RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 ASTLQ6HA08 431 aaPredicted RBP16.73■□□□□ 0.27
ATG4B-209ENST00000425239 POTEGQ6S5H5 508 aa16.73■□□□□ 0.27
ATG4B-209ENST00000425239 RNF149Q8NC42 400 aa16.73■□□□□ 0.27
ATG4B-209ENST00000425239 CMASQ8NFW8 434 aaPredicted RBP16.73■□□□□ 0.27
ATG4B-209ENST00000425239 DYDC2Q96IM9 177 aa16.73■□□□□ 0.27
ATG4B-209ENST00000425239 RHOBTB2Q9BYZ6 727 aa16.73■□□□□ 0.27
ATG4B-209ENST00000425239 RXFP1Q9HBX9 757 aa16.73■□□□□ 0.27
ATG4B-209ENST00000425239 CHST7Q9NS84 486 aa16.73■□□□□ 0.27
ATG4B-209ENST00000425239 BMP2KQ9NSY1 1161 aaPredicted RBP16.73■□□□□ 0.27
ATG4B-209ENST00000425239 PDRG1Q9NUG6 133 aa16.73■□□□□ 0.27
ATG4B-209ENST00000425239 STK39Q9UEW8 545 aa16.73■□□□□ 0.27
ATG4B-209ENST00000425239 TPCN1Q9ULQ1 816 aa16.73■□□□□ 0.27
ATG4B-209ENST00000425239 IPPQ9Y573 584 aa16.73■□□□□ 0.27
ATG4B-209ENST00000425239 STK36Q9NRP7 1315 aa16.72■□□□□ 0.27
ATG4B-209ENST00000425239 CCDC194A0A1B0GVG4 234 aa16.72■□□□□ 0.27
ATG4B-209ENST00000425239 ARL5CA6NH57 179 aa16.72■□□□□ 0.27
ATG4B-209ENST00000425239 PI15O43692 258 aa16.72■□□□□ 0.27
ATG4B-209ENST00000425239 PFKFB2O60825 505 aa16.72■□□□□ 0.27
ATG4B-209ENST00000425239 SSBP05455 408 aaKnown RBP eCLIP16.72■□□□□ 0.27
ATG4B-209ENST00000425239 KLRC2P26717 231 aa16.72■□□□□ 0.27
ATG4B-209ENST00000425239 CTTNQ14247 550 aaKnown RBP16.72■□□□□ 0.27
ATG4B-209ENST00000425239 PIK3AP1Q6ZUJ8 805 aa16.72■□□□□ 0.27
ATG4B-209ENST00000425239 ASCL5Q7RTU5 278 aa16.72■□□□□ 0.27
ATG4B-209ENST00000425239 URGCPQ8TCY9 931 aa16.72■□□□□ 0.27
ATG4B-209ENST00000425239 RPS6KC1Q96S38 1066 aa16.72■□□□□ 0.27
ATG4B-209ENST00000425239 EMILIN2Q9BXX0 1053 aa16.72■□□□□ 0.27
ATG4B-209ENST00000425239 SLKQ9H2G2 1235 aaPredicted RBP16.72■□□□□ 0.27
ATG4B-209ENST00000425239 ZSWIM4Q9H7M6 989 aa16.72■□□□□ 0.27
ATG4B-209ENST00000425239 KCNK12Q9HB15 430 aa16.72■□□□□ 0.27
ATG4B-209ENST00000425239 MRPL17Q9NRX2 175 aaKnown RBP16.72■□□□□ 0.27
ATG4B-209ENST00000425239 HES2Q9Y543 173 aa16.72■□□□□ 0.27
ATG4B-209ENST00000425239 RIF1Q5UIP0 2472 aaKnown RBP16.71■□□□□ 0.27
ATG4B-209ENST00000425239 TEX28O15482 410 aa16.71■□□□□ 0.27
ATG4B-209ENST00000425239 GAS2O43903 313 aaKnown RBP16.71■□□□□ 0.27
ATG4B-209ENST00000425239 LYPLA2O95372 231 aa16.71■□□□□ 0.27
ATG4B-209ENST00000425239 ARL2P36404 184 aa16.71■□□□□ 0.27
ATG4B-209ENST00000425239 PCBP1Q15365 356 aaKnown RBP eCLIP16.71■□□□□ 0.27
ATG4B-209ENST00000425239 XKR9Q5GH70 373 aa16.71■□□□□ 0.27
ATG4B-209ENST00000425239 CPLX2Q6PUV4 134 aaKnown RBP16.71■□□□□ 0.27
ATG4B-209ENST00000425239 OTUD6AQ7L8S5 288 aa16.71■□□□□ 0.27
ATG4B-209ENST00000425239 CNNM3Q8NE01 707 aa16.71■□□□□ 0.27
ATG4B-209ENST00000425239 TCP11Q8WWU5 503 aa16.71■□□□□ 0.27
ATG4B-209ENST00000425239 ZFP42Q96MM3 310 aa16.71■□□□□ 0.27
ATG4B-209ENST00000425239 GAD1Q99259 594 aa16.71■□□□□ 0.27
ATG4B-209ENST00000425239 HERC2P3Q9BVR0 1158 aa16.71■□□□□ 0.27
ATG4B-209ENST00000425239 UBN1Q9NPG3 1134 aa16.71■□□□□ 0.27
ATG4B-209ENST00000425239 SPTBN4Q9H254 2564 aa16.71■□□□□ 0.26
ATG4B-209ENST00000425239 MTCL1Q9Y4B5 1905 aaKnown RBP16.7■□□□□ 0.26
ATG4B-209ENST00000425239 PTPRZ1P23471 2315 aaPredicted RBP16.7■□□□□ 0.26
ATG4B-209ENST00000425239 DOCK8Q8NF50 2099 aa16.7■□□□□ 0.26
ATG4B-209ENST00000425239 WNT7AO00755 349 aa16.7■□□□□ 0.26
ATG4B-209ENST00000425239 ITGA4P13612 1032 aa16.7■□□□□ 0.26
ATG4B-209ENST00000425239 AXLP30530 894 aa16.7■□□□□ 0.26
ATG4B-209ENST00000425239 DSG1Q02413 1049 aa16.7■□□□□ 0.26
ATG4B-209ENST00000425239 CYP4A11Q02928 519 aa16.7■□□□□ 0.26
ATG4B-209ENST00000425239 MBTD1Q05BQ5 628 aa16.7■□□□□ 0.26
ATG4B-209ENST00000425239 NR5A1Q13285 461 aa16.7■□□□□ 0.26
ATG4B-209ENST00000425239 TDGQ13569 410 aa16.7■□□□□ 0.26
ATG4B-209ENST00000425239 CCDC149Q6ZUS6 474 aa16.7■□□□□ 0.26
ATG4B-209ENST00000425239 OTOP3Q7RTS5 596 aa16.7■□□□□ 0.26
ATG4B-209ENST00000425239 TMEM87AQ8NBN3 555 aa16.7■□□□□ 0.26
ATG4B-209ENST00000425239 ASAP3Q8TDY4 903 aa16.7■□□□□ 0.26
ATG4B-209ENST00000425239 ZNF707Q96C28 371 aaPredicted RBP16.7■□□□□ 0.26
ATG4B-209ENST00000425239 ACSF2Q96CM8 615 aaPredicted RBP16.7■□□□□ 0.26
ATG4B-209ENST00000425239 CPB2Q96IY4 423 aa16.7■□□□□ 0.26
ATG4B-209ENST00000425239 NFKBIZQ9BYH8 718 aa16.7■□□□□ 0.26
ATG4B-209ENST00000425239 WDR6Q9NNW5 1121 aaKnown RBP16.7■□□□□ 0.26
ATG4B-209ENST00000425239 DUSP12Q9UNI6 340 aa16.7■□□□□ 0.26
ATG4B-209ENST00000425239 TDRD15B5MCY1 1934 aaKnown RBP16.69■□□□□ 0.26
ATG4B-209ENST00000425239 DMXL1Q9Y485 3027 aa16.69■□□□□ 0.26
ATG4B-209ENST00000425239 CCDC195A0A1B0GUA6 201 aa16.69■□□□□ 0.26
ATG4B-209ENST00000425239 C2CD2LO14523 706 aa16.69■□□□□ 0.26
ATG4B-209ENST00000425239 RFPL2O75678 378 aa16.69■□□□□ 0.26
ATG4B-209ENST00000425239 C1RP00736 705 aa16.69■□□□□ 0.26
ATG4B-209ENST00000425239 ARF4P18085 180 aaPredicted RBP16.69■□□□□ 0.26
ATG4B-209ENST00000425239 MLH1P40692 756 aa16.69■□□□□ 0.26
ATG4B-209ENST00000425239 CAPSQ13938 189 aa16.69■□□□□ 0.26
ATG4B-209ENST00000425239 MXD4Q14582 209 aaPredicted RBP16.69■□□□□ 0.26
ATG4B-209ENST00000425239 NCAPH2Q6IBW4 605 aa16.69■□□□□ 0.26
ATG4B-209ENST00000425239 LILRA6Q6PI73 481 aa16.69■□□□□ 0.26
ATG4B-209ENST00000425239 TPH2Q8IWU9 490 aa16.69■□□□□ 0.26
ATG4B-209ENST00000425239 SLFN12Q8IYM2 578 aa16.69■□□□□ 0.26
ATG4B-209ENST00000425239 CCDC51Q96ER9 411 aa16.69■□□□□ 0.26
ATG4B-209ENST00000425239 FAM193BQ96PV7 902 aaPredicted RBP16.69■□□□□ 0.26
ATG4B-209ENST00000425239 MTRQ99707 1265 aa16.69■□□□□ 0.26
ATG4B-209ENST00000425239 NAP1L4Q99733 375 aaKnown RBP16.69■□□□□ 0.26
ATG4B-209ENST00000425239 EIF2AK1Q9BQI3 630 aaKnown RBP16.69■□□□□ 0.26
ATG4B-209ENST00000425239 GPR62Q9BZJ7 368 aa16.69■□□□□ 0.26
ATG4B-209ENST00000425239 CSRNP2Q9H175 543 aa16.69■□□□□ 0.26
ATG4B-209ENST00000425239 MAN1C1Q9NR34 630 aa16.69■□□□□ 0.26
ATG4B-209ENST00000425239 PRG3Q9Y2Y8 225 aaPredicted RBP16.69■□□□□ 0.26
ATG4B-209ENST00000425239 A0A1B0GUA9 196 aa16.68■□□□□ 0.26
ATG4B-209ENST00000425239 PRR23AA6NEV1 266 aa16.68■□□□□ 0.26
ATG4B-209ENST00000425239 NARSO43776 548 aaKnown RBP16.68■□□□□ 0.26
ATG4B-209ENST00000425239 CDKL5O76039 1030 aa16.68■□□□□ 0.26
ATG4B-209ENST00000425239 AOC1P19801 751 aa16.68■□□□□ 0.26
ATG4B-209ENST00000425239 GLRA2P23416 452 aa16.68■□□□□ 0.26
ATG4B-209ENST00000425239 OR1G1P47890 313 aa16.68■□□□□ 0.26
ATG4B-209ENST00000425239 SCNN1GP51170 649 aa16.68■□□□□ 0.26
ATG4B-209ENST00000425239 NOTUMQ6P988 496 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms