RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 PDZD7Q9H5P4 517 aa18.11■□□□□ 0.49
LINC00398-201ENST00000414407 TBX20Q9UMR3 447 aa18.11■□□□□ 0.49
LINC00398-201ENST00000414407 TNFSF13BQ9Y275 285 aa18.11■□□□□ 0.49
LINC00398-201ENST00000414407 YBX2Q9Y2T7 364 aaKnown RBP18.11■□□□□ 0.49
LINC00398-201ENST00000414407 PCDHB2Q9Y5E7 798 aa18.11■□□□□ 0.49
LINC00398-201ENST00000414407 COL4A6Q14031 1691 aa18.11■□□□□ 0.49
LINC00398-201ENST00000414407 TTLL13PA6NNM8 815 aa18.1■□□□□ 0.49
LINC00398-201ENST00000414407 GTPBP6O43824 516 aaPredicted RBP18.1■□□□□ 0.49
LINC00398-201ENST00000414407 EDN1P05305 212 aa18.1■□□□□ 0.49
LINC00398-201ENST00000414407 ATF7P17544 494 aaPredicted RBP18.1■□□□□ 0.49
LINC00398-201ENST00000414407 NMT1P30419 496 aaKnown RBP18.1■□□□□ 0.49
LINC00398-201ENST00000414407 FXR1P51114 621 aaKnown RBP eCLIP18.1■□□□□ 0.49
LINC00398-201ENST00000414407 COASYQ13057 564 aa18.1■□□□□ 0.49
LINC00398-201ENST00000414407 TMEM132AQ24JP5 1023 aa18.1■□□□□ 0.49
LINC00398-201ENST00000414407 TPRNQ4KMQ1 711 aa18.1■□□□□ 0.49
LINC00398-201ENST00000414407 ATF7IP2Q5U623 682 aa18.1■□□□□ 0.49
LINC00398-201ENST00000414407 CMTR2Q8IYT2 770 aaKnown RBP18.1■□□□□ 0.49
LINC00398-201ENST00000414407 ACO2Q99798 780 aaKnown RBP18.1■□□□□ 0.49
LINC00398-201ENST00000414407 ADPGKQ9BRR6 497 aa18.1■□□□□ 0.49
LINC00398-201ENST00000414407 MRPL44Q9H9J2 332 aaKnown RBP18.1■□□□□ 0.49
LINC00398-201ENST00000414407 PTPRHQ9HD43 1115 aa18.1■□□□□ 0.49
LINC00398-201ENST00000414407 UBN1Q9NPG3 1134 aa18.1■□□□□ 0.49
LINC00398-201ENST00000414407 PPP1R37O75864 691 aa18.09■□□□□ 0.49
LINC00398-201ENST00000414407 PIGRP01833 764 aa18.09■□□□□ 0.49
LINC00398-201ENST00000414407 EHHADHQ08426 723 aa18.09■□□□□ 0.49
LINC00398-201ENST00000414407 CUL4BQ13620 913 aa18.09■□□□□ 0.49
LINC00398-201ENST00000414407 DCAF4L1Q3SXM0 396 aa18.09■□□□□ 0.49
LINC00398-201ENST00000414407 ELOA2Q8IYF1 753 aaPredicted RBP18.09■□□□□ 0.49
LINC00398-201ENST00000414407 GRAMD1CQ8IYS0 662 aa18.09■□□□□ 0.49
LINC00398-201ENST00000414407 HACE1Q8IYU2 909 aa18.09■□□□□ 0.49
LINC00398-201ENST00000414407 SMG8Q8ND04 991 aaKnown RBP18.09■□□□□ 0.49
LINC00398-201ENST00000414407 LRCH3Q96II8 777 aa18.09■□□□□ 0.49
LINC00398-201ENST00000414407 GBP4Q96PP9 640 aa18.09■□□□□ 0.49
LINC00398-201ENST00000414407 EIF2AQ9BY44 585 aaKnown RBP18.09■□□□□ 0.49
LINC00398-201ENST00000414407 TRIM6Q9C030 488 aaPredicted RBP18.09■□□□□ 0.49
LINC00398-201ENST00000414407 TMEM117Q9H0C3 514 aa18.09■□□□□ 0.49
LINC00398-201ENST00000414407 BLZF1Q9H2G9 400 aa18.09■□□□□ 0.49
LINC00398-201ENST00000414407 SLC28A3Q9HAS3 691 aa18.09■□□□□ 0.49
LINC00398-201ENST00000414407 PCDHB13Q9Y5F0 798 aa18.09■□□□□ 0.49
LINC00398-201ENST00000414407 GADD45BO75293 160 aaPredicted RBP18.08■□□□□ 0.48
LINC00398-201ENST00000414407 TOM1L1O75674 476 aa18.08■□□□□ 0.48
LINC00398-201ENST00000414407 CA3P07451 260 aa18.08■□□□□ 0.48
LINC00398-201ENST00000414407 MYOGP15173 224 aa18.08■□□□□ 0.48
LINC00398-201ENST00000414407 PROZP22891 400 aa18.08■□□□□ 0.48
LINC00398-201ENST00000414407 STXBP4Q6ZWJ1 553 aa18.08■□□□□ 0.48
LINC00398-201ENST00000414407 MAP4K3Q8IVH8 894 aa18.08■□□□□ 0.48
LINC00398-201ENST00000414407 TARS2Q9BW92 718 aaKnown RBP18.08■□□□□ 0.48
LINC00398-201ENST00000414407 NKX2-4Q9H2Z4 354 aa18.08■□□□□ 0.48
LINC00398-201ENST00000414407 RNF19AQ9NV58 838 aa18.08■□□□□ 0.48
LINC00398-201ENST00000414407 IPPQ9Y573 584 aa18.08■□□□□ 0.48
LINC00398-201ENST00000414407 ZMYM2Q9UBW7 1377 aa18.07■□□□□ 0.48
LINC00398-201ENST00000414407 KLRC4O43908 158 aa18.07■□□□□ 0.48
LINC00398-201ENST00000414407 PRPF40AO75400 957 aaKnown RBP18.07■□□□□ 0.48
LINC00398-201ENST00000414407 NPTXRO95502 500 aa18.07■□□□□ 0.48
LINC00398-201ENST00000414407 CASP1P29466 404 aa18.07■□□□□ 0.48
LINC00398-201ENST00000414407 PSMD2Q13200 908 aa18.07■□□□□ 0.48
LINC00398-201ENST00000414407 BTG3Q14201 252 aaPredicted RBP18.07■□□□□ 0.48
LINC00398-201ENST00000414407 ZC2HC1CQ53FD0 456 aaPredicted RBP18.07■□□□□ 0.48
LINC00398-201ENST00000414407 EEF1DP3Q658K8 133 aa18.07■□□□□ 0.48
LINC00398-201ENST00000414407 MPZL3Q6UWV2 235 aa18.07■□□□□ 0.48
LINC00398-201ENST00000414407 ABI1Q8IZP0 508 aa18.07■□□□□ 0.48
LINC00398-201ENST00000414407 FIBCD1Q8N539 461 aa18.07■□□□□ 0.48
LINC00398-201ENST00000414407 RNF169Q8NCN4 708 aa18.07■□□□□ 0.48
LINC00398-201ENST00000414407 EXOC7Q9UPT5 735 aa18.07■□□□□ 0.48
LINC00398-201ENST00000414407 USP20Q9Y2K6 914 aa18.07■□□□□ 0.48
LINC00398-201ENST00000414407 LCHNA4D1U4 455 aa18.06■□□□□ 0.48
LINC00398-201ENST00000414407 LINC01553A4QN01 128 aa18.06■□□□□ 0.48
LINC00398-201ENST00000414407 ABLIM1O14639 778 aa18.06■□□□□ 0.48
LINC00398-201ENST00000414407 NR1I2O75469 434 aa18.06■□□□□ 0.48
LINC00398-201ENST00000414407 GCNT3O95395 438 aa18.06■□□□□ 0.48
LINC00398-201ENST00000414407 MCF2P10911 925 aa18.06■□□□□ 0.48
LINC00398-201ENST00000414407 FGFR1P11362 822 aa18.06■□□□□ 0.48
LINC00398-201ENST00000414407 ITGA4P13612 1032 aa18.06■□□□□ 0.48
LINC00398-201ENST00000414407 TAP1Q03518 808 aa18.06■□□□□ 0.48
LINC00398-201ENST00000414407 DPYDQ12882 1025 aa18.06■□□□□ 0.48
LINC00398-201ENST00000414407 CLLU1OSQ5K130 101 aa18.06■□□□□ 0.48
LINC00398-201ENST00000414407 FAM26FQ5R3K3 315 aa18.06■□□□□ 0.48
LINC00398-201ENST00000414407 L1TD1Q5T7N2 865 aaKnown RBP18.06■□□□□ 0.48
LINC00398-201ENST00000414407 PPP2R2DQ66LE6 453 aa18.06■□□□□ 0.48
LINC00398-201ENST00000414407 GLB1LQ6UWU2 654 aa18.06■□□□□ 0.48
LINC00398-201ENST00000414407 AGMOQ6ZNB7 445 aa18.06■□□□□ 0.48
LINC00398-201ENST00000414407 CDR2LQ86X02 465 aaPredicted RBP18.06■□□□□ 0.48
LINC00398-201ENST00000414407 CLP1Q92989 425 aaKnown RBP18.06■□□□□ 0.48
LINC00398-201ENST00000414407 SAMD11Q96NU1 681 aa18.06■□□□□ 0.48
LINC00398-201ENST00000414407 CASD1Q96PB1 797 aa18.06■□□□□ 0.48
LINC00398-201ENST00000414407 ACCSQ96QU6 501 aa18.06■□□□□ 0.48
LINC00398-201ENST00000414407 MRPL9Q9BYD2 267 aaKnown RBP18.06■□□□□ 0.48
LINC00398-201ENST00000414407 RSAD1Q9HA92 442 aa18.06■□□□□ 0.48
LINC00398-201ENST00000414407 TBC1D7Q9P0N9 293 aa18.06■□□□□ 0.48
LINC00398-201ENST00000414407 HOOK1Q9UJC3 728 aaKnown RBP18.06■□□□□ 0.48
LINC00398-201ENST00000414407 GIT1Q9Y2X7 761 aa18.06■□□□□ 0.48
LINC00398-201ENST00000414407 RWDD3Q9Y3V2 267 aa18.06■□□□□ 0.48
LINC00398-201ENST00000414407 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.05■□□□□ 0.48
LINC00398-201ENST00000414407 TBKBP1A7MCY6 615 aa18.05■□□□□ 0.48
LINC00398-201ENST00000414407 HNRNPDLO14979 420 aaKnown RBP18.05■□□□□ 0.48
LINC00398-201ENST00000414407 INPPL1O15357 1258 aa18.05■□□□□ 0.48
LINC00398-201ENST00000414407 EIF3DO15371 548 aaKnown RBP eCLIP18.05■□□□□ 0.48
LINC00398-201ENST00000414407 CLDN3O15551 220 aa18.05■□□□□ 0.48
LINC00398-201ENST00000414407 KINO60870 393 aaKnown RBP18.05■□□□□ 0.48
LINC00398-201ENST00000414407 OFD1O75665 1012 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms