RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 C7orf72A4D263 438 aa6.86□□□□□ -1.31
LINC00458-201ENST00000423442 SMARCA5O60264 1052 aaPredicted RBP6.86□□□□□ -1.31
LINC00458-201ENST00000423442 SURF6O75683 361 aaKnown RBP6.86□□□□□ -1.31
LINC00458-201ENST00000423442 PLATP00750 562 aa6.86□□□□□ -1.31
LINC00458-201ENST00000423442 FUCA1P04066 466 aa6.86□□□□□ -1.31
LINC00458-201ENST00000423442 ZNF20P17024 532 aa6.86□□□□□ -1.31
LINC00458-201ENST00000423442 PAMP19021 973 aa6.86□□□□□ -1.31
LINC00458-201ENST00000423442 RFX5P48382 616 aaPredicted RBP6.86□□□□□ -1.31
LINC00458-201ENST00000423442 ATP8B2P98198 1209 aa6.86□□□□□ -1.31
LINC00458-201ENST00000423442 HDLBPQ00341 1268 aaKnown RBP6.86□□□□□ -1.31
LINC00458-201ENST00000423442 AMPD2Q01433 879 aa6.86□□□□□ -1.31
LINC00458-201ENST00000423442 MVPQ14764 893 aaKnown RBP6.86□□□□□ -1.31
LINC00458-201ENST00000423442 ATG9AQ7Z3C6 839 aa6.86□□□□□ -1.31
LINC00458-201ENST00000423442 FAM26EQ8N5C1 309 aa6.86□□□□□ -1.31
LINC00458-201ENST00000423442 TMEM57Q8N5G2 664 aa6.86□□□□□ -1.31
LINC00458-201ENST00000423442 ZBED3Q96IU2 234 aaPredicted RBP6.86□□□□□ -1.31
LINC00458-201ENST00000423442 PRMT6Q96LA8 375 aaPredicted RBP6.86□□□□□ -1.31
LINC00458-201ENST00000423442 GBP3Q9H0R5 595 aa6.86□□□□□ -1.31
LINC00458-201ENST00000423442 RCAN3Q9UKA8 241 aa6.86□□□□□ -1.31
LINC00458-201ENST00000423442 PCDHAC2Q9Y5I4 1007 aa6.86□□□□□ -1.31
LINC00458-201ENST00000423442 PPP2R3BQ9Y5P8 575 aa6.86□□□□□ -1.31
LINC00458-201ENST00000423442 COL1A1P02452 1464 aaPredicted RBP6.85□□□□□ -1.31
LINC00458-201ENST00000423442 CLRN2A0PK11 232 aa6.85□□□□□ -1.31
LINC00458-201ENST00000423442 UNCXA6NJT0 531 aa6.85□□□□□ -1.31
LINC00458-201ENST00000423442 LDHCP07864 332 aa6.85□□□□□ -1.31
LINC00458-201ENST00000423442 RACK1P63244 317 aaKnown RBP6.85□□□□□ -1.31
LINC00458-201ENST00000423442 FANCCQ00597 558 aa6.85□□□□□ -1.31
LINC00458-201ENST00000423442 TFCP2Q12800 502 aa6.85□□□□□ -1.31
LINC00458-201ENST00000423442 MTX1Q13505 466 aa6.85□□□□□ -1.31
LINC00458-201ENST00000423442 HSP90AB4PQ58FF6 505 aa6.85□□□□□ -1.31
LINC00458-201ENST00000423442 CCDC158Q5M9N0 1113 aa6.85□□□□□ -1.31
LINC00458-201ENST00000423442 STK32CQ86UX6 486 aa6.85□□□□□ -1.31
LINC00458-201ENST00000423442 ANKRD13AQ8IZ07 590 aa6.85□□□□□ -1.31
LINC00458-201ENST00000423442 CERS5Q8N5B7 392 aa6.85□□□□□ -1.31
LINC00458-201ENST00000423442 VGLL2Q8N8G2 317 aa6.85□□□□□ -1.31
LINC00458-201ENST00000423442 OPTNQ96CV9 577 aa6.85□□□□□ -1.31
LINC00458-201ENST00000423442 SAMD11Q96NU1 681 aa6.85□□□□□ -1.31
LINC00458-201ENST00000423442 NOL10Q9BSC4 688 aaKnown RBP6.85□□□□□ -1.31
LINC00458-201ENST00000423442 C11orf84Q9BUA3 381 aaPredicted RBP6.85□□□□□ -1.31
LINC00458-201ENST00000423442 BACH2Q9BYV9 841 aa6.85□□□□□ -1.31
LINC00458-201ENST00000423442 ARHGAP39Q9C0H5 1083 aa6.85□□□□□ -1.31
LINC00458-201ENST00000423442 BCL11AQ9H165 835 aa6.85□□□□□ -1.31
LINC00458-201ENST00000423442 TDRD3Q9H7E2 651 aaKnown RBP6.85□□□□□ -1.31
LINC00458-201ENST00000423442 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.85□□□□□ -1.31
LINC00458-201ENST00000423442 ZNF70Q9UC06 446 aaPredicted RBP6.85□□□□□ -1.31
LINC00458-201ENST00000423442 ABCF2Q9UG63 623 aa6.85□□□□□ -1.31
LINC00458-201ENST00000423442 PA2G4Q9UQ80 394 aaKnown RBP6.85□□□□□ -1.31
LINC00458-201ENST00000423442 INVSQ9Y283 1065 aa6.85□□□□□ -1.31
LINC00458-201ENST00000423442 UNC80Q8N2C7 3258 aa6.84□□□□□ -1.31
LINC00458-201ENST00000423442 CCL15-CCL14A0A0B4J2E2 113 aa6.84□□□□□ -1.31
LINC00458-201ENST00000423442 TCP10L2B9ZVM9 353 aa6.84□□□□□ -1.31
LINC00458-201ENST00000423442 HMMRO75330 724 aa6.84□□□□□ -1.31
LINC00458-201ENST00000423442 PPM1BO75688 479 aa6.84□□□□□ -1.31
LINC00458-201ENST00000423442 FSHBP01225 129 aa6.84□□□□□ -1.31
LINC00458-201ENST00000423442 UQCRFS1P1P0C7P4 283 aa6.84□□□□□ -1.31
LINC00458-201ENST00000423442 FGFR2P21802 821 aa6.84□□□□□ -1.31
LINC00458-201ENST00000423442 RPL13P26373 211 aaKnown RBP6.84□□□□□ -1.31
LINC00458-201ENST00000423442 THBS2P35442 1172 aa6.84□□□□□ -1.31
LINC00458-201ENST00000423442 SLC7A5Q01650 507 aa6.84□□□□□ -1.31
LINC00458-201ENST00000423442 RASA3Q14644 834 aa6.84□□□□□ -1.31
LINC00458-201ENST00000423442 CCL15Q16663 113 aa6.84□□□□□ -1.31
LINC00458-201ENST00000423442 MBLAC2Q68D91 279 aa6.84□□□□□ -1.31
LINC00458-201ENST00000423442 UBE2Q1Q7Z7E8 422 aa6.84□□□□□ -1.31
LINC00458-201ENST00000423442 DZIP1Q86YF9 867 aaKnown RBP6.84□□□□□ -1.31
LINC00458-201ENST00000423442 ERC1Q8IUD2 1116 aa6.84□□□□□ -1.31
LINC00458-201ENST00000423442 FAM43AQ8N2R8 423 aa6.84□□□□□ -1.31
LINC00458-201ENST00000423442 ARHGEF39Q8N4T4 335 aa6.84□□□□□ -1.31
LINC00458-201ENST00000423442 PLEKHO2Q8TD55 490 aa6.84□□□□□ -1.31
LINC00458-201ENST00000423442 BRI3BPQ8WY22 251 aa6.84□□□□□ -1.31
LINC00458-201ENST00000423442 HTATIP2Q9BUP3 242 aa6.84□□□□□ -1.31
LINC00458-201ENST00000423442 C1QTNF3Q9BXJ4 246 aa6.84□□□□□ -1.31
LINC00458-201ENST00000423442 GINM1Q9NU53 330 aa6.84□□□□□ -1.31
LINC00458-201ENST00000423442 DDX19BQ9UMR2 479 aa6.84□□□□□ -1.31
LINC00458-201ENST00000423442 NR2E3Q9Y5X4 410 aa6.84□□□□□ -1.31
LINC00458-201ENST00000423442 ECM29Q5VYK3 1845 aa6.84□□□□□ -1.31
LINC00458-201ENST00000423442 OTOFQ9HC10 1997 aa6.84□□□□□ -1.32
LINC00458-201ENST00000423442 LAMA3Q16787 3333 aa6.83□□□□□ -1.32
LINC00458-201ENST00000423442 AOX1Q06278 1338 aa6.83□□□□□ -1.32
LINC00458-201ENST00000423442 A0A1B0GUL6 1792 aa6.83□□□□□ -1.32
LINC00458-201ENST00000423442 A0A1B0GUL7 405 aa6.83□□□□□ -1.32
LINC00458-201ENST00000423442 A0A1W2PPC1 479 aa6.83□□□□□ -1.32
LINC00458-201ENST00000423442 A0A1W2PQH9 124 aa6.83□□□□□ -1.32
LINC00458-201ENST00000423442 C1QTNF3-AMACRE9PGA6 284 aa6.83□□□□□ -1.32
LINC00458-201ENST00000423442 NPHS1O60500 1241 aa6.83□□□□□ -1.32
LINC00458-201ENST00000423442 IGSF3O75054 1194 aa6.83□□□□□ -1.32
LINC00458-201ENST00000423442 WDHD1O75717 1129 aaPredicted RBP6.83□□□□□ -1.32
LINC00458-201ENST00000423442 GJA8P48165 433 aa6.83□□□□□ -1.32
LINC00458-201ENST00000423442 GSTO1P78417 241 aa6.83□□□□□ -1.32
LINC00458-201ENST00000423442 MCTP2Q6DN12 878 aa6.83□□□□□ -1.32
LINC00458-201ENST00000423442 Q7L0L9 218 aa6.83□□□□□ -1.32
LINC00458-201ENST00000423442 RPAP2Q8IXW5 612 aaPredicted RBP6.83□□□□□ -1.32
LINC00458-201ENST00000423442 SLC16A11Q8NCK7 471 aa6.83□□□□□ -1.32
LINC00458-201ENST00000423442 KLHL6Q8WZ60 621 aa6.83□□□□□ -1.32
LINC00458-201ENST00000423442 CRBNQ96SW2 442 aa6.83□□□□□ -1.32
LINC00458-201ENST00000423442 CLEC1BQ9P126 229 aa6.83□□□□□ -1.32
LINC00458-201ENST00000423442 LRP2BPQ9P2M1 347 aa6.83□□□□□ -1.32
LINC00458-201ENST00000423442 STAP2Q9UGK3 403 aa6.83□□□□□ -1.32
LINC00458-201ENST00000423442 MYH2Q9UKX2 1941 aa6.82□□□□□ -1.32
LINC00458-201ENST00000423442 PNMA6EA0A0J9YXQ4 647 aa6.82□□□□□ -1.32
LINC00458-201ENST00000423442 SUV39H1O43463 412 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms