RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 POMGNT1Q8WZA1 660 aa22.39■■□□□ 1.17
CHKB-201ENST00000406938 STYXL1Q9Y6J8 313 aa22.39■■□□□ 1.17
CHKB-201ENST00000406938 MROH7Q68CQ1 1323 aa22.38■■□□□ 1.17
CHKB-201ENST00000406938 SLC16A3O15427 465 aaKnown RBP22.38■■□□□ 1.17
CHKB-201ENST00000406938 PQBP1O60828 265 aaKnown RBP22.38■■□□□ 1.17
CHKB-201ENST00000406938 CAND2O75155 1236 aa22.38■■□□□ 1.17
CHKB-201ENST00000406938 TOM1L1O75674 476 aa22.38■■□□□ 1.17
CHKB-201ENST00000406938 AKAP3O75969 853 aa22.38■■□□□ 1.17
CHKB-201ENST00000406938 GARTP22102 1010 aa22.38■■□□□ 1.17
CHKB-201ENST00000406938 SFPQP23246 707 aaKnown RBP eCLIP22.38■■□□□ 1.17
CHKB-201ENST00000406938 EEF1GP26641 437 aaKnown RBP22.38■■□□□ 1.17
CHKB-201ENST00000406938 CASP4P49662 377 aa22.38■■□□□ 1.17
CHKB-201ENST00000406938 SPAG1Q07617 926 aa22.38■■□□□ 1.17
CHKB-201ENST00000406938 TMEM132AQ24JP5 1023 aa22.38■■□□□ 1.17
CHKB-201ENST00000406938 ATF7IP2Q5U623 682 aa22.38■■□□□ 1.17
CHKB-201ENST00000406938 TSHZ1Q6ZSZ6 1077 aa22.38■■□□□ 1.17
CHKB-201ENST00000406938 FILIP1Q7Z7B0 1213 aa22.38■■□□□ 1.17
CHKB-201ENST00000406938 ZBTB45Q96K62 511 aaPredicted RBP22.38■■□□□ 1.17
CHKB-201ENST00000406938 EXOC3O60645 756 aa22.37■■□□□ 1.17
CHKB-201ENST00000406938 CD4P01730 458 aa22.37■■□□□ 1.17
CHKB-201ENST00000406938 FANCCQ00597 558 aa22.37■■□□□ 1.17
CHKB-201ENST00000406938 SLFN12LQ6IEE8 588 aa22.37■■□□□ 1.17
CHKB-201ENST00000406938 SARM1Q6SZW1 724 aa22.37■■□□□ 1.17
CHKB-201ENST00000406938 CATSPER4Q7RTX7 472 aa22.37■■□□□ 1.17
CHKB-201ENST00000406938 XXYLT1Q8NBI6 393 aa22.37■■□□□ 1.17
CHKB-201ENST00000406938 SAAL1Q96ER3 474 aa22.37■■□□□ 1.17
CHKB-201ENST00000406938 PAWRQ96IZ0 340 aaKnown RBP22.37■■□□□ 1.17
CHKB-201ENST00000406938 HAPLN2Q9GZV7 340 aa22.37■■□□□ 1.17
CHKB-201ENST00000406938 C11orf49Q9H6J7 331 aa22.37■■□□□ 1.17
CHKB-201ENST00000406938 ABLIM1O14639 778 aa22.36■■□□□ 1.17
CHKB-201ENST00000406938 GNA14O95837 355 aa22.36■■□□□ 1.17
CHKB-201ENST00000406938 SERPINC1P01008 464 aa22.36■■□□□ 1.17
CHKB-201ENST00000406938 CKBP12277 381 aa22.36■■□□□ 1.17
CHKB-201ENST00000406938 CAPN2P17655 700 aa22.36■■□□□ 1.17
CHKB-201ENST00000406938 ARF4P18085 180 aaPredicted RBP22.36■■□□□ 1.17
CHKB-201ENST00000406938 PROZP22891 400 aa22.36■■□□□ 1.17
CHKB-201ENST00000406938 MATR3P43243 847 aaKnown RBP eCLIP22.36■■□□□ 1.17
CHKB-201ENST00000406938 KRT31Q15323 416 aa22.36■■□□□ 1.17
CHKB-201ENST00000406938 PCBP1Q15365 356 aaKnown RBP eCLIP22.36■■□□□ 1.173e-6■■■■■ 28.8
CHKB-201ENST00000406938 CCDC40Q4G0X9 1142 aa22.36■■□□□ 1.17
CHKB-201ENST00000406938 ANKRD33Q7Z3H0 272 aa22.36■■□□□ 1.17
CHKB-201ENST00000406938 ZSWIM2Q8NEG5 633 aa22.36■■□□□ 1.17
CHKB-201ENST00000406938 ANKRD20A12PQ8NF67 263 aa22.36■■□□□ 1.17
CHKB-201ENST00000406938 CPB2Q96IY4 423 aa22.36■■□□□ 1.17
CHKB-201ENST00000406938 LIMA1Q9UHB6 759 aaKnown RBP22.36■■□□□ 1.17
CHKB-201ENST00000406938 TNFSF13BQ9Y275 285 aa22.36■■□□□ 1.17
CHKB-201ENST00000406938 FRMD4BQ9Y2L6 1034 aa22.36■■□□□ 1.17
CHKB-201ENST00000406938 A0A0B4J269 797 aa22.35■■□□□ 1.17
CHKB-201ENST00000406938 RBAK-RBAKDNI3L0D1 243 aa22.35■■□□□ 1.17
CHKB-201ENST00000406938 CLDN3O15551 220 aa22.35■■□□□ 1.17
CHKB-201ENST00000406938 EPB41P11171 864 aaKnown RBP22.35■■□□□ 1.17
CHKB-201ENST00000406938 PSMC2P35998 433 aaKnown RBP22.35■■□□□ 1.17
CHKB-201ENST00000406938 TRIM60Q495X7 471 aa22.35■■□□□ 1.17
CHKB-201ENST00000406938 ZNF618Q5T7W0 954 aa22.35■■□□□ 1.17
CHKB-201ENST00000406938 C1orf53Q5VUE5 145 aa22.35■■□□□ 1.17
CHKB-201ENST00000406938 MPZL3Q6UWV2 235 aa22.35■■□□□ 1.17
CHKB-201ENST00000406938 APTXQ7Z2E3 356 aaKnown RBP22.35■■□□□ 1.17
CHKB-201ENST00000406938 CDR2LQ86X02 465 aaPredicted RBP22.35■■□□□ 1.17
CHKB-201ENST00000406938 MKNK1Q9BUB5 465 aa22.35■■□□□ 1.17
CHKB-201ENST00000406938 MSTO1Q9BUK6 570 aa22.35■■□□□ 1.17
CHKB-201ENST00000406938 PDZD7Q9H5P4 517 aa22.35■■□□□ 1.17
CHKB-201ENST00000406938 PTPRHQ9HD43 1115 aa22.35■■□□□ 1.17
CHKB-201ENST00000406938 GOLGA8IPA6NC78 632 aa22.35■■□□□ 1.17
CHKB-201ENST00000406938 GOLGA8JA6NMD2 632 aa22.35■■□□□ 1.17
CHKB-201ENST00000406938 TLR3O15455 904 aaKnown RBP22.35■■□□□ 1.17
CHKB-201ENST00000406938 HARSP12081 509 aaKnown RBP22.35■■□□□ 1.17
CHKB-201ENST00000406938 MTIF2P46199 727 aaKnown RBP22.35■■□□□ 1.17
CHKB-201ENST00000406938 MARSP56192 900 aaKnown RBP22.35■■□□□ 1.17
CHKB-201ENST00000406938 MCL1Q07820 350 aa22.35■■□□□ 1.17
CHKB-201ENST00000406938 RBL2Q08999 1139 aa22.35■■□□□ 1.17
CHKB-201ENST00000406938 NOLC1Q14978 699 aaKnown RBP eCLIP22.35■■□□□ 1.17
CHKB-201ENST00000406938 ZNF568Q3ZCX4 644 aa22.35■■□□□ 1.17
CHKB-201ENST00000406938 FAM26DQ5JW98 314 aa22.35■■□□□ 1.17
CHKB-201ENST00000406938 EEF1DP3Q658K8 133 aa22.35■■□□□ 1.17
CHKB-201ENST00000406938 ZBTB33Q86T24 672 aa22.35■■□□□ 1.17
CHKB-201ENST00000406938 FAM228AQ86W67 206 aa22.35■■□□□ 1.17
CHKB-201ENST00000406938 FAM186BQ8IYM0 893 aa22.35■■□□□ 1.17
CHKB-201ENST00000406938 CAGE1Q8TC20 777 aa22.35■■□□□ 1.17
CHKB-201ENST00000406938 TCHPQ9BT92 498 aa22.35■■□□□ 1.17
CHKB-201ENST00000406938 TAB2Q9NYJ8 693 aa22.35■■□□□ 1.17
CHKB-201ENST00000406938 AGO2Q9UKV8 859 aaKnown RBP22.35■■□□□ 1.17
CHKB-201ENST00000406938 NOC2LQ9Y3T9 749 aaKnown RBP22.35■■□□□ 1.17
CHKB-201ENST00000406938 KIAA0100Q14667 2235 aaKnown RBP22.34■■□□□ 1.17
CHKB-201ENST00000406938 CCDC155Q8N6L0 562 aa22.34■■□□□ 1.17
CHKB-201ENST00000406938 RDH13Q8NBN7 331 aa22.34■■□□□ 1.17
CHKB-201ENST00000406938 TUBGCP2Q9BSJ2 902 aa22.34■■□□□ 1.17
CHKB-201ENST00000406938 TRIM5Q9C035 493 aa22.34■■□□□ 1.17
CHKB-201ENST00000406938 AGPAT5Q9NUQ2 364 aa22.34■■□□□ 1.17
CHKB-201ENST00000406938 IFNKQ9P0W0 207 aa22.34■■□□□ 1.17
CHKB-201ENST00000406938 KIAA0391O15091 583 aaKnown RBP22.33■■□□□ 1.17
CHKB-201ENST00000406938 HOXA11P31270 313 aaPredicted RBP22.33■■□□□ 1.17
CHKB-201ENST00000406938 NCBP1Q09161 790 aaKnown RBP22.33■■□□□ 1.17
CHKB-201ENST00000406938 SNRNP35Q16560 246 aaKnown RBP22.33■■□□□ 1.17
CHKB-201ENST00000406938 TRAF7Q6Q0C0 670 aa22.33■■□□□ 1.17
CHKB-201ENST00000406938 NECAB2Q7Z6G3 386 aa22.33■■□□□ 1.17
CHKB-201ENST00000406938 FRMD5Q7Z6J6 570 aa22.33■■□□□ 1.17
CHKB-201ENST00000406938 CBWD2Q8IUF1 395 aa22.33■■□□□ 1.17
CHKB-201ENST00000406938 GPD1LQ8N335 351 aa22.33■■□□□ 1.17
CHKB-201ENST00000406938 FBXL18Q96ME1 805 aa22.33■■□□□ 1.17
CHKB-201ENST00000406938 FAM213AQ9BRX8 229 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms