RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 KINO60870 393 aaKnown RBP16.38■□□□□ 0.21
PDAP1-202ENST00000426447 ERLIN2O94905 339 aa16.38■□□□□ 0.21
PDAP1-202ENST00000426447 TDP2O95551 362 aa16.38■□□□□ 0.21
PDAP1-202ENST00000426447 HOXA11P31270 313 aaPredicted RBP16.38■□□□□ 0.21
PDAP1-202ENST00000426447 NPEPPSP55786 919 aa16.38■□□□□ 0.21
PDAP1-202ENST00000426447 DSG1Q02413 1049 aa16.38■□□□□ 0.21
PDAP1-202ENST00000426447 LAMTOR4Q0VGL1 99 aa16.38■□□□□ 0.21
PDAP1-202ENST00000426447 ZNF707Q96C28 371 aaPredicted RBP16.38■□□□□ 0.21
PDAP1-202ENST00000426447 GAD1Q99259 594 aa16.38■□□□□ 0.21
PDAP1-202ENST00000426447 PRKD2Q9BZL6 878 aa16.38■□□□□ 0.21
PDAP1-202ENST00000426447 MINDY3Q9H8M7 445 aa16.38■□□□□ 0.21
PDAP1-202ENST00000426447 ZDHHC7Q9NXF8 308 aa16.38■□□□□ 0.21
PDAP1-202ENST00000426447 DLGAP2Q9P1A6 1054 aa16.38■□□□□ 0.21
PDAP1-202ENST00000426447 NUMBLQ9Y6R0 609 aa16.38■□□□□ 0.21
PDAP1-202ENST00000426447 VPS13AQ96RL7 3174 aa16.38■□□□□ 0.21
PDAP1-202ENST00000426447 DCHS1Q96JQ0 3298 aa16.37■□□□□ 0.21
PDAP1-202ENST00000426447 ARL5CA6NH57 179 aa16.37■□□□□ 0.21
PDAP1-202ENST00000426447 ASAP2O43150 1006 aa16.37■□□□□ 0.21
PDAP1-202ENST00000426447 TGM5O43548 720 aa16.37■□□□□ 0.21
PDAP1-202ENST00000426447 MLH1P40692 756 aa16.37■□□□□ 0.21
PDAP1-202ENST00000426447 QARSP47897 775 aaKnown RBP16.37■□□□□ 0.21
PDAP1-202ENST00000426447 B3GNT9Q6UX72 402 aa16.37■□□□□ 0.21
PDAP1-202ENST00000426447 RNF149Q8NC42 400 aa16.37■□□□□ 0.21
PDAP1-202ENST00000426447 SMG8Q8ND04 991 aaKnown RBP16.37■□□□□ 0.21
PDAP1-202ENST00000426447 PJA1Q8NG27 643 aa16.37■□□□□ 0.21
PDAP1-202ENST00000426447 B3GALT6Q96L58 329 aa16.37■□□□□ 0.21
PDAP1-202ENST00000426447 FOXQ1Q9C009 403 aa16.37■□□□□ 0.21
PDAP1-202ENST00000426447 SH3GLB2Q9NR46 395 aa16.37■□□□□ 0.21
PDAP1-202ENST00000426447 SLC2A4RGQ9NR83 387 aa16.37■□□□□ 0.21
PDAP1-202ENST00000426447 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.37■□□□□ 0.21
PDAP1-202ENST00000426447 BMP2KQ9NSY1 1161 aaPredicted RBP16.37■□□□□ 0.21
PDAP1-202ENST00000426447 IPPQ9Y573 584 aa16.37■□□□□ 0.21
PDAP1-202ENST00000426447 GVINP1Q7Z2Y8 2422 aa16.37■□□□□ 0.21
PDAP1-202ENST00000426447 CYP3A7-CYP3A51PA0A087WV96 503 aa16.36■□□□□ 0.21
PDAP1-202ENST00000426447 ANHXE9PGG2 379 aa16.36■□□□□ 0.21
PDAP1-202ENST00000426447 C1RP00736 705 aa16.36■□□□□ 0.21
PDAP1-202ENST00000426447 FSHRP23945 695 aa16.36■□□□□ 0.21
PDAP1-202ENST00000426447 CYP3A7P24462 503 aa16.36■□□□□ 0.21
PDAP1-202ENST00000426447 SCNN1GP51170 649 aa16.36■□□□□ 0.21
PDAP1-202ENST00000426447 CCT2P78371 535 aaKnown RBP16.36■□□□□ 0.21
PDAP1-202ENST00000426447 IRX6P78412 446 aaPredicted RBP16.36■□□□□ 0.21
PDAP1-202ENST00000426447 SNW1Q13573 536 aaKnown RBP16.36■□□□□ 0.21
PDAP1-202ENST00000426447 HTR4Q13639 388 aa16.36■□□□□ 0.21
PDAP1-202ENST00000426447 RSPO4Q2I0M5 234 aaPredicted RBP16.36■□□□□ 0.21
PDAP1-202ENST00000426447 USP41Q3LFD5 358 aa16.36■□□□□ 0.21
PDAP1-202ENST00000426447 BLOC1S2Q6QNY1 142 aa16.36■□□□□ 0.21
PDAP1-202ENST00000426447 ZNF579Q8NAF0 562 aaKnown RBP16.36■□□□□ 0.21
PDAP1-202ENST00000426447 TCP11Q8WWU5 503 aa16.36■□□□□ 0.21
PDAP1-202ENST00000426447 JAKMIP1Q96N16 626 aaKnown RBP16.36■□□□□ 0.21
PDAP1-202ENST00000426447 APOL6Q9BWW8 343 aa16.36■□□□□ 0.21
PDAP1-202ENST00000426447 BCO2Q9BYV7 579 aa16.36■□□□□ 0.21
PDAP1-202ENST00000426447 RNF39Q9H2S5 420 aa16.36■□□□□ 0.21
PDAP1-202ENST00000426447 CHST7Q9NS84 486 aa16.36■□□□□ 0.21
PDAP1-202ENST00000426447 SPATA6Q9NWH7 488 aaPredicted RBP16.36■□□□□ 0.21
PDAP1-202ENST00000426447 MIOSQ9NXC5 875 aa16.36■□□□□ 0.21
PDAP1-202ENST00000426447 DLL3Q9NYJ7 618 aa16.36■□□□□ 0.21
PDAP1-202ENST00000426447 NCDNQ9UBB6 729 aa16.36■□□□□ 0.21
PDAP1-202ENST00000426447 DDX25Q9UHL0 483 aaKnown RBP16.36■□□□□ 0.21
PDAP1-202ENST00000426447 PCDHA4Q9UN74 947 aa16.36■□□□□ 0.21
PDAP1-202ENST00000426447 ZFP37Q9Y6Q3 630 aaPredicted RBP16.36■□□□□ 0.21
PDAP1-202ENST00000426447 POTEMA6NI47 508 aa16.35■□□□□ 0.21
PDAP1-202ENST00000426447 F8W810 466 aa16.35■□□□□ 0.21
PDAP1-202ENST00000426447 EML1O00423 815 aa16.35■□□□□ 0.21
PDAP1-202ENST00000426447 LAMTOR5O43504 91 aa16.35■□□□□ 0.21
PDAP1-202ENST00000426447 IFNAR1P17181 557 aa16.35■□□□□ 0.21
PDAP1-202ENST00000426447 AXLP30530 894 aa16.35■□□□□ 0.21
PDAP1-202ENST00000426447 RFC5P40937 340 aa16.35■□□□□ 0.21
PDAP1-202ENST00000426447 STARD6P59095 220 aa16.35■□□□□ 0.21
PDAP1-202ENST00000426447 GPC5P78333 572 aa16.35■□□□□ 0.21
PDAP1-202ENST00000426447 CREMQ03060 361 aa16.35■□□□□ 0.21
PDAP1-202ENST00000426447 DSC1Q08554 894 aa16.35■□□□□ 0.21
PDAP1-202ENST00000426447 NTRK3Q16288 839 aa16.35■□□□□ 0.21
PDAP1-202ENST00000426447 NOTUMQ6P988 496 aa16.35■□□□□ 0.21
PDAP1-202ENST00000426447 POTEGQ6S5H5 508 aa16.35■□□□□ 0.21
PDAP1-202ENST00000426447 OTUD6AQ7L8S5 288 aa16.35■□□□□ 0.21
PDAP1-202ENST00000426447 TRIM22Q8IYM9 498 aa16.35■□□□□ 0.21
PDAP1-202ENST00000426447 HACE1Q8IYU2 909 aa16.35■□□□□ 0.21
PDAP1-202ENST00000426447 RNF168Q8IYW5 571 aaPredicted RBP16.35■□□□□ 0.21
PDAP1-202ENST00000426447 ETNPPLQ8TBG4 499 aa16.35■□□□□ 0.21
PDAP1-202ENST00000426447 ZFP42Q96MM3 310 aa16.35■□□□□ 0.21
PDAP1-202ENST00000426447 EIF2AQ9BY44 585 aaKnown RBP16.35■□□□□ 0.21
PDAP1-202ENST00000426447 TRIM6Q9C030 488 aaPredicted RBP16.35■□□□□ 0.21
PDAP1-202ENST00000426447 DHX33Q9H6R0 707 aaKnown RBP16.35■□□□□ 0.21
PDAP1-202ENST00000426447 FNIP2Q9P278 1114 aa16.35■□□□□ 0.21
PDAP1-202ENST00000426447 HES2Q9Y543 173 aa16.35■□□□□ 0.21
PDAP1-202ENST00000426447 PPME1Q9Y570 386 aa16.35■□□□□ 0.21
PDAP1-202ENST00000426447 C2orf16Q68DN1 1984 aa16.35■□□□□ 0.21
PDAP1-202ENST00000426447 KANSL1LA0AUZ9 987 aa16.34■□□□□ 0.21
PDAP1-202ENST00000426447 MARCH6O60337 910 aa16.34■□□□□ 0.21
PDAP1-202ENST00000426447 LRRN2O75325 713 aa16.34■□□□□ 0.21
PDAP1-202ENST00000426447 TADA2AO75478 443 aa16.34■□□□□ 0.21
PDAP1-202ENST00000426447 ZMYND10O75800 440 aa16.34■□□□□ 0.21
PDAP1-202ENST00000426447 P4HBP07237 508 aaKnown RBP16.34■□□□□ 0.21
PDAP1-202ENST00000426447 GLULP15104 373 aa16.34■□□□□ 0.21
PDAP1-202ENST00000426447 RPL17P18621 184 aaKnown RBP16.34■□□□□ 0.21
PDAP1-202ENST00000426447 SSRP1Q08945 709 aaKnown RBP16.34■□□□□ 0.21
PDAP1-202ENST00000426447 VARS2Q5ST30 1063 aaKnown RBP16.34■□□□□ 0.21
PDAP1-202ENST00000426447 FUT10Q6P4F1 479 aa16.34■□□□□ 0.21
PDAP1-202ENST00000426447 LILRA6Q6PI73 481 aa16.34■□□□□ 0.21
PDAP1-202ENST00000426447 GRASPQ7Z6J2 395 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms