RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 PER2O15055 1255 aa14.22□□□□□ -0.13
SNORD88B-201ENST00000408454 LINC01565O15544 149 aa14.22□□□□□ -0.13
SNORD88B-201ENST00000408454 TSPAN1O60635 241 aa14.22□□□□□ -0.13
SNORD88B-201ENST00000408454 JAK2O60674 1132 aa14.22□□□□□ -0.13
SNORD88B-201ENST00000408454 KLRC2P26717 231 aa14.22□□□□□ -0.13
SNORD88B-201ENST00000408454 ARL2P36404 184 aa14.22□□□□□ -0.13
SNORD88B-201ENST00000408454 CCT6AP40227 531 aaKnown RBP14.22□□□□□ -0.13
SNORD88B-201ENST00000408454 FAM187BQ17R55 369 aa14.22□□□□□ -0.13
SNORD88B-201ENST00000408454 DCAF4L1Q3SXM0 396 aa14.22□□□□□ -0.13
SNORD88B-201ENST00000408454 LRRC55Q6ZSA7 311 aa14.22□□□□□ -0.13
SNORD88B-201ENST00000408454 BMP8AQ7Z5Y6 402 aa14.22□□□□□ -0.13
SNORD88B-201ENST00000408454 RNF135Q8IUD6 432 aa14.22□□□□□ -0.13
SNORD88B-201ENST00000408454 SUSD6Q92537 303 aa14.22□□□□□ -0.13
SNORD88B-201ENST00000408454 EDAQ92838 391 aa14.22□□□□□ -0.13
SNORD88B-201ENST00000408454 CDK5RAP3Q96JB5 506 aa14.22□□□□□ -0.13
SNORD88B-201ENST00000408454 ZBP1Q9H171 429 aa14.22□□□□□ -0.13
SNORD88B-201ENST00000408454 NRDE2Q9H7Z3 1164 aa14.22□□□□□ -0.13
SNORD88B-201ENST00000408454 TOPORSQ9NS56 1045 aaPredicted RBP14.22□□□□□ -0.13
SNORD88B-201ENST00000408454 RNF19AQ9NV58 838 aa14.22□□□□□ -0.13
SNORD88B-201ENST00000408454 DNM3Q9UQ16 869 aa14.22□□□□□ -0.13
SNORD88B-201ENST00000408454 RBM19Q9Y4C8 960 aaKnown RBP14.22□□□□□ -0.13
SNORD88B-201ENST00000408454 IPPQ9Y573 584 aa14.22□□□□□ -0.13
SNORD88B-201ENST00000408454 HCFC2Q9Y5Z7 792 aa14.22□□□□□ -0.13
SNORD88B-201ENST00000408454 WDR81Q562E7 1941 aa14.21□□□□□ -0.13
SNORD88B-201ENST00000408454 KIAA1671Q9BY89 1806 aa14.21□□□□□ -0.13
SNORD88B-201ENST00000408454 POTEMA6NI47 508 aa14.21□□□□□ -0.13
SNORD88B-201ENST00000408454 CSDE1O75534 798 aaKnown RBP14.21□□□□□ -0.13
SNORD88B-201ENST00000408454 SOD2P04179 222 aa14.21□□□□□ -0.13
SNORD88B-201ENST00000408454 CYP11B2P19099 503 aa14.21□□□□□ -0.13
SNORD88B-201ENST00000408454 DLX2Q07687 328 aaPredicted RBP14.21□□□□□ -0.13
SNORD88B-201ENST00000408454 PRPF4BQ13523 1007 aaKnown RBP14.21□□□□□ -0.13
SNORD88B-201ENST00000408454 CAPSQ13938 189 aa14.21□□□□□ -0.13
SNORD88B-201ENST00000408454 DTHD1Q6ZMT9 781 aa14.21□□□□□ -0.13
SNORD88B-201ENST00000408454 C15orf39Q6ZRI6 1047 aa14.21□□□□□ -0.13
SNORD88B-201ENST00000408454 CATSPER3Q86XQ3 398 aa14.21□□□□□ -0.13
SNORD88B-201ENST00000408454 TDRD5Q8NAT2 981 aaKnown RBP14.21□□□□□ -0.13
SNORD88B-201ENST00000408454 PIGOQ8TEQ8 1089 aa14.21□□□□□ -0.13
SNORD88B-201ENST00000408454 RPGRIP1Q96KN7 1286 aa14.21□□□□□ -0.13
SNORD88B-201ENST00000408454 GJB4Q9NTQ9 266 aa14.21□□□□□ -0.13
SNORD88B-201ENST00000408454 KCND2Q9NZV8 630 aa14.21□□□□□ -0.13
SNORD88B-201ENST00000408454 SF3B1O75533 1304 aaKnown RBP eCLIP14.2□□□□□ -0.14
SNORD88B-201ENST00000408454 A0A1B0GUA9 196 aa14.2□□□□□ -0.14
SNORD88B-201ENST00000408454 TRAPPC3O43617 180 aa14.2□□□□□ -0.14
SNORD88B-201ENST00000408454 LARGE1O95461 756 aa14.2□□□□□ -0.14
SNORD88B-201ENST00000408454 GLP2RO95838 553 aa14.2□□□□□ -0.14
SNORD88B-201ENST00000408454 PDCP20941 246 aa14.2□□□□□ -0.14
SNORD88B-201ENST00000408454 U2AF2P26368 475 aaKnown RBP eCLIP14.2□□□□□ -0.14
SNORD88B-201ENST00000408454 HOXA11P31270 313 aaPredicted RBP14.2□□□□□ -0.14
SNORD88B-201ENST00000408454 GTF2F1P35269 517 aaKnown RBP eCLIP14.2□□□□□ -0.145e-23■■■■□ 22.8
SNORD88B-201ENST00000408454 OR1G1P47890 313 aa14.2□□□□□ -0.14
SNORD88B-201ENST00000408454 GLUD2P49448 558 aa14.2□□□□□ -0.14
SNORD88B-201ENST00000408454 SMTNP53814 917 aa14.2□□□□□ -0.14
SNORD88B-201ENST00000408454 YARSP54577 528 aaKnown RBP14.2□□□□□ -0.14
SNORD88B-201ENST00000408454 MBTD1Q05BQ5 628 aa14.2□□□□□ -0.14
SNORD88B-201ENST00000408454 DMP1Q13316 513 aaPredicted RBP14.2□□□□□ -0.14
SNORD88B-201ENST00000408454 MTMR3Q13615 1198 aa14.2□□□□□ -0.14
SNORD88B-201ENST00000408454 LLGL2Q6P1M3 1020 aa14.2□□□□□ -0.14
SNORD88B-201ENST00000408454 PADI6Q6TGC4 694 aa14.2□□□□□ -0.14
SNORD88B-201ENST00000408454 AGMOQ6ZNB7 445 aa14.2□□□□□ -0.14
SNORD88B-201ENST00000408454 CCDC149Q6ZUS6 474 aa14.2□□□□□ -0.14
SNORD88B-201ENST00000408454 OTOP3Q7RTS5 596 aa14.2□□□□□ -0.14
SNORD88B-201ENST00000408454 LPPQ93052 612 aa14.2□□□□□ -0.14
SNORD88B-201ENST00000408454 RHOBTB2Q9BYZ6 727 aa14.2□□□□□ -0.14
SNORD88B-201ENST00000408454 PLEKHA4Q9H4M7 779 aa14.2□□□□□ -0.14
SNORD88B-201ENST00000408454 BMP2KQ9NSY1 1161 aaPredicted RBP14.2□□□□□ -0.14
SNORD88B-201ENST00000408454 WRAP73Q9P2S5 460 aaPredicted RBP14.2□□□□□ -0.14
SNORD88B-201ENST00000408454 ARL5CA6NH57 179 aa14.19□□□□□ -0.14
SNORD88B-201ENST00000408454 HIDE1A8MVS5 230 aa14.19□□□□□ -0.14
SNORD88B-201ENST00000408454 CLASP2O75122 1294 aaKnown RBP14.19□□□□□ -0.14
SNORD88B-201ENST00000408454 GLUD1P00367 558 aa14.19□□□□□ -0.14
SNORD88B-201ENST00000408454 ARF4P18085 180 aaPredicted RBP14.19□□□□□ -0.14
SNORD88B-201ENST00000408454 GLRA2P23416 452 aa14.19□□□□□ -0.14
SNORD88B-201ENST00000408454 FOSBP53539 338 aa14.19□□□□□ -0.14
SNORD88B-201ENST00000408454 GUCY1B3Q02153 619 aa14.19□□□□□ -0.14
SNORD88B-201ENST00000408454 SIGLEC14Q08ET2 396 aa14.19□□□□□ -0.14
SNORD88B-201ENST00000408454 KCNC3Q14003 757 aa14.19□□□□□ -0.14
SNORD88B-201ENST00000408454 ZNF174Q15697 407 aa14.19□□□□□ -0.14
SNORD88B-201ENST00000408454 USP41Q3LFD5 358 aa14.19□□□□□ -0.14
SNORD88B-201ENST00000408454 EARS2Q5JPH6 523 aaKnown RBP14.19□□□□□ -0.14
SNORD88B-201ENST00000408454 ARL6IP4Q66PJ3 421 aaKnown RBP14.19□□□□□ -0.14
SNORD88B-201ENST00000408454 CDCA2Q69YH5 1023 aaPredicted RBP14.19□□□□□ -0.14
SNORD88B-201ENST00000408454 MCTP1Q6DN14 999 aa14.19□□□□□ -0.14
SNORD88B-201ENST00000408454 RTL10Q7L3V2 364 aa14.19□□□□□ -0.14
SNORD88B-201ENST00000408454 SNX29Q8TEQ0 813 aa14.19□□□□□ -0.14
SNORD88B-201ENST00000408454 AK8Q96MA6 479 aa14.19□□□□□ -0.14
SNORD88B-201ENST00000408454 UROC1Q96N76 676 aa14.19□□□□□ -0.14
SNORD88B-201ENST00000408454 HERC2P3Q9BVR0 1158 aa14.19□□□□□ -0.14
SNORD88B-201ENST00000408454 XPNPEP1Q9NQW7 623 aa14.19□□□□□ -0.14
SNORD88B-201ENST00000408454 PARP2Q9UGN5 583 aa14.19□□□□□ -0.14
SNORD88B-201ENST00000408454 SORCS3Q9UPU3 1222 aa14.19□□□□□ -0.14
SNORD88B-201ENST00000408454 FAM205CA6NFA0 338 aa14.18□□□□□ -0.14
SNORD88B-201ENST00000408454 NT5C1B-RDH14C9J2C7 533 aa14.18□□□□□ -0.14
SNORD88B-201ENST00000408454 K7ERI5 159 aa14.18□□□□□ -0.14
SNORD88B-201ENST00000408454 ACKR2O00590 384 aa14.18□□□□□ -0.14
SNORD88B-201ENST00000408454 NRP1O14786 923 aa14.18□□□□□ -0.14
SNORD88B-201ENST00000408454 TADA2AO75478 443 aa14.18□□□□□ -0.14
SNORD88B-201ENST00000408454 POMCP01189 267 aa14.18□□□□□ -0.14
SNORD88B-201ENST00000408454 PRKCBP05771 671 aa14.18□□□□□ -0.14
SNORD88B-201ENST00000408454 THP07101 528 aa14.18□□□□□ -0.14
SNORD88B-201ENST00000408454 PBX3P40426 434 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms