RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 STRN3Q13033 797 aa16.36■□□□□ 0.21
CALD1-206ENST00000424922 TSR1Q2NL82 804 aaKnown RBP16.36■□□□□ 0.21
CALD1-206ENST00000424922 VWA3BQ502W6 1294 aa16.36■□□□□ 0.21
CALD1-206ENST00000424922 LRRN4CLQ8ND94 238 aa16.36■□□□□ 0.21
CALD1-206ENST00000424922 BICD1Q96G01 975 aa16.36■□□□□ 0.21
CALD1-206ENST00000424922 ZNF668Q96K58 619 aaPredicted RBP16.36■□□□□ 0.21
CALD1-206ENST00000424922 TTYH3Q9C0H2 523 aa16.36■□□□□ 0.21
CALD1-206ENST00000424922 NDST4Q9H3R1 872 aa16.36■□□□□ 0.21
CALD1-206ENST00000424922 SPC25Q9HBM1 224 aa16.36■□□□□ 0.21
CALD1-206ENST00000424922 A0A1W2PQJ5 194 aa16.35■□□□□ 0.21
CALD1-206ENST00000424922 HNRNPDLO14979 420 aaKnown RBP16.35■□□□□ 0.21
CALD1-206ENST00000424922 SLC16A3O15427 465 aaKnown RBP16.35■□□□□ 0.21
CALD1-206ENST00000424922 EXOC3O60645 756 aa16.35■□□□□ 0.21
CALD1-206ENST00000424922 EPB41P11171 864 aaKnown RBP16.35■□□□□ 0.21
CALD1-206ENST00000424922 MEA1Q16626 185 aa16.35■□□□□ 0.21
CALD1-206ENST00000424922 FBXO38Q6PIJ6 1188 aa16.35■□□□□ 0.21
CALD1-206ENST00000424922 FRMD5Q7Z6J6 570 aa16.35■□□□□ 0.21
CALD1-206ENST00000424922 SLC9A9Q8IVB4 645 aa16.35■□□□□ 0.21
CALD1-206ENST00000424922 TRIM59Q8IWR1 403 aa16.35■□□□□ 0.21
CALD1-206ENST00000424922 PXYLP1Q8TE99 480 aa16.35■□□□□ 0.21
CALD1-206ENST00000424922 LMBR1Q8WVP7 490 aa16.35■□□□□ 0.21
CALD1-206ENST00000424922 NLRP4Q96MN2 994 aa16.35■□□□□ 0.21
CALD1-206ENST00000424922 CARD6Q9BX69 1037 aa16.35■□□□□ 0.21
CALD1-206ENST00000424922 UPF3AQ9H1J1 476 aaKnown RBP16.35■□□□□ 0.21
CALD1-206ENST00000424922 XPNPEP3Q9NQH7 507 aa16.35■□□□□ 0.21
CALD1-206ENST00000424922 ARMCX3Q9UH62 379 aaPredicted RBP16.35■□□□□ 0.21
CALD1-206ENST00000424922 USP20Q9Y2K6 914 aa16.35■□□□□ 0.21
CALD1-206ENST00000424922 FRMD4BQ9Y2L6 1034 aa16.35■□□□□ 0.21
CALD1-206ENST00000424922 RRN3P2A6NIE6 340 aa16.34■□□□□ 0.21
CALD1-206ENST00000424922 HAS3O00219 553 aa16.34■□□□□ 0.21
CALD1-206ENST00000424922 HSPA6P17066 643 aa16.34■□□□□ 0.21
CALD1-206ENST00000424922 SCP2P22307 547 aa16.34■□□□□ 0.21
CALD1-206ENST00000424922 TMOD1P28289 359 aa16.34■□□□□ 0.21
CALD1-206ENST00000424922 PSMC2P35998 433 aaKnown RBP16.34■□□□□ 0.21
CALD1-206ENST00000424922 SNRPFP62306 86 aaKnown RBP16.34■□□□□ 0.21
CALD1-206ENST00000424922 ZNF662Q6ZS27 426 aa16.34■□□□□ 0.21
CALD1-206ENST00000424922 LINC01465Q8N7H1 131 aa16.34■□□□□ 0.21
CALD1-206ENST00000424922 LZTFL1Q9NQ48 299 aa16.34■□□□□ 0.21
CALD1-206ENST00000424922 AKT3Q9Y243 479 aa16.34■□□□□ 0.21
CALD1-206ENST00000424922 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.34■□□□□ 0.21
CALD1-206ENST00000424922 EPN1Q9Y6I3 576 aaPredicted RBP16.34■□□□□ 0.21
CALD1-206ENST00000424922 NRCAMQ92823 1304 aa16.34■□□□□ 0.21
CALD1-206ENST00000424922 BRCA2P51587 3418 aa16.34■□□□□ 0.21
CALD1-206ENST00000424922 MYCNP04198 464 aaPredicted RBP16.34■□□□□ 0.21
CALD1-206ENST00000424922 ADSSP30520 456 aa16.34■□□□□ 0.21
CALD1-206ENST00000424922 TFDP1Q14186 410 aa16.34■□□□□ 0.21
CALD1-206ENST00000424922 MYBPC2Q14324 1141 aa16.34■□□□□ 0.21
CALD1-206ENST00000424922 ARHGAP29Q52LW3 1261 aa16.34■□□□□ 0.21
CALD1-206ENST00000424922 MAP3K21Q5TCX8 1036 aa16.34■□□□□ 0.21
CALD1-206ENST00000424922 SLC39A4Q6P5W5 647 aa16.34■□□□□ 0.21
CALD1-206ENST00000424922 C12orf56Q8IXR9 622 aa16.34■□□□□ 0.21
CALD1-206ENST00000424922 FAM186BQ8IYM0 893 aa16.34■□□□□ 0.21
CALD1-206ENST00000424922 RDH13Q8NBN7 331 aa16.34■□□□□ 0.21
CALD1-206ENST00000424922 KCNN1Q92952 543 aa16.34■□□□□ 0.21
CALD1-206ENST00000424922 KATNAL1Q9BW62 490 aa16.34■□□□□ 0.21
CALD1-206ENST00000424922 TMEM134Q9H6X4 195 aa16.34■□□□□ 0.21
CALD1-206ENST00000424922 HSPBP1Q9NZL4 362 aa16.34■□□□□ 0.21
CALD1-206ENST00000424922 DNAH12Q6ZR08 3092 aa16.34■□□□□ 0.21
CALD1-206ENST00000424922 ASAP2O43150 1006 aa16.33■□□□□ 0.21
CALD1-206ENST00000424922 NDUFA10O95299 355 aa16.33■□□□□ 0.21
CALD1-206ENST00000424922 VTNP04004 478 aa16.33■□□□□ 0.21
CALD1-206ENST00000424922 ARHGAP25P42331 645 aa16.33■□□□□ 0.21
CALD1-206ENST00000424922 EFNA5P52803 228 aa16.33■□□□□ 0.21
CALD1-206ENST00000424922 ZBED6P86452 979 aa16.33■□□□□ 0.21
CALD1-206ENST00000424922 CDK17Q00537 523 aa16.33■□□□□ 0.21
CALD1-206ENST00000424922 PPP2R3AQ06190 1150 aa16.33■□□□□ 0.21
CALD1-206ENST00000424922 FKBP15Q5T1M5 1219 aa16.33■□□□□ 0.21
CALD1-206ENST00000424922 CDCA2Q69YH5 1023 aaPredicted RBP16.33■□□□□ 0.21
CALD1-206ENST00000424922 NFRKBQ6P4R8 1299 aa16.33■□□□□ 0.21
CALD1-206ENST00000424922 CXCL17Q6UXB2 119 aa16.33■□□□□ 0.21
CALD1-206ENST00000424922 ACRBPQ8NEB7 543 aa16.33■□□□□ 0.21
CALD1-206ENST00000424922 ZSWIM2Q8NEG5 633 aa16.33■□□□□ 0.21
CALD1-206ENST00000424922 PPP1R16BQ96T49 567 aa16.33■□□□□ 0.21
CALD1-206ENST00000424922 MKNK1Q9BUB5 465 aa16.33■□□□□ 0.21
CALD1-206ENST00000424922 METTL14Q9HCE5 456 aaKnown RBP16.33■□□□□ 0.21
CALD1-206ENST00000424922 TRIM17Q9Y577 477 aa16.33■□□□□ 0.21
CALD1-206ENST00000424922 FRMPD3Q5JV73 1810 aa16.33■□□□□ 0.2
CALD1-206ENST00000424922 KPNA6O60684 536 aa16.33■□□□□ 0.2
CALD1-206ENST00000424922 ADAMTS4O75173 837 aa16.33■□□□□ 0.2
CALD1-206ENST00000424922 LIG4P49917 911 aa16.33■□□□□ 0.2
CALD1-206ENST00000424922 ZBTB8OSQ8IWT0 167 aa16.33■□□□□ 0.2
CALD1-206ENST00000424922 XXYLT1Q8NBI6 393 aa16.33■□□□□ 0.2
CALD1-206ENST00000424922 TMEM174Q8WUU8 243 aa16.33■□□□□ 0.2
CALD1-206ENST00000424922 POMGNT1Q8WZA1 660 aa16.33■□□□□ 0.2
CALD1-206ENST00000424922 BORCS6Q96GS4 357 aa16.33■□□□□ 0.2
CALD1-206ENST00000424922 INHAP05111 366 aa16.32■□□□□ 0.2
CALD1-206ENST00000424922 EDN1P05305 212 aa16.32■□□□□ 0.2
CALD1-206ENST00000424922 TUBB4BP68371 445 aa16.32■□□□□ 0.2
CALD1-206ENST00000424922 HIC1Q14526 733 aa16.32■□□□□ 0.2
CALD1-206ENST00000424922 DCAF17Q5H9S7 520 aaPredicted RBP16.32■□□□□ 0.2
CALD1-206ENST00000424922 WDR59Q6PJI9 974 aa16.32■□□□□ 0.2
CALD1-206ENST00000424922 RSRC2Q7L4I2 434 aaKnown RBP16.32■□□□□ 0.2
CALD1-206ENST00000424922 KIAA0319LQ8IZA0 1049 aa16.32■□□□□ 0.2
CALD1-206ENST00000424922 CCDC155Q8N6L0 562 aa16.32■□□□□ 0.2
CALD1-206ENST00000424922 SLAIN1Q8ND83 568 aa16.32■□□□□ 0.2
CALD1-206ENST00000424922 CHP1Q99653 195 aa16.32■□□□□ 0.2
CALD1-206ENST00000424922 CCDC113Q9H0I3 377 aa16.32■□□□□ 0.2
CALD1-206ENST00000424922 C2orf40Q9H1Z8 148 aa16.32■□□□□ 0.2
CALD1-206ENST00000424922 GOLGA8IPA6NC78 632 aa16.31■□□□□ 0.2
CALD1-206ENST00000424922 GOLGA8JA6NMD2 632 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms