RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 HPSEQ9Y251 543 aa5.59□□□□□ -1.52
HERC4-205ENST00000412272 SPATA31D1Q6ZQQ2 1576 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 GRXCR2A6NFK2 248 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 F8W031 263 aaPredicted RBP5.58□□□□□ -1.52
HERC4-205ENST00000412272 MCF2LO15068 1137 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 INMTO95050 263 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 TPBGLP0DKB5 382 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 ZKSCAN1P17029 563 aaPredicted RBP5.58□□□□□ -1.52
HERC4-205ENST00000412272 CALB2P22676 271 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 ADSLP30566 484 aaPredicted RBP5.58□□□□□ -1.52
HERC4-205ENST00000412272 HPDP32754 393 aaPredicted RBP5.58□□□□□ -1.52
HERC4-205ENST00000412272 GUCY1A2P33402 732 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 PSMC2P35998 433 aaKnown RBP5.58□□□□□ -1.52
HERC4-205ENST00000412272 KDSRQ06136 332 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 NFIAQ12857 509 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 SAFB2Q14151 953 aaKnown RBP eCLIP5.58□□□□□ -1.522e-6■■■■□ 19.5
HERC4-205ENST00000412272 PSMD6Q15008 389 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 Q3C1V9 767 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 CCDC58Q4VC31 144 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 USPL1Q5W0Q7 1092 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 CHPFQ8IZ52 775 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 NUP93Q8N1F7 819 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 ELMOD1Q8N336 334 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 FBXL16Q8N461 479 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.58□□□□□ -1.52
HERC4-205ENST00000412272 RRP36Q96EU6 259 aaKnown RBP5.58□□□□□ -1.52
HERC4-205ENST00000412272 PURBQ96QR8 312 aaKnown RBP5.58□□□□□ -1.52
HERC4-205ENST00000412272 TTC1Q99614 292 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 EHD1Q9H4M9 534 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 CTTNBP2NLQ9P2B4 639 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 MTRF1LQ9UGC7 380 aaKnown RBP5.58□□□□□ -1.52
HERC4-205ENST00000412272 SLC12A6Q9UHW9 1150 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 RNF112Q9ULX5 631 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 SFI1A8K8P3 1242 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 E9PMD0 336 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 TLR2O60603 784 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 IDEP14735 1019 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 ATF7P17544 494 aaPredicted RBP5.58□□□□□ -1.52
HERC4-205ENST00000412272 POLR2CP19387 275 aaPredicted RBP5.58□□□□□ -1.52
HERC4-205ENST00000412272 TMOD1P28289 359 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 RPS3AP61247 264 aaKnown RBP5.58□□□□□ -1.52
HERC4-205ENST00000412272 BRDTQ58F21 947 aaPredicted RBP5.58□□□□□ -1.52
HERC4-205ENST00000412272 RAD9BQ6WBX8 426 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 ZNF704Q6ZNC4 412 aaPredicted RBP5.58□□□□□ -1.52
HERC4-205ENST00000412272 PRR23CQ6ZRP0 262 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 DDX42Q86XP3 938 aaKnown RBP eCLIP5.58□□□□□ -1.52
HERC4-205ENST00000412272 SLC35F6Q8N357 371 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 RIBC1Q8N443 379 aaPredicted RBP5.58□□□□□ -1.52
HERC4-205ENST00000412272 ANKRD53Q8N9V6 530 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 PSD4Q8NDX1 1056 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 LILRB4Q8NHJ6 448 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 PLEKHO2Q8TD55 490 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 KCNG4Q8TDN1 519 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 PMEPA1Q969W9 287 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 RNPEPL1Q9HAU8 725 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 ARHGEF3Q9NR81 526 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 MED23Q9ULK4 1368 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 AFF2P51816 1311 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 MROH7Q68CQ1 1323 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 SH3PXD2BA1X283 911 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 ADAMTS4O75173 837 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 ARHGEF15O94989 841 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 EIF2S1P05198 315 aaKnown RBP5.58□□□□□ -1.52
HERC4-205ENST00000412272 RARAP10276 462 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 NR1D1P20393 614 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 M6PRP20645 277 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 CMA1P23946 247 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 CASP14P31944 242 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 ZC3H6P61129 1189 aaKnown RBP5.58□□□□□ -1.52
HERC4-205ENST00000412272 SF3B4Q15427 424 aaKnown RBP eCLIP5.58□□□□□ -1.52
HERC4-205ENST00000412272 ADCK5Q3MIX3 580 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 SLFN13Q68D06 897 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 ANO5Q75V66 913 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 ENDOVQ8N8Q3 282 aaKnown RBP5.58□□□□□ -1.52
HERC4-205ENST00000412272 FSIP1Q8NA03 581 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 HAUS8Q9BT25 410 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 STK33Q9BYT3 514 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 AGXT2Q9BYV1 514 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 GRIP2Q9C0E4 1043 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 GHITMQ9H3K2 345 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 ZNHIT2Q9UHR6 403 aa5.58□□□□□ -1.52
HERC4-205ENST00000412272 RTCBQ9Y3I0 505 aaKnown RBP5.58□□□□□ -1.52
HERC4-205ENST00000412272 WNK3Q9BYP7 1800 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 PNMA6FA0A0J9YX94 578 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 PEX11AO75192 247 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 RETP07949 1114 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 SLC26A3P40879 764 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 MSH2P43246 934 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 RAD23BP54727 409 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 NAA20P61599 178 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 TMPRSS15P98073 1019 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 R3HDM1Q15032 1099 aaKnown RBP5.57□□□□□ -1.52
HERC4-205ENST00000412272 UBE3CQ15386 1083 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 GRIK5Q16478 980 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 TXNRD1Q16881 649 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 ODF2Q5BJF6 829 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 METTL2BQ6P1Q9 378 aaKnown RBP5.57□□□□□ -1.52
HERC4-205ENST00000412272 FAM171BQ6P995 826 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 APTXQ7Z2E3 356 aaKnown RBP5.57□□□□□ -1.52
HERC4-205ENST00000412272 RBBP8NLQ8NC74 664 aaPredicted RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms