RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 IMPG1Q17R60 797 aa13.08□□□□□ -0.31
CLCN4-203ENST00000421085 DCAF15Q66K64 600 aa13.08□□□□□ -0.31
CLCN4-203ENST00000421085 OR6B3Q8NGW1 331 aa13.08□□□□□ -0.31
CLCN4-203ENST00000421085 SNRNP27Q8WVK2 155 aaKnown RBP13.08□□□□□ -0.31
CLCN4-203ENST00000421085 EDEM3Q9BZQ6 932 aa13.08□□□□□ -0.31
CLCN4-203ENST00000421085 CPVLQ9H3G5 476 aa13.08□□□□□ -0.31
CLCN4-203ENST00000421085 AGPAT5Q9NUQ2 364 aa13.08□□□□□ -0.31
CLCN4-203ENST00000421085 CHCHD3Q9NX63 227 aaKnown RBP13.08□□□□□ -0.31
CLCN4-203ENST00000421085 SLC5A4Q9NY91 659 aa13.08□□□□□ -0.31
CLCN4-203ENST00000421085 PCDHA6Q9UN73 950 aa13.08□□□□□ -0.31
CLCN4-203ENST00000421085 PCDHA8Q9Y5H6 950 aa13.08□□□□□ -0.31
CLCN4-203ENST00000421085 PHF2O75151 1096 aa13.08□□□□□ -0.32
CLCN4-203ENST00000421085 KRT75O95678 551 aa13.08□□□□□ -0.32
CLCN4-203ENST00000421085 CTCFP49711 727 aaPredicted RBP13.08□□□□□ -0.32
CLCN4-203ENST00000421085 EXOC8Q8IYI6 725 aa13.08□□□□□ -0.32
CLCN4-203ENST00000421085 TMEM260Q9NX78 707 aa13.08□□□□□ -0.32
CLCN4-203ENST00000421085 DDX56Q9NY93 547 aaKnown RBP13.08□□□□□ -0.32
CLCN4-203ENST00000421085 ATP11BQ9Y2G3 1177 aa13.08□□□□□ -0.32
CLCN4-203ENST00000421085 NYAP1Q6ZVC0 841 aa13.08□□□□□ -0.32
CLCN4-203ENST00000421085 RNF135Q8IUD6 432 aa13.08□□□□□ -0.32
CLCN4-203ENST00000421085 GALNT4Q8N4A0 578 aa13.08□□□□□ -0.32
CLCN4-203ENST00000421085 EME1Q96AY2 570 aa13.08□□□□□ -0.32
CLCN4-203ENST00000421085 ATXN7L3BQ96GX2 97 aa13.08□□□□□ -0.32
CLCN4-203ENST00000421085 CDHR1Q96JP9 859 aa13.08□□□□□ -0.32
CLCN4-203ENST00000421085 ACAP3Q96P50 834 aa13.08□□□□□ -0.32
CLCN4-203ENST00000421085 FAM213AQ9BRX8 229 aa13.08□□□□□ -0.32
CLCN4-203ENST00000421085 FBXO2Q9UK22 296 aaPredicted RBP13.08□□□□□ -0.32
CLCN4-203ENST00000421085 PLEKHG1Q9ULL1 1385 aa13.08□□□□□ -0.32
CLCN4-203ENST00000421085 FAM47DPA6NHR8 397 aa13.08□□□□□ -0.32
CLCN4-203ENST00000421085 KRT7P08729 469 aa13.08□□□□□ -0.32
CLCN4-203ENST00000421085 GNA15P30679 374 aa13.08□□□□□ -0.32
CLCN4-203ENST00000421085 TRIP10Q15642 601 aa13.08□□□□□ -0.32
CLCN4-203ENST00000421085 USPL1Q5W0Q7 1092 aa13.08□□□□□ -0.32
CLCN4-203ENST00000421085 HEATR6Q6AI08 1181 aaKnown RBP13.08□□□□□ -0.32
CLCN4-203ENST00000421085 PDXDC2PQ6P474 469 aa13.08□□□□□ -0.32
CLCN4-203ENST00000421085 ZBTB10Q96DT7 871 aa13.08□□□□□ -0.32
CLCN4-203ENST00000421085 MARCOQ9UEW3 520 aaPredicted RBP13.08□□□□□ -0.32
CLCN4-203ENST00000421085 USP17L5A8MUK1 530 aa13.08□□□□□ -0.32
CLCN4-203ENST00000421085 NMT2O60551 498 aa13.08□□□□□ -0.32
CLCN4-203ENST00000421085 BTKQ06187 659 aa13.08□□□□□ -0.32
CLCN4-203ENST00000421085 SLC18A3Q16572 532 aa13.08□□□□□ -0.32
CLCN4-203ENST00000421085 FASTKD1Q53R41 847 aaKnown RBP13.08□□□□□ -0.32
CLCN4-203ENST00000421085 ENAHQ8N8S7 591 aaPredicted RBP13.08□□□□□ -0.32
CLCN4-203ENST00000421085 SLC35G2Q8TBE7 412 aa13.08□□□□□ -0.32
CLCN4-203ENST00000421085 RNF139Q8WU17 664 aa13.08□□□□□ -0.32
CLCN4-203ENST00000421085 TMEM120BA0PK00 339 aa13.07□□□□□ -0.32
CLCN4-203ENST00000421085 CDH16O75309 829 aa13.07□□□□□ -0.32
CLCN4-203ENST00000421085 C1orf228Q6PIY5 440 aa13.07□□□□□ -0.32
CLCN4-203ENST00000421085 DDIASQ8IXT1 998 aa13.07□□□□□ -0.32
CLCN4-203ENST00000421085 ASAP1Q9ULH1 1129 aa13.07□□□□□ -0.32
CLCN4-203ENST00000421085 ABCA5Q8WWZ7 1642 aa13.07□□□□□ -0.32
CLCN4-203ENST00000421085 UBAP1LF5GYI3 381 aa13.07□□□□□ -0.32
CLCN4-203ENST00000421085 PSMD14O00487 310 aa13.07□□□□□ -0.32
CLCN4-203ENST00000421085 PJA2O43164 708 aa13.07□□□□□ -0.32
CLCN4-203ENST00000421085 AP3B2Q13367 1082 aa13.07□□□□□ -0.32
CLCN4-203ENST00000421085 THNSL1Q8IYQ7 743 aa13.07□□□□□ -0.32
CLCN4-203ENST00000421085 TMCO5AQ8N6Q1 288 aa13.07□□□□□ -0.32
CLCN4-203ENST00000421085 MTBPQ96DY7 904 aa13.07□□□□□ -0.32
CLCN4-203ENST00000421085 AGPAT1Q99943 283 aa13.07□□□□□ -0.32
CLCN4-203ENST00000421085 ASPSCR1Q9BZE9 553 aa13.07□□□□□ -0.32
CLCN4-203ENST00000421085 ARHGAP31Q2M1Z3 1444 aa13.07□□□□□ -0.32
CLCN4-203ENST00000421085 SLC16A4O15374 487 aa13.07□□□□□ -0.32
CLCN4-203ENST00000421085 CYP2D6P10635 497 aa13.07□□□□□ -0.32
CLCN4-203ENST00000421085 CRKLP46109 303 aaKnown RBP13.07□□□□□ -0.32
CLCN4-203ENST00000421085 ATXN3P54252 364 aaPredicted RBP13.07□□□□□ -0.32
CLCN4-203ENST00000421085 NLRP10Q86W26 655 aa13.07□□□□□ -0.32
CLCN4-203ENST00000421085 HNRNPLLQ8WVV9 542 aaKnown RBP13.07□□□□□ -0.32
CLCN4-203ENST00000421085 TMA16Q96EY4 203 aaKnown RBP13.07□□□□□ -0.32
CLCN4-203ENST00000421085 POTEFA5A3E0 1075 aa13.07□□□□□ -0.32
CLCN4-203ENST00000421085 TMEM247A6NEH6 219 aa13.07□□□□□ -0.32
CLCN4-203ENST00000421085 AKAP10O43572 662 aa13.07□□□□□ -0.32
CLCN4-203ENST00000421085 POTEIP0CG38 1075 aa13.07□□□□□ -0.32
CLCN4-203ENST00000421085 SRGNP10124 158 aa13.07□□□□□ -0.32
CLCN4-203ENST00000421085 ATP2C1P98194 919 aaPredicted RBP13.07□□□□□ -0.32
CLCN4-203ENST00000421085 INPP5AQ14642 412 aa13.07□□□□□ -0.32
CLCN4-203ENST00000421085 P3H1Q32P28 736 aa13.07□□□□□ -0.32
CLCN4-203ENST00000421085 ERFEQ4G0M1 354 aa13.07□□□□□ -0.32
CLCN4-203ENST00000421085 POTEGQ6S5H5 508 aa13.07□□□□□ -0.32
CLCN4-203ENST00000421085 POTEEQ6S8J3 1075 aa13.07□□□□□ -0.32
CLCN4-203ENST00000421085 PADI6Q6TGC4 694 aa13.07□□□□□ -0.32
CLCN4-203ENST00000421085 TEKT4Q8WW24 435 aa13.07□□□□□ -0.32
CLCN4-203ENST00000421085 SGSM3Q96HU1 749 aa13.07□□□□□ -0.32
CLCN4-203ENST00000421085 PAWRQ96IZ0 340 aaKnown RBP13.07□□□□□ -0.32
CLCN4-203ENST00000421085 EIF2AK2P19525 551 aaKnown RBP13.07□□□□□ -0.32
CLCN4-203ENST00000421085 SSTR3P32745 418 aaPredicted RBP13.07□□□□□ -0.32
CLCN4-203ENST00000421085 PRELPP51888 382 aa13.07□□□□□ -0.32
CLCN4-203ENST00000421085 CRYMQ14894 314 aa13.07□□□□□ -0.32
CLCN4-203ENST00000421085 SYDE1Q6ZW31 735 aaPredicted RBP13.07□□□□□ -0.32
CLCN4-203ENST00000421085 RBM15Q96T37 977 aaKnown RBP eCLIP13.07□□□□□ -0.32
CLCN4-203ENST00000421085 ADD3Q9UEY8 706 aaKnown RBP13.07□□□□□ -0.32
CLCN4-203ENST00000421085 ZBTB1Q9Y2K1 713 aa13.07□□□□□ -0.32
CLCN4-203ENST00000421085 B2RBV5 119 aa13.06□□□□□ -0.32
CLCN4-203ENST00000421085 NEMP1O14524 444 aa13.06□□□□□ -0.32
CLCN4-203ENST00000421085 TRIM49P0CI25 452 aa13.06□□□□□ -0.32
CLCN4-203ENST00000421085 TRIM49CP0CI26 452 aa13.06□□□□□ -0.32
CLCN4-203ENST00000421085 MRPL28Q13084 256 aaKnown RBP13.06□□□□□ -0.32
CLCN4-203ENST00000421085 KCNB1Q14721 858 aa13.06□□□□□ -0.32
CLCN4-203ENST00000421085 ZNF699Q32M78 642 aa13.06□□□□□ -0.32
CLCN4-203ENST00000421085 CYGBQ8WWM9 190 aa13.06□□□□□ -0.32
CLCN4-203ENST00000421085 NLRP4Q96MN2 994 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms