RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 H0YCG3 227 aa10.19□□□□□ -0.78
PDGFC-202ENST00000422544 GOLGA6L22H0YM25 854 aa10.19□□□□□ -0.78
PDGFC-202ENST00000422544 KLRC4O43908 158 aa10.19□□□□□ -0.78
PDGFC-202ENST00000422544 GCNT3O95395 438 aa10.19□□□□□ -0.78
PDGFC-202ENST00000422544 RPN1P04843 607 aaKnown RBP10.19□□□□□ -0.78
PDGFC-202ENST00000422544 MYL1P05976 194 aa10.19□□□□□ -0.78
PDGFC-202ENST00000422544 MYBP10242 640 aa10.19□□□□□ -0.78
PDGFC-202ENST00000422544 ATP2A2P16615 1042 aaKnown RBP10.19□□□□□ -0.78
PDGFC-202ENST00000422544 AXLP30530 894 aa10.19□□□□□ -0.78
PDGFC-202ENST00000422544 CASP5P51878 434 aa10.19□□□□□ -0.78
PDGFC-202ENST00000422544 FAM189BP81408 668 aa10.19□□□□□ -0.78
PDGFC-202ENST00000422544 GTF2BQ00403 316 aa10.19□□□□□ -0.78
PDGFC-202ENST00000422544 DPYDQ12882 1025 aa10.19□□□□□ -0.78
PDGFC-202ENST00000422544 PNOCQ13519 176 aa10.19□□□□□ -0.78
PDGFC-202ENST00000422544 POSTNQ15063 836 aa10.19□□□□□ -0.78
PDGFC-202ENST00000422544 KMT5BQ4FZB7 885 aa10.19□□□□□ -0.78
PDGFC-202ENST00000422544 UBXN11Q5T124 520 aa10.19□□□□□ -0.78
PDGFC-202ENST00000422544 NOTUMQ6P988 496 aa10.19□□□□□ -0.78
PDGFC-202ENST00000422544 FAM43BQ6ZT52 329 aaPredicted RBP10.19□□□□□ -0.78
PDGFC-202ENST00000422544 GLIS3Q8NEA6 775 aa10.19□□□□□ -0.78
PDGFC-202ENST00000422544 PHOSPHO2Q8TCD6 241 aa10.19□□□□□ -0.78
PDGFC-202ENST00000422544 MYLIPQ8WY64 445 aa10.19□□□□□ -0.78
PDGFC-202ENST00000422544 ERCC4Q92889 916 aaPredicted RBP10.19□□□□□ -0.78
PDGFC-202ENST00000422544 TOP1MTQ969P6 601 aa10.19□□□□□ -0.78
PDGFC-202ENST00000422544 CCDC34Q96HJ3 373 aa10.19□□□□□ -0.78
PDGFC-202ENST00000422544 PRIMPOLQ96LW4 560 aa10.19□□□□□ -0.78
PDGFC-202ENST00000422544 TARS2Q9BW92 718 aaKnown RBP10.19□□□□□ -0.78
PDGFC-202ENST00000422544 EIF2AQ9BY44 585 aaKnown RBP10.19□□□□□ -0.78
PDGFC-202ENST00000422544 PCDHB7Q9Y5E2 793 aa10.19□□□□□ -0.78
PDGFC-202ENST00000422544 CNTNAP2Q9UHC6 1331 aa10.18□□□□□ -0.78
PDGFC-202ENST00000422544 A0A0U1RQF3 1178 aa10.18□□□□□ -0.78
PDGFC-202ENST00000422544 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.18□□□□□ -0.78
PDGFC-202ENST00000422544 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.18□□□□□ -0.78
PDGFC-202ENST00000422544 PPP1R37O75864 691 aa10.18□□□□□ -0.78
PDGFC-202ENST00000422544 PRPF6O94906 941 aaKnown RBP10.18□□□□□ -0.78
PDGFC-202ENST00000422544 COL9A1P20849 921 aa10.18□□□□□ -0.78
PDGFC-202ENST00000422544 SARSP49591 514 aaKnown RBP10.18□□□□□ -0.78
PDGFC-202ENST00000422544 RABGGTBP53611 331 aa10.18□□□□□ -0.78
PDGFC-202ENST00000422544 EHHADHQ08426 723 aa10.18□□□□□ -0.78
PDGFC-202ENST00000422544 KCNA1Q09470 495 aa10.18□□□□□ -0.78
PDGFC-202ENST00000422544 FAM26FQ5R3K3 315 aa10.18□□□□□ -0.78
PDGFC-202ENST00000422544 ATF7IP2Q5U623 682 aa10.18□□□□□ -0.78
PDGFC-202ENST00000422544 EEF1DP3Q658K8 133 aa10.18□□□□□ -0.78
PDGFC-202ENST00000422544 ECHDC2Q86YB7 292 aa10.18□□□□□ -0.78
PDGFC-202ENST00000422544 HERC6Q8IVU3 1022 aa10.18□□□□□ -0.78
PDGFC-202ENST00000422544 CRIPAKQ8N1N5 446 aa10.18□□□□□ -0.78
PDGFC-202ENST00000422544 RNF169Q8NCN4 708 aa10.18□□□□□ -0.78
PDGFC-202ENST00000422544 MAFAQ8NHW3 353 aaPredicted RBP10.18□□□□□ -0.78
PDGFC-202ENST00000422544 KCNN1Q92952 543 aa10.18□□□□□ -0.78
PDGFC-202ENST00000422544 CCDC51Q96ER9 411 aa10.18□□□□□ -0.78
PDGFC-202ENST00000422544 SLC9A7Q96T83 725 aa10.18□□□□□ -0.78
PDGFC-202ENST00000422544 ACO2Q99798 780 aaKnown RBP10.18□□□□□ -0.78
PDGFC-202ENST00000422544 ZBED2Q9BTP6 218 aa10.18□□□□□ -0.78
PDGFC-202ENST00000422544 TRAIPQ9BWF2 469 aa10.18□□□□□ -0.78
PDGFC-202ENST00000422544 STRA6Q9BX79 667 aa10.18□□□□□ -0.78
PDGFC-202ENST00000422544 MRPL4Q9BYD3 311 aaKnown RBP10.18□□□□□ -0.78
PDGFC-202ENST00000422544 IKZF4Q9H2S9 585 aa10.18□□□□□ -0.78
PDGFC-202ENST00000422544 ST6GALNAC4Q9H4F1 302 aa10.18□□□□□ -0.78
PDGFC-202ENST00000422544 PDZD7Q9H5P4 517 aa10.18□□□□□ -0.78
PDGFC-202ENST00000422544 SLC39A2Q9NP94 309 aa10.18□□□□□ -0.78
PDGFC-202ENST00000422544 OLFML3Q9NRN5 406 aa10.18□□□□□ -0.78
PDGFC-202ENST00000422544 FAM105AQ9NUU6 356 aa10.18□□□□□ -0.78
PDGFC-202ENST00000422544 EXOC1Q9NV70 894 aa10.18□□□□□ -0.78
PDGFC-202ENST00000422544 HOOK1Q9UJC3 728 aaKnown RBP10.18□□□□□ -0.78
PDGFC-202ENST00000422544 LRFN2Q9ULH4 789 aa10.18□□□□□ -0.78
PDGFC-202ENST00000422544 PCDHB2Q9Y5E7 798 aa10.18□□□□□ -0.78
PDGFC-202ENST00000422544 PCDHB13Q9Y5F0 798 aa10.18□□□□□ -0.78
PDGFC-202ENST00000422544 TANC1Q9C0D5 1861 aa10.18□□□□□ -0.78
PDGFC-202ENST00000422544 BRWD1Q9NSI6 2320 aa10.18□□□□□ -0.78
PDGFC-202ENST00000422544 N4BP3O15049 544 aa10.17□□□□□ -0.78
PDGFC-202ENST00000422544 GJB5O95377 273 aa10.17□□□□□ -0.78
PDGFC-202ENST00000422544 NPTXRO95502 500 aa10.17□□□□□ -0.78
PDGFC-202ENST00000422544 STAG3L1P0CL83 205 aa10.17□□□□□ -0.78
PDGFC-202ENST00000422544 SKIP12755 728 aa10.17□□□□□ -0.78
PDGFC-202ENST00000422544 MYOGP15173 224 aa10.17□□□□□ -0.78
PDGFC-202ENST00000422544 SCP2P22307 547 aa10.17□□□□□ -0.78
PDGFC-202ENST00000422544 MCM4P33991 863 aa10.17□□□□□ -0.78
PDGFC-202ENST00000422544 PBX2P40425 430 aa10.17□□□□□ -0.78
PDGFC-202ENST00000422544 GATMP50440 423 aa10.17□□□□□ -0.78
PDGFC-202ENST00000422544 STK4Q13043 487 aa10.17□□□□□ -0.78
PDGFC-202ENST00000422544 CAMK4Q16566 473 aa10.17□□□□□ -0.78
PDGFC-202ENST00000422544 L1TD1Q5T7N2 865 aaKnown RBP10.17□□□□□ -0.78
PDGFC-202ENST00000422544 SLC27A1Q6PCB7 646 aa10.17□□□□□ -0.78
PDGFC-202ENST00000422544 ZBTB33Q86T24 672 aa10.17□□□□□ -0.78
PDGFC-202ENST00000422544 NPAS4Q8IUM7 802 aa10.17□□□□□ -0.78
PDGFC-202ENST00000422544 ELOA2Q8IYF1 753 aaPredicted RBP10.17□□□□□ -0.78
PDGFC-202ENST00000422544 GPT2Q8TD30 523 aa10.17□□□□□ -0.78
PDGFC-202ENST00000422544 LPPQ93052 612 aa10.17□□□□□ -0.78
PDGFC-202ENST00000422544 BICD1Q96G01 975 aa10.17□□□□□ -0.78
PDGFC-202ENST00000422544 ZBTB45Q96K62 511 aaPredicted RBP10.17□□□□□ -0.78
PDGFC-202ENST00000422544 TCHPQ9BT92 498 aa10.17□□□□□ -0.78
PDGFC-202ENST00000422544 TRIM6Q9C030 488 aaPredicted RBP10.17□□□□□ -0.78
PDGFC-202ENST00000422544 ELAC1Q9H777 363 aaKnown RBP10.17□□□□□ -0.78
PDGFC-202ENST00000422544 PTPRHQ9HD43 1115 aa10.17□□□□□ -0.78
PDGFC-202ENST00000422544 TMEM161AQ9NX61 479 aa10.17□□□□□ -0.78
PDGFC-202ENST00000422544 TNFSF13BQ9Y275 285 aa10.17□□□□□ -0.78
PDGFC-202ENST00000422544 HES2Q9Y543 173 aa10.17□□□□□ -0.78
PDGFC-202ENST00000422544 PCDHA5Q9Y5H7 936 aa10.17□□□□□ -0.78
PDGFC-202ENST00000422544 SIP14410 1827 aa10.17□□□□□ -0.78
PDGFC-202ENST00000422544 LOXHD1Q8IVV2 1947 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms