RNA–Protein interactions for RNA: ENST00000422704.6

SEMA4D-208, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-208ENST00000422704 SCP2P22307 547 aa11.31□□□□□ -0.6
SEMA4D-208ENST00000422704 SATB1Q01826 763 aa11.31□□□□□ -0.6
SEMA4D-208ENST00000422704 AP3B2Q13367 1082 aa11.31□□□□□ -0.6
SEMA4D-208ENST00000422704 EPM2AIP1Q7L775 607 aaPredicted RBP11.31□□□□□ -0.6
SEMA4D-208ENST00000422704 PODNQ7Z5L7 613 aa11.31□□□□□ -0.6
SEMA4D-208ENST00000422704 TMEM143Q96AN5 459 aa11.31□□□□□ -0.6
SEMA4D-208ENST00000422704 FAM20AQ96MK3 541 aa11.31□□□□□ -0.6
SEMA4D-208ENST00000422704 SPZ1Q9BXG8 430 aa11.31□□□□□ -0.6
SEMA4D-208ENST00000422704 CCSER1Q9C0I3 900 aa11.31□□□□□ -0.6
SEMA4D-208ENST00000422704 MRPL46Q9H2W6 279 aaKnown RBP11.31□□□□□ -0.6
SEMA4D-208ENST00000422704 PPP1R9AQ9ULJ8 1098 aa11.31□□□□□ -0.6
SEMA4D-208ENST00000422704 SLC4A7Q9Y6M7 1214 aa11.31□□□□□ -0.6
SEMA4D-208ENST00000422704 E2F8A0AVK6 867 aa11.31□□□□□ -0.6
SEMA4D-208ENST00000422704 PALM3A6NDB9 673 aaPredicted RBP11.31□□□□□ -0.6
SEMA4D-208ENST00000422704 GRAP2O75791 330 aa11.31□□□□□ -0.6
SEMA4D-208ENST00000422704 TAL1P17542 331 aaPredicted RBP11.31□□□□□ -0.6
SEMA4D-208ENST00000422704 HMGCS2P54868 508 aa11.31□□□□□ -0.6
SEMA4D-208ENST00000422704 PPP2R2AP63151 447 aa11.31□□□□□ -0.6
SEMA4D-208ENST00000422704 RNASELQ05823 741 aaKnown RBP11.31□□□□□ -0.6
SEMA4D-208ENST00000422704 ADCY2Q08462 1091 aa11.31□□□□□ -0.6
SEMA4D-208ENST00000422704 PDIA2Q13087 525 aaKnown RBP11.31□□□□□ -0.6
SEMA4D-208ENST00000422704 PLA2G4FQ68DD2 849 aa11.31□□□□□ -0.6
SEMA4D-208ENST00000422704 NLRP14Q86W24 1093 aa11.31□□□□□ -0.6
SEMA4D-208ENST00000422704 SIX6OS1Q8N1H7 587 aa11.31□□□□□ -0.6
SEMA4D-208ENST00000422704 HVCN1Q96D96 273 aa11.31□□□□□ -0.6
SEMA4D-208ENST00000422704 CYFIP2Q96F07 1278 aa11.31□□□□□ -0.6
SEMA4D-208ENST00000422704 TRIM11Q96F44 468 aa11.31□□□□□ -0.6
SEMA4D-208ENST00000422704 PNKPQ96T60 521 aa11.31□□□□□ -0.6
SEMA4D-208ENST00000422704 KIFC3Q9BVG8 833 aa11.31□□□□□ -0.6
SEMA4D-208ENST00000422704 SDK1Q7Z5N4 2213 aa11.31□□□□□ -0.6
SEMA4D-208ENST00000422704 PODXLO00592 558 aa11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 ORC4O43929 436 aa11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 ZSCAN20P17040 1043 aaPredicted RBP11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 EIF3BP55884 814 aaKnown RBP11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 PSMC1P62191 440 aaKnown RBP11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 ITPK1Q13572 414 aa11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 ZNF699Q32M78 642 aa11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 WDR72Q3MJ13 1102 aa11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 TRMT10CQ7L0Y3 403 aaKnown RBP11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 C4orf33Q8N1A6 199 aa11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 ELMO3Q96BJ8 720 aa11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 CDHR1Q96JP9 859 aa11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 CNOT10Q9H9A5 744 aaKnown RBP11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 MARCOQ9UEW3 520 aaPredicted RBP11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 TNS2Q63HR2 1409 aa11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 LRP6O75581 1613 aa11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 GYG2O15488 501 aa11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 RASA1P20936 1047 aa11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 GNA15P30679 374 aa11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 LONRF1Q17RB8 773 aa11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 NAALADL2Q58DX5 795 aa11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 MDH1BQ5I0G3 518 aa11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 FAM160B2Q86V87 743 aa11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 FGD4Q96M96 766 aa11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 SIK2Q9H0K1 926 aa11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 ALDH8A1Q9H2A2 487 aaPredicted RBP11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 DMGDHQ9UI17 866 aaKnown RBP11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 PNMA2Q9UL42 364 aa11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 PNPLA7Q6ZV29 1317 aa11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 RP1L1Q8IWN7 2480 aaPredicted RBP11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 P4HBP07237 508 aaKnown RBP11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 CSF1RP07333 972 aa11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 SRGNP10124 158 aa11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 MAP7Q14244 749 aa11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 SUPT20HL1Q3ZLR7 823 aa11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 SEZ6Q53EL9 994 aa11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 C1orf228Q6PIY5 440 aa11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 RNF135Q8IUD6 432 aa11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 CCNYL1Q8N7R7 359 aa11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 FLT1P17948 1338 aa11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 A0A1W2PQC6 194 aa11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 COPEO14579 308 aa11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 TJP3O95049 919 aa11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 TOB1P50616 345 aaPredicted RBP11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 OCRLQ01968 901 aa11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 ZNF543Q08ER8 600 aa11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 SPARCL1Q14515 664 aa11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 EZH2Q15910 746 aaKnown RBP11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 SLC18A3Q16572 532 aa11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 KRT39Q6A163 491 aa11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 CCNI2Q6ZMN8 369 aaPredicted RBP11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 ABI1Q8IZP0 508 aa11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 SLC35G2Q8TBE7 412 aa11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 TBC1D16Q8TBP0 767 aa11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 MDM1Q8TC05 714 aa11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 DEPDC1BQ8WUY9 529 aa11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 ACSF2Q96CM8 615 aaPredicted RBP11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 ATP6V1G3Q96LB4 118 aa11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 SYNGAP1Q96PV0 1343 aa11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 SLC9A2Q9UBY0 812 aa11.3□□□□□ -0.6
SEMA4D-208ENST00000422704 MYO9BQ13459 2157 aa11.29□□□□□ -0.6
SEMA4D-208ENST00000422704 KCPQ6ZWJ8 1503 aa11.29□□□□□ -0.6
SEMA4D-208ENST00000422704 RSPH10B2B2RC85 870 aa11.29□□□□□ -0.6
SEMA4D-208ENST00000422704 POLRMTO00411 1230 aaKnown RBP11.29□□□□□ -0.6
SEMA4D-208ENST00000422704 RSPH10BP0C881 870 aa11.29□□□□□ -0.6
SEMA4D-208ENST00000422704 SOX11P35716 441 aa11.29□□□□□ -0.6
SEMA4D-208ENST00000422704 POU5F1BQ06416 359 aa11.29□□□□□ -0.6
SEMA4D-208ENST00000422704 LRRC36Q1X8D7 754 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms