RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 NR2F2P24468 414 aa15.77■□□□□ 0.11
NCKIPSD-204ENST00000416649 BTDP43251 543 aa15.77■□□□□ 0.11
NCKIPSD-204ENST00000416649 TFAP4Q01664 338 aa15.77■□□□□ 0.11
NCKIPSD-204ENST00000416649 DHX34Q14147 1143 aaKnown RBP15.77■□□□□ 0.11
NCKIPSD-204ENST00000416649 CRY2Q49AN0 593 aa15.77■□□□□ 0.11
NCKIPSD-204ENST00000416649 ZC2HC1CQ53FD0 456 aaPredicted RBP15.77■□□□□ 0.11
NCKIPSD-204ENST00000416649 ZNF772Q68DY9 489 aaPredicted RBP15.77■□□□□ 0.11
NCKIPSD-204ENST00000416649 CCDC137Q6PK04 289 aaKnown RBP15.77■□□□□ 0.11
NCKIPSD-204ENST00000416649 BTNL9Q6UXG8 535 aa15.77■□□□□ 0.11
NCKIPSD-204ENST00000416649 ZNF513Q8N8E2 541 aaPredicted RBP15.77■□□□□ 0.11
NCKIPSD-204ENST00000416649 CTNNBL1Q8WYA6 563 aaPredicted RBP15.77■□□□□ 0.11
NCKIPSD-204ENST00000416649 SPOCK2Q92563 424 aa15.77■□□□□ 0.11
NCKIPSD-204ENST00000416649 RAD54LQ92698 747 aa15.77■□□□□ 0.11
NCKIPSD-204ENST00000416649 SH3GLB2Q9NR46 395 aa15.77■□□□□ 0.11
NCKIPSD-204ENST00000416649 TMEM260Q9NX78 707 aa15.77■□□□□ 0.11
NCKIPSD-204ENST00000416649 BZW2Q9Y6E2 419 aaKnown RBP15.77■□□□□ 0.11
NCKIPSD-204ENST00000416649 IGSF9BQ9UPX0 1349 aa15.76■□□□□ 0.11
NCKIPSD-204ENST00000416649 ABLIM1O14639 778 aa15.76■□□□□ 0.11
NCKIPSD-204ENST00000416649 CREB3O43889 395 aa15.76■□□□□ 0.11
NCKIPSD-204ENST00000416649 KRT79Q5XKE5 535 aa15.76■□□□□ 0.11
NCKIPSD-204ENST00000416649 MIGA2Q7L4E1 593 aa15.76■□□□□ 0.11
NCKIPSD-204ENST00000416649 WDR66Q8TBY9 1149 aa15.76■□□□□ 0.11
NCKIPSD-204ENST00000416649 UBA5Q9GZZ9 404 aa15.76■□□□□ 0.11
NCKIPSD-204ENST00000416649 LRMDAQ9H2I8 198 aa15.76■□□□□ 0.11
NCKIPSD-204ENST00000416649 TAOK3Q9H2K8 898 aa15.76■□□□□ 0.11
NCKIPSD-204ENST00000416649 CDC42EP4Q9H3Q1 356 aaKnown RBP15.76■□□□□ 0.11
NCKIPSD-204ENST00000416649 MKNK2Q9HBH9 465 aa15.76■□□□□ 0.11
NCKIPSD-204ENST00000416649 STK17AQ9UEE5 414 aa15.76■□□□□ 0.11
NCKIPSD-204ENST00000416649 CHORDC1Q9UHD1 332 aaPredicted RBP15.76■□□□□ 0.11
NCKIPSD-204ENST00000416649 AJAP1Q9UKB5 411 aaPredicted RBP15.76■□□□□ 0.11
NCKIPSD-204ENST00000416649 LY75O60449 1722 aa15.76■□□□□ 0.11
NCKIPSD-204ENST00000416649 DDX3YO15523 660 aaKnown RBP15.76■□□□□ 0.11
NCKIPSD-204ENST00000416649 SKIP12755 728 aa15.76■□□□□ 0.11
NCKIPSD-204ENST00000416649 GSTT1P30711 240 aa15.76■□□□□ 0.11
NCKIPSD-204ENST00000416649 RCN1Q15293 331 aa15.76■□□□□ 0.11
NCKIPSD-204ENST00000416649 TMEM266Q2M3C6 531 aa15.76■□□□□ 0.11
NCKIPSD-204ENST00000416649 SNX30Q5VWJ9 437 aa15.76■□□□□ 0.11
NCKIPSD-204ENST00000416649 IRGCQ6NXR0 463 aa15.76■□□□□ 0.11
NCKIPSD-204ENST00000416649 CLEC10AQ8IUN9 316 aa15.76■□□□□ 0.11
NCKIPSD-204ENST00000416649 POP1Q99575 1024 aaKnown RBP15.76■□□□□ 0.11
NCKIPSD-204ENST00000416649 BARHL2Q9NY43 387 aa15.76■□□□□ 0.11
NCKIPSD-204ENST00000416649 CTTNBP2NLQ9P2B4 639 aa15.76■□□□□ 0.11
NCKIPSD-204ENST00000416649 CHKBQ9Y259 395 aa15.76■□□□□ 0.11
NCKIPSD-204ENST00000416649 CACNA1SQ13698 1873 aa15.76■□□□□ 0.11
NCKIPSD-204ENST00000416649 ARAP2Q8WZ64 1704 aa15.75■□□□□ 0.11
NCKIPSD-204ENST00000416649 hCG_2014768A0A024R1R8 64 aa15.75■□□□□ 0.11
NCKIPSD-204ENST00000416649 E7ENQ6 273 aa15.75■□□□□ 0.11
NCKIPSD-204ENST00000416649 KRT18P05783 430 aaKnown RBP15.75■□□□□ 0.11
NCKIPSD-204ENST00000416649 RARGP13631 454 aa15.75■□□□□ 0.11
NCKIPSD-204ENST00000416649 SKIV2L2P42285 1042 aaKnown RBP15.75■□□□□ 0.11
NCKIPSD-204ENST00000416649 GNAQP50148 359 aa15.75■□□□□ 0.11
NCKIPSD-204ENST00000416649 CALCOCO2Q13137 446 aa15.75■□□□□ 0.11
NCKIPSD-204ENST00000416649 PARP6Q2NL67 630 aa15.75■□□□□ 0.11
NCKIPSD-204ENST00000416649 KHDC1Q4VXA5 237 aaKnown RBP15.75■□□□□ 0.11
NCKIPSD-204ENST00000416649 ZCWPW2Q504Y3 356 aa15.75■□□□□ 0.11
NCKIPSD-204ENST00000416649 RNF43Q68DV7 783 aa15.75■□□□□ 0.11
NCKIPSD-204ENST00000416649 RFWD3Q6PCD5 774 aa15.75■□□□□ 0.11
NCKIPSD-204ENST00000416649 SCG3Q8WXD2 468 aaKnown RBP15.75■□□□□ 0.11
NCKIPSD-204ENST00000416649 SLCO1B3Q9NPD5 702 aa15.75■□□□□ 0.11
NCKIPSD-204ENST00000416649 STOML1Q9UBI4 398 aa15.75■□□□□ 0.11
NCKIPSD-204ENST00000416649 RASA1P20936 1047 aa15.75■□□□□ 0.11
NCKIPSD-204ENST00000416649 MARCKSL1P49006 195 aa15.75■□□□□ 0.11
NCKIPSD-204ENST00000416649 DYNC1I2Q13409 638 aaKnown RBP15.75■□□□□ 0.11
NCKIPSD-204ENST00000416649 MTFR1Q15390 333 aa15.75■□□□□ 0.11
NCKIPSD-204ENST00000416649 SLC35G1Q2M3R5 365 aa15.75■□□□□ 0.11
NCKIPSD-204ENST00000416649 TTC27Q6P3X3 843 aa15.75■□□□□ 0.11
NCKIPSD-204ENST00000416649 KRT25Q7Z3Z0 450 aa15.75■□□□□ 0.11
NCKIPSD-204ENST00000416649 ZNF333Q96JL9 665 aa15.75■□□□□ 0.11
NCKIPSD-204ENST00000416649 NDNQ99608 321 aa15.75■□□□□ 0.11
NCKIPSD-204ENST00000416649 BMP2KQ9NSY1 1161 aaPredicted RBP15.75■□□□□ 0.11
NCKIPSD-204ENST00000416649 A0A1W2PRG0 241 aa15.74■□□□□ 0.11
NCKIPSD-204ENST00000416649 ETS2P15036 469 aa15.74■□□□□ 0.11
NCKIPSD-204ENST00000416649 FOXN2P32314 431 aa15.74■□□□□ 0.11
NCKIPSD-204ENST00000416649 VHLP40337 213 aa15.74■□□□□ 0.11
NCKIPSD-204ENST00000416649 POLGP54098 1239 aaPredicted RBP15.74■□□□□ 0.11
NCKIPSD-204ENST00000416649 POTEAQ6S8J7 498 aa15.74■□□□□ 0.11
NCKIPSD-204ENST00000416649 SPIRE2Q8WWL2 714 aa15.74■□□□□ 0.11
NCKIPSD-204ENST00000416649 BRIP1Q9BX63 1249 aa15.74■□□□□ 0.11
NCKIPSD-204ENST00000416649 ZC3H12CQ9C0D7 883 aaKnown RBP15.74■□□□□ 0.11
NCKIPSD-204ENST00000416649 PICK1Q9NRD5 415 aa15.74■□□□□ 0.11
NCKIPSD-204ENST00000416649 LRCH1Q9Y2L9 728 aa15.74■□□□□ 0.11
NCKIPSD-204ENST00000416649 USH1CQ9Y6N9 552 aa15.74■□□□□ 0.11
NCKIPSD-204ENST00000416649 IRS2Q9Y4H2 1338 aa15.74■□□□□ 0.11
NCKIPSD-204ENST00000416649 PHF2O75151 1096 aa15.74■□□□□ 0.11
NCKIPSD-204ENST00000416649 SPAG7O75391 227 aa15.74■□□□□ 0.11
NCKIPSD-204ENST00000416649 TDP2O95551 362 aa15.74■□□□□ 0.11
NCKIPSD-204ENST00000416649 GNA14O95837 355 aa15.74■□□□□ 0.11
NCKIPSD-204ENST00000416649 PON1P27169 355 aa15.74■□□□□ 0.11
NCKIPSD-204ENST00000416649 CACNB3P54284 484 aa15.74■□□□□ 0.11
NCKIPSD-204ENST00000416649 CTTNQ14247 550 aaKnown RBP15.74■□□□□ 0.11
NCKIPSD-204ENST00000416649 PPP2R5EQ16537 467 aa15.74■□□□□ 0.11
NCKIPSD-204ENST00000416649 KYNUQ16719 465 aa15.74■□□□□ 0.11
NCKIPSD-204ENST00000416649 ARHGEF18Q6ZSZ5 1173 aa15.74■□□□□ 0.11
NCKIPSD-204ENST00000416649 RFX8Q6ZV50 586 aa15.74■□□□□ 0.11
NCKIPSD-204ENST00000416649 NLGN1Q8N2Q7 840 aa15.74■□□□□ 0.11
NCKIPSD-204ENST00000416649 PRELID2Q8N945 189 aa15.74■□□□□ 0.11
NCKIPSD-204ENST00000416649 ARHGEF26Q96DR7 871 aa15.74■□□□□ 0.11
NCKIPSD-204ENST00000416649 CEP63Q96MT8 703 aa15.74■□□□□ 0.11
NCKIPSD-204ENST00000416649 RUNDC3BQ96NL0 473 aa15.74■□□□□ 0.11
NCKIPSD-204ENST00000416649 CARD9Q9H257 536 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms