VNN3-208ENST00000427187 COLGALT2Q8IYK4 626 aa9.71□□□□□ -0.86
VNN3-208ENST00000427187 MAML2Q8IZL2 1156 aaPredicted RBP9.71□□□□□ -0.86
VNN3-208ENST00000427187 SUMF1Q8NBK3 374 aa9.71□□□□□ -0.86
VNN3-208ENST00000427187 SMG8Q8ND04 991 aaKnown RBP9.71□□□□□ -0.86
VNN3-208ENST00000427187 PJA1Q8NG27 643 aa9.71□□□□□ -0.86
VNN3-208ENST00000427187 RSPH1Q8WYR4 309 aa9.71□□□□□ -0.86
VNN3-208ENST00000427187 RUBCNQ92622 972 aa9.71□□□□□ -0.86
VNN3-208ENST00000427187 BRF1Q92994 677 aa9.71□□□□□ -0.86
VNN3-208ENST00000427187 ZFP42Q96MM3 310 aa9.71□□□□□ -0.86
VNN3-208ENST00000427187 GAD1Q99259 594 aa9.71□□□□□ -0.86
VNN3-208ENST00000427187 SLC26A6Q9BXS9 759 aa9.71□□□□□ -0.86
VNN3-208ENST00000427187 NT5C3AQ9H0P0 336 aa9.71□□□□□ -0.86
VNN3-208ENST00000427187 SEMA4AQ9H3S1 761 aa9.71□□□□□ -0.86
VNN3-208ENST00000427187 MIOSQ9NXC5 875 aa9.71□□□□□ -0.86
VNN3-208ENST00000427187 WRAP73Q9P2S5 460 aaPredicted RBP9.71□□□□□ -0.86
VNN3-208ENST00000427187 CACNG4Q9UBN1 327 aa9.71□□□□□ -0.86
VNN3-208ENST00000427187 COL4A3BPQ9Y5P4 624 aa9.71□□□□□ -0.86
VNN3-208ENST00000427187 KMT2BQ9UMN6 2715 aaPredicted RBP9.7□□□□□ -0.86
VNN3-208ENST00000427187 MAP1BP46821 2468 aaKnown RBP9.7□□□□□ -0.86
VNN3-208ENST00000427187 ARL5CA6NH57 179 aa9.7□□□□□ -0.86
VNN3-208ENST00000427187 EML1O00423 815 aa9.7□□□□□ -0.86
VNN3-208ENST00000427187 GAS2O43903 313 aaKnown RBP9.7□□□□□ -0.86
VNN3-208ENST00000427187 ITGA4P13612 1032 aa9.7□□□□□ -0.86
VNN3-208ENST00000427187 CD72P21854 359 aa9.7□□□□□ -0.86
VNN3-208ENST00000427187 NLRP5P59047 1200 aa9.7□□□□□ -0.86
VNN3-208ENST00000427187 GPC5P78333 572 aa9.7□□□□□ -0.86
VNN3-208ENST00000427187 CCT2P78371 535 aaKnown RBP9.7□□□□□ -0.86
VNN3-208ENST00000427187 NTHL1P78549 312 aa9.7□□□□□ -0.86
VNN3-208ENST00000427187 CDC42EP1Q00587 391 aa9.7□□□□□ -0.86
VNN3-208ENST00000427187 AKAP17AQ02040 695 aaKnown RBP9.7□□□□□ -0.86
VNN3-208ENST00000427187 HTR4Q13639 388 aa9.7□□□□□ -0.86
VNN3-208ENST00000427187 PHLDB3Q6NSJ2 640 aa9.7□□□□□ -0.86
VNN3-208ENST00000427187 PARM1Q6UWI2 310 aa9.7□□□□□ -0.86
VNN3-208ENST00000427187 B3GNT9Q6UX72 402 aa9.7□□□□□ -0.86
VNN3-208ENST00000427187 RNF168Q8IYW5 571 aaPredicted RBP9.7□□□□□ -0.86
VNN3-208ENST00000427187 CCDC148Q8NFR7 591 aa9.7□□□□□ -0.86
VNN3-208ENST00000427187 BICD2Q8TD16 824 aa9.7□□□□□ -0.86
VNN3-208ENST00000427187 PRPF31Q8WWY3 499 aaKnown RBP9.7□□□□□ -0.86
VNN3-208ENST00000427187 FGF14Q92915 247 aa9.7□□□□□ -0.86
VNN3-208ENST00000427187 CPB2Q96IY4 423 aa9.7□□□□□ -0.86
VNN3-208ENST00000427187 GPR62Q9BZJ7 368 aa9.7□□□□□ -0.86
VNN3-208ENST00000427187 NCOA5Q9HCD5 579 aaKnown RBP9.7□□□□□ -0.86
VNN3-208ENST00000427187 KANSL3Q9P2N6 904 aa9.7□□□□□ -0.86
VNN3-208ENST00000427187 MTF2Q9Y483 593 aaPredicted RBP9.7□□□□□ -0.86
VNN3-208ENST00000427187 IPPQ9Y573 584 aa9.7□□□□□ -0.86
VNN3-208ENST00000427187 CNTNAP2Q9UHC6 1331 aa9.7□□□□□ -0.86
VNN3-208ENST00000427187 PATJQ8NI35 1801 aa9.7□□□□□ -0.86
VNN3-208ENST00000427187 CCDC196A0A1B0GTZ2 297 aa9.69□□□□□ -0.86
VNN3-208ENST00000427187 ANHXE9PGG2 379 aa9.69□□□□□ -0.86
VNN3-208ENST00000427187 SLC37A4O43826 429 aa9.69□□□□□ -0.86
VNN3-208ENST00000427187 EFEMP2O95967 443 aa9.69□□□□□ -0.86
VNN3-208ENST00000427187 NCLP19338 710 aaKnown RBP9.69□□□□□ -0.86
VNN3-208ENST00000427187 USP11P51784 963 aa9.69□□□□□ -0.86
VNN3-208ENST00000427187 RCAN1P53805 252 aa9.69□□□□□ -0.86
VNN3-208ENST00000427187 PSMC5P62195 406 aa9.69□□□□□ -0.86
VNN3-208ENST00000427187 DSG1Q02413 1049 aa9.69□□□□□ -0.86
VNN3-208ENST00000427187 LAMTOR4Q0VGL1 99 aa9.69□□□□□ -0.86
VNN3-208ENST00000427187 NTRK3Q16288 839 aa9.69□□□□□ -0.86
VNN3-208ENST00000427187 Q4G0T1 1027 aa9.69□□□□□ -0.86
VNN3-208ENST00000427187 PRSS55Q6UWB4 352 aaPredicted RBP9.69□□□□□ -0.86
VNN3-208ENST00000427187 GRASPQ7Z6J2 395 aaPredicted RBP9.69□□□□□ -0.86
VNN3-208ENST00000427187 CDR2LQ86X02 465 aaPredicted RBP9.69□□□□□ -0.86
VNN3-208ENST00000427187 RNF149Q8NC42 400 aa9.69□□□□□ -0.86
VNN3-208ENST00000427187 RDM1Q8NG50 284 aa9.69□□□□□ -0.86
VNN3-208ENST00000427187 ETNPPLQ8TBG4 499 aa9.69□□□□□ -0.86
VNN3-208ENST00000427187 HASPINQ8TF76 798 aa9.69□□□□□ -0.86
VNN3-208ENST00000427187 PSPC1Q8WXF1 523 aaKnown RBP9.69□□□□□ -0.86
VNN3-208ENST00000427187 SLC7A3Q8WY07 619 aa9.69□□□□□ -0.86
VNN3-208ENST00000427187 CEP170P1Q96L14 293 aa9.69□□□□□ -0.86
VNN3-208ENST00000427187 PRKD2Q9BZL6 878 aa9.69□□□□□ -0.86
VNN3-208ENST00000427187 RXFP1Q9HBX9 757 aa9.69□□□□□ -0.86
VNN3-208ENST00000427187 CHD8Q9HCK8 2581 aa9.69□□□□□ -0.86
VNN3-208ENST00000427187 SPATA6Q9NWH7 488 aaPredicted RBP9.69□□□□□ -0.86
VNN3-208ENST00000427187 DLL3Q9NYJ7 618 aa9.69□□□□□ -0.86
VNN3-208ENST00000427187 NCDNQ9UBB6 729 aa9.69□□□□□ -0.86
VNN3-208ENST00000427187 STK39Q9UEW8 545 aa9.69□□□□□ -0.86
VNN3-208ENST00000427187 SSX2IPQ9Y2D8 614 aa9.69□□□□□ -0.86
VNN3-208ENST00000427187 ARID2Q68CP9 1835 aa9.68□□□□□ -0.86
VNN3-208ENST00000427187 ZBTB39O15060 712 aa9.68□□□□□ -0.86
VNN3-208ENST00000427187 TSPAN1O60635 241 aa9.68□□□□□ -0.86
VNN3-208ENST00000427187 KINO60870 393 aaKnown RBP9.68□□□□□ -0.86
VNN3-208ENST00000427187 ERLIN2O94905 339 aa9.68□□□□□ -0.86
VNN3-208ENST00000427187 FSHRP23945 695 aa9.68□□□□□ -0.86
VNN3-208ENST00000427187 AKAP5P24588 427 aa9.68□□□□□ -0.86
VNN3-208ENST00000427187 CSTF1Q05048 431 aaKnown RBP9.68□□□□□ -0.86
VNN3-208ENST00000427187 DSC1Q08554 894 aa9.68□□□□□ -0.86
VNN3-208ENST00000427187 UBXN2BQ14CS0 331 aa9.68□□□□□ -0.86
VNN3-208ENST00000427187 EMC2Q15006 297 aa9.68□□□□□ -0.86
VNN3-208ENST00000427187 RTP2Q5QGT7 225 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms