RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 NID2Q14112 1375 aa13.67□□□□□ -0.22
HLA-DQB3-203ENST00000425319 PLXNA4Q9HCM2 1894 aa13.67□□□□□ -0.22
HLA-DQB3-203ENST00000425319 FNDC1Q4ZHG4 1894 aaPredicted RBP13.66□□□□□ -0.22
HLA-DQB3-203ENST00000425319 LMNAP02545 664 aaKnown RBP13.66□□□□□ -0.22
HLA-DQB3-203ENST00000425319 CFHP08603 1231 aa13.66□□□□□ -0.22
HLA-DQB3-203ENST00000425319 NPEPPSP55786 919 aa13.66□□□□□ -0.22
HLA-DQB3-203ENST00000425319 POU5F1BQ06416 359 aa13.66□□□□□ -0.22
HLA-DQB3-203ENST00000425319 TMEM132AQ24JP5 1023 aa13.66□□□□□ -0.22
HLA-DQB3-203ENST00000425319 INF2Q27J81 1249 aa13.66□□□□□ -0.22
HLA-DQB3-203ENST00000425319 PLA2G4FQ68DD2 849 aa13.66□□□□□ -0.22
HLA-DQB3-203ENST00000425319 PDXDC1Q6P996 788 aa13.66□□□□□ -0.22
HLA-DQB3-203ENST00000425319 TMEM173Q86WV6 379 aaPredicted RBP13.66□□□□□ -0.22
HLA-DQB3-203ENST00000425319 ETNPPLQ8TBG4 499 aa13.66□□□□□ -0.22
HLA-DQB3-203ENST00000425319 GJA10Q969M2 543 aa13.66□□□□□ -0.22
HLA-DQB3-203ENST00000425319 DHX33Q9H6R0 707 aaKnown RBP13.66□□□□□ -0.22
HLA-DQB3-203ENST00000425319 NCOA5Q9HCD5 579 aaKnown RBP13.66□□□□□ -0.22
HLA-DQB3-203ENST00000425319 SIT1Q9Y3P8 196 aa13.66□□□□□ -0.22
HLA-DQB3-203ENST00000425319 TMEM150BA6NC51 233 aa13.65□□□□□ -0.22
HLA-DQB3-203ENST00000425319 TEX28O15482 410 aa13.65□□□□□ -0.22
HLA-DQB3-203ENST00000425319 STBD1O95210 358 aa13.65□□□□□ -0.22
HLA-DQB3-203ENST00000425319 SRFP11831 508 aa13.65□□□□□ -0.22
HLA-DQB3-203ENST00000425319 NCAPH2Q6IBW4 605 aa13.65□□□□□ -0.22
HLA-DQB3-203ENST00000425319 B3GNT9Q6UX72 402 aa13.65□□□□□ -0.22
HLA-DQB3-203ENST00000425319 FERMT3Q86UX7 667 aa13.65□□□□□ -0.22
HLA-DQB3-203ENST00000425319 PALB2Q86YC2 1186 aa13.65□□□□□ -0.22
HLA-DQB3-203ENST00000425319 TPH2Q8IWU9 490 aa13.65□□□□□ -0.22
HLA-DQB3-203ENST00000425319 SLC44A3Q8N4M1 653 aa13.65□□□□□ -0.22
HLA-DQB3-203ENST00000425319 MBOAT7Q96N66 472 aa13.65□□□□□ -0.22
HLA-DQB3-203ENST00000425319 CEP89Q96ST8 783 aa13.65□□□□□ -0.22
HLA-DQB3-203ENST00000425319 CSRNP2Q9H175 543 aa13.65□□□□□ -0.22
HLA-DQB3-203ENST00000425319 RXFP1Q9HBX9 757 aa13.65□□□□□ -0.22
HLA-DQB3-203ENST00000425319 PARP2Q9UGN5 583 aa13.65□□□□□ -0.22
HLA-DQB3-203ENST00000425319 CLUHO75153 1309 aa13.64□□□□□ -0.23
HLA-DQB3-203ENST00000425319 ARL5CA6NH57 179 aa13.64□□□□□ -0.23
HLA-DQB3-203ENST00000425319 ADAMTS3O15072 1205 aa13.64□□□□□ -0.23
HLA-DQB3-203ENST00000425319 LILRB3O75022 631 aa13.64□□□□□ -0.23
HLA-DQB3-203ENST00000425319 DGAT1O75907 488 aa13.64□□□□□ -0.23
HLA-DQB3-203ENST00000425319 DSG1Q02413 1049 aa13.64□□□□□ -0.23
HLA-DQB3-203ENST00000425319 STK3Q13188 491 aa13.64□□□□□ -0.23
HLA-DQB3-203ENST00000425319 EMC2Q15006 297 aa13.64□□□□□ -0.23
HLA-DQB3-203ENST00000425319 LIN9Q5TKA1 542 aa13.64□□□□□ -0.23
HLA-DQB3-203ENST00000425319 COLGALT2Q8IYK4 626 aa13.64□□□□□ -0.23
HLA-DQB3-203ENST00000425319 SECISBP2LQ93073 1101 aaKnown RBP13.64□□□□□ -0.23
HLA-DQB3-203ENST00000425319 GAD1Q99259 594 aa13.64□□□□□ -0.23
HLA-DQB3-203ENST00000425319 LXNQ9BS40 222 aa13.64□□□□□ -0.23
HLA-DQB3-203ENST00000425319 APOL6Q9BWW8 343 aa13.64□□□□□ -0.23
HLA-DQB3-203ENST00000425319 SMOC2Q9H3U7 446 aa13.64□□□□□ -0.23
HLA-DQB3-203ENST00000425319 FNIP2Q9P278 1114 aa13.64□□□□□ -0.23
HLA-DQB3-203ENST00000425319 EPS15L1Q9UBC2 864 aa13.64□□□□□ -0.23
HLA-DQB3-203ENST00000425319 PCDHA12Q9UN75 941 aa13.64□□□□□ -0.23
HLA-DQB3-203ENST00000425319 IPPQ9Y573 584 aa13.64□□□□□ -0.23
HLA-DQB3-203ENST00000425319 EVPLQ92817 2033 aa13.63□□□□□ -0.23
HLA-DQB3-203ENST00000425319 KIAA1671Q9BY89 1806 aa13.63□□□□□ -0.23
HLA-DQB3-203ENST00000425319 MEIS3P2A8K0S8 358 aa13.63□□□□□ -0.23
HLA-DQB3-203ENST00000425319 NCAM2O15394 837 aa13.63□□□□□ -0.23
HLA-DQB3-203ENST00000425319 PI15O43692 258 aa13.63□□□□□ -0.23
HLA-DQB3-203ENST00000425319 XYLBO75191 536 aa13.63□□□□□ -0.23
HLA-DQB3-203ENST00000425319 LAMP2P13473 410 aa13.63□□□□□ -0.23
HLA-DQB3-203ENST00000425319 HOXA11P31270 313 aaPredicted RBP13.63□□□□□ -0.23
HLA-DQB3-203ENST00000425319 PTENP60484 403 aa13.63□□□□□ -0.23
HLA-DQB3-203ENST00000425319 ELAVL2Q12926 359 aaKnown RBP13.63□□□□□ -0.23
HLA-DQB3-203ENST00000425319 KIAA0319Q5VV43 1072 aa13.63□□□□□ -0.23
HLA-DQB3-203ENST00000425319 PHLDB3Q6NSJ2 640 aa13.63□□□□□ -0.23
HLA-DQB3-203ENST00000425319 APBB1IPQ7Z5R6 666 aaPredicted RBP13.63□□□□□ -0.23
HLA-DQB3-203ENST00000425319 BCL7CQ8WUZ0 217 aaPredicted RBP13.63□□□□□ -0.23
HLA-DQB3-203ENST00000425319 RIN2Q8WYP3 895 aaPredicted RBP13.63□□□□□ -0.23
HLA-DQB3-203ENST00000425319 PRKD2Q9BZL6 878 aa13.63□□□□□ -0.23
HLA-DQB3-203ENST00000425319 NT5C3AQ9H0P0 336 aa13.63□□□□□ -0.23
HLA-DQB3-203ENST00000425319 ZSWIM6Q9HCJ5 1215 aa13.63□□□□□ -0.23
HLA-DQB3-203ENST00000425319 ANKEF1Q9NU02 776 aa13.63□□□□□ -0.23
HLA-DQB3-203ENST00000425319 PDRG1Q9NUG6 133 aa13.63□□□□□ -0.23
HLA-DQB3-203ENST00000425319 CA14Q9ULX7 337 aa13.63□□□□□ -0.23
HLA-DQB3-203ENST00000425319 ZNF318Q5VUA4 2279 aa13.63□□□□□ -0.23
HLA-DQB3-203ENST00000425319 EML1O00423 815 aa13.62□□□□□ -0.23
HLA-DQB3-203ENST00000425319 HNRNPA1P09651 372 aaKnown RBP eCLIP13.62□□□□□ -0.23
HLA-DQB3-203ENST00000425319 XRCC6P12956 609 aaKnown RBP eCLIP13.62□□□□□ -0.23
HLA-DQB3-203ENST00000425319 NPR3P17342 541 aa13.62□□□□□ -0.23
HLA-DQB3-203ENST00000425319 SDHBP21912 280 aa13.62□□□□□ -0.23
HLA-DQB3-203ENST00000425319 MLH1P40692 756 aa13.62□□□□□ -0.23
HLA-DQB3-203ENST00000425319 SCNN1GP51170 649 aa13.62□□□□□ -0.23
HLA-DQB3-203ENST00000425319 PFKPQ01813 784 aa13.62□□□□□ -0.23
HLA-DQB3-203ENST00000425319 TRIM29Q14134 588 aa13.62□□□□□ -0.23
HLA-DQB3-203ENST00000425319 ANKRD1Q15327 319 aa13.62□□□□□ -0.23
HLA-DQB3-203ENST00000425319 SPECC1Q5M775 1068 aa13.62□□□□□ -0.23
HLA-DQB3-203ENST00000425319 CWF19L1Q69YN2 538 aaKnown RBP13.62□□□□□ -0.23
HLA-DQB3-203ENST00000425319 SLC27A1Q6PCB7 646 aa13.62□□□□□ -0.23
HLA-DQB3-203ENST00000425319 DCLRE1AQ6PJP8 1040 aa13.62□□□□□ -0.23
HLA-DQB3-203ENST00000425319 PIK3AP1Q6ZUJ8 805 aa13.62□□□□□ -0.23
HLA-DQB3-203ENST00000425319 MTSS1LQ765P7 747 aa13.62□□□□□ -0.23
HLA-DQB3-203ENST00000425319 ZBTB8OSQ8IWT0 167 aa13.62□□□□□ -0.23
HLA-DQB3-203ENST00000425319 DYDC2Q96IM9 177 aa13.62□□□□□ -0.23
HLA-DQB3-203ENST00000425319 ADPGKQ9BRR6 497 aa13.62□□□□□ -0.23
HLA-DQB3-203ENST00000425319 TM6SF1Q9BZW5 370 aa13.62□□□□□ -0.23
HLA-DQB3-203ENST00000425319 TBC1D17Q9HA65 648 aa13.62□□□□□ -0.23
HLA-DQB3-203ENST00000425319 KCNMB3Q9NPA1 279 aa13.62□□□□□ -0.23
HLA-DQB3-203ENST00000425319 BMP2KQ9NSY1 1161 aaPredicted RBP13.62□□□□□ -0.23
HLA-DQB3-203ENST00000425319 ADAM28Q9UKQ2 775 aa13.62□□□□□ -0.23
HLA-DQB3-203ENST00000425319 SF3B1O75533 1304 aaKnown RBP eCLIP13.62□□□□□ -0.23
HLA-DQB3-203ENST00000425319 MYH9P35579 1960 aaKnown RBP13.62□□□□□ -0.23
HLA-DQB3-203ENST00000425319 LOXHD1Q8IVV2 1947 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms