RNA–Protein interactions for RNA: ENST00000416529.5

RBM39-209, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 594 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-209ENST00000416529 MTIF3Q9H2K0 278 aaKnown RBP8.5□□□□□ -1.05
RBM39-209ENST00000416529 BHMT2Q9H2M3 363 aa8.5□□□□□ -1.05
RBM39-209ENST00000416529 ST6GALNAC4Q9H4F1 302 aa8.5□□□□□ -1.05
RBM39-209ENST00000416529 BCAS3Q9H6U6 928 aa8.5□□□□□ -1.05
RBM39-209ENST00000416529 CHST12Q9NRB3 414 aa8.5□□□□□ -1.05
RBM39-209ENST00000416529 OLFML3Q9NRN5 406 aa8.5□□□□□ -1.05
RBM39-209ENST00000416529 RGL1Q9NZL6 768 aa8.5□□□□□ -1.05
RBM39-209ENST00000416529 TBX21Q9UL17 535 aa8.5□□□□□ -1.05
RBM39-209ENST00000416529 COL4A3BPQ9Y5P4 624 aa8.5□□□□□ -1.05
RBM39-209ENST00000416529 TRIP12Q14669 1992 aaPredicted RBP8.5□□□□□ -1.05
RBM39-209ENST00000416529 ZMYM2Q9UBW7 1377 aa8.49□□□□□ -1.05
RBM39-209ENST00000416529 A0A1W2PPC1 479 aa8.49□□□□□ -1.05
RBM39-209ENST00000416529 MEN1O00255 615 aa8.49□□□□□ -1.05
RBM39-209ENST00000416529 GPR182O15218 404 aa8.49□□□□□ -1.05
RBM39-209ENST00000416529 DTNBO60941 627 aa8.49□□□□□ -1.05
RBM39-209ENST00000416529 TIMP1P01033 207 aa8.49□□□□□ -1.05
RBM39-209ENST00000416529 CYP2C9P11712 490 aa8.49□□□□□ -1.05
RBM39-209ENST00000416529 SKIP12755 728 aa8.49□□□□□ -1.05
RBM39-209ENST00000416529 PLCG1P19174 1290 aa8.49□□□□□ -1.05
RBM39-209ENST00000416529 ARL2P36404 184 aa8.49□□□□□ -1.05
RBM39-209ENST00000416529 ZNF131P52739 623 aa8.49□□□□□ -1.05
RBM39-209ENST00000416529 SLC12A3P55017 1021 aa8.49□□□□□ -1.05
RBM39-209ENST00000416529 MRPS6P82932 125 aaKnown RBP8.49□□□□□ -1.05
RBM39-209ENST00000416529 CYP4A11Q02928 519 aa8.49□□□□□ -1.05
RBM39-209ENST00000416529 FAAP100Q0VG06 881 aa8.49□□□□□ -1.05
RBM39-209ENST00000416529 DMP1Q13316 513 aaPredicted RBP8.49□□□□□ -1.05
RBM39-209ENST00000416529 EMC2Q15006 297 aa8.49□□□□□ -1.05
RBM39-209ENST00000416529 FAM187BQ17R55 369 aa8.49□□□□□ -1.05
RBM39-209ENST00000416529 CT47A1Q5JQC4 288 aaPredicted RBP8.49□□□□□ -1.05
RBM39-209ENST00000416529 GDF6Q6KF10 455 aaPredicted RBP8.49□□□□□ -1.05
RBM39-209ENST00000416529 RINT1Q6NUQ1 792 aa8.49□□□□□ -1.05
RBM39-209ENST00000416529 EFCAB12Q6NXP0 572 aa8.49□□□□□ -1.05
RBM39-209ENST00000416529 FOXR2Q6PJQ5 311 aa8.49□□□□□ -1.05
RBM39-209ENST00000416529 KIAA0319LQ8IZA0 1049 aa8.49□□□□□ -1.05
RBM39-209ENST00000416529 EPSTI1Q96J88 318 aa8.49□□□□□ -1.05
RBM39-209ENST00000416529 C7orf25Q9BPX7 421 aa8.49□□□□□ -1.05
RBM39-209ENST00000416529 TRAIPQ9BWF2 469 aa8.49□□□□□ -1.05
RBM39-209ENST00000416529 GCOM2Q9BZD3 368 aaPredicted RBP8.49□□□□□ -1.05
RBM39-209ENST00000416529 BLOC1S4Q9NUP1 217 aa8.49□□□□□ -1.05
RBM39-209ENST00000416529 TMEM39AQ9NV64 488 aa8.49□□□□□ -1.05
RBM39-209ENST00000416529 SETD4Q9NVD3 440 aa8.49□□□□□ -1.05
RBM39-209ENST00000416529 CGNQ9P2M7 1197 aaKnown RBP8.49□□□□□ -1.05
RBM39-209ENST00000416529 TTC28Q96AY4 2481 aa8.48□□□□□ -1.05
RBM39-209ENST00000416529 FRMD3A2A2Y4 597 aa8.48□□□□□ -1.05
RBM39-209ENST00000416529 RSPH10B2B2RC85 870 aa8.48□□□□□ -1.05
RBM39-209ENST00000416529 KIAA0391O15091 583 aaKnown RBP8.48□□□□□ -1.05
RBM39-209ENST00000416529 TREHO43280 583 aa8.48□□□□□ -1.05
RBM39-209ENST00000416529 KINO60870 393 aaKnown RBP8.48□□□□□ -1.05
RBM39-209ENST00000416529 BAIAP3O94812 1187 aa8.48□□□□□ -1.05
RBM39-209ENST00000416529 SMC2O95347 1197 aa8.48□□□□□ -1.05
RBM39-209ENST00000416529 CXCL10P02778 98 aa8.48□□□□□ -1.05
RBM39-209ENST00000416529 RSPH10BP0C881 870 aa8.48□□□□□ -1.05
RBM39-209ENST00000416529 PFKFB1P16118 471 aa8.48□□□□□ -1.05
RBM39-209ENST00000416529 SFPQP23246 707 aaKnown RBP eCLIP8.48□□□□□ -1.05
RBM39-209ENST00000416529 PHKA2P46019 1235 aa8.48□□□□□ -1.05
RBM39-209ENST00000416529 KARSQ15046 597 aaKnown RBP8.48□□□□□ -1.05
RBM39-209ENST00000416529 UGCGQ16739 394 aa8.48□□□□□ -1.05
RBM39-209ENST00000416529 KYAT1Q16773 422 aa8.48□□□□□ -1.05
RBM39-209ENST00000416529 TRIM71Q2Q1W2 868 aaKnown RBP8.48□□□□□ -1.05
RBM39-209ENST00000416529 TRIM60Q495X7 471 aa8.48□□□□□ -1.05
RBM39-209ENST00000416529 MTERF2Q49AM1 385 aa8.48□□□□□ -1.05
RBM39-209ENST00000416529 WDR44Q5JSH3 913 aa8.48□□□□□ -1.05
RBM39-209ENST00000416529 MFSD5Q6N075 450 aa8.48□□□□□ -1.05
RBM39-209ENST00000416529 PRICKLE2Q7Z3G6 844 aa8.48□□□□□ -1.05
RBM39-209ENST00000416529 TRIM50Q86XT4 487 aa8.48□□□□□ -1.05
RBM39-209ENST00000416529 CCDC65Q8IXS2 484 aa8.48□□□□□ -1.05
RBM39-209ENST00000416529 TRIML1Q8N9V2 468 aa8.48□□□□□ -1.05
RBM39-209ENST00000416529 CNNM3Q8NE01 707 aa8.48□□□□□ -1.05
RBM39-209ENST00000416529 TMEM174Q8WUU8 243 aa8.48□□□□□ -1.05
RBM39-209ENST00000416529 SYAP1Q96A49 352 aaPredicted RBP8.48□□□□□ -1.05
RBM39-209ENST00000416529 CLIC6Q96NY7 704 aa8.48□□□□□ -1.05
RBM39-209ENST00000416529 GSDMAQ96QA5 445 aa8.48□□□□□ -1.05
RBM39-209ENST00000416529 TSPAN18Q96SJ8 248 aa8.48□□□□□ -1.05
RBM39-209ENST00000416529 NOC4LQ9BVI4 516 aaKnown RBP8.48□□□□□ -1.05
RBM39-209ENST00000416529 CELF4Q9BZC1 486 aaKnown RBP8.48□□□□□ -1.05
RBM39-209ENST00000416529 FTOQ9C0B1 505 aaKnown RBP eCLIP8.48□□□□□ -1.051e-8■□□□□ 10.4
RBM39-209ENST00000416529 HIPK3Q9H422 1215 aa8.48□□□□□ -1.05
RBM39-209ENST00000416529 PARVGQ9HBI0 331 aa8.48□□□□□ -1.05
RBM39-209ENST00000416529 RMND1Q9NWS8 449 aa8.48□□□□□ -1.05
RBM39-209ENST00000416529 SUCLA2Q9P2R7 463 aaPredicted RBP8.48□□□□□ -1.05
RBM39-209ENST00000416529 TRPV2Q9Y5S1 764 aa8.48□□□□□ -1.05
RBM39-209ENST00000416529 UBE4BO95155 1302 aa8.48□□□□□ -1.05
RBM39-209ENST00000416529 MYH11P35749 1972 aa8.48□□□□□ -1.05
RBM39-209ENST00000416529 ARID2Q68CP9 1835 aa8.47□□□□□ -1.05
RBM39-209ENST00000416529 ABHD14A-ACY1A0A1B0GW23 586 aa8.47□□□□□ -1.05
RBM39-209ENST00000416529 A0A1W2PRU2 124 aa8.47□□□□□ -1.05
RBM39-209ENST00000416529 POLR2DO15514 142 aaKnown RBP8.47□□□□□ -1.05
RBM39-209ENST00000416529 B4GALT4O60513 344 aa8.47□□□□□ -1.05
RBM39-209ENST00000416529 PQBP1O60828 265 aaKnown RBP8.47□□□□□ -1.05
RBM39-209ENST00000416529 TBCAO75347 108 aaKnown RBP8.47□□□□□ -1.05
RBM39-209ENST00000416529 ZNF202O95125 648 aa8.47□□□□□ -1.05
RBM39-209ENST00000416529 LETM1O95202 739 aaPredicted RBP8.47□□□□□ -1.05
RBM39-209ENST00000416529 CKBP12277 381 aa8.47□□□□□ -1.05
RBM39-209ENST00000416529 ACTN1P12814 892 aa8.47□□□□□ -1.05
RBM39-209ENST00000416529 PLS3P13797 630 aa8.47□□□□□ -1.05
RBM39-209ENST00000416529 RAG1P15918 1043 aa8.47□□□□□ -1.05
RBM39-209ENST00000416529 SYN1P17600 705 aa8.47□□□□□ -1.05
RBM39-209ENST00000416529 EIF4BP23588 611 aaKnown RBP8.47□□□□□ -1.05
RBM39-209ENST00000416529 MARK3P27448 753 aa8.47□□□□□ -1.05
RBM39-209ENST00000416529 BMP8BP34820 402 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms