RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 CNTNAP1P78357 1384 aa15.2■□□□□ 0.02
ATG3-202ENST00000402314 F8VZ95 297 aa15.2■□□□□ 0.02
ATG3-202ENST00000402314 EXOC3O60645 756 aa15.2■□□□□ 0.02
ATG3-202ENST00000402314 UBOX5O94941 541 aa15.2■□□□□ 0.02
ATG3-202ENST00000402314 H2AFZP0C0S5 128 aa15.2■□□□□ 0.02
ATG3-202ENST00000402314 FKBP1AP62942 108 aaKnown RBP15.2■□□□□ 0.02
ATG3-202ENST00000402314 H2AFVQ71UI9 128 aa15.2■□□□□ 0.02
ATG3-202ENST00000402314 GPRC5CQ9NQ84 441 aa15.2■□□□□ 0.02
ATG3-202ENST00000402314 PGRMC1O00264 195 aaKnown RBP15.19■□□□□ 0.02
ATG3-202ENST00000402314 PPP1R12AO14974 1030 aaPredicted RBP15.19■□□□□ 0.02
ATG3-202ENST00000402314 RTN2O75298 545 aa15.19■□□□□ 0.02
ATG3-202ENST00000402314 NPM3O75607 178 aaKnown RBP15.19■□□□□ 0.02
ATG3-202ENST00000402314 FLOT1O75955 427 aa15.19■□□□□ 0.02
ATG3-202ENST00000402314 PPP2R5CQ13362 524 aa15.19■□□□□ 0.02
ATG3-202ENST00000402314 DRP2Q13474 957 aa15.19■□□□□ 0.02
ATG3-202ENST00000402314 ARHGAP27Q6ZUM4 889 aa15.19■□□□□ 0.02
ATG3-202ENST00000402314 ARHGEF26Q96DR7 871 aa15.19■□□□□ 0.02
ATG3-202ENST00000402314 ARHGEF35A5YM69 484 aa15.19■□□□□ 0.02
ATG3-202ENST00000402314 HOXA7P31268 230 aaPredicted RBP15.19■□□□□ 0.02
ATG3-202ENST00000402314 ZNF746Q6NUN9 644 aaPredicted RBP15.19■□□□□ 0.02
ATG3-202ENST00000402314 RSBN1LQ6PCB5 846 aaPredicted RBP15.19■□□□□ 0.02
ATG3-202ENST00000402314 HS2ST1Q7LGA3 356 aa15.19■□□□□ 0.02
ATG3-202ENST00000402314 FMNL3Q8IVF7 1028 aa15.19■□□□□ 0.02
ATG3-202ENST00000402314 KAT5Q92993 513 aa15.19■□□□□ 0.02
ATG3-202ENST00000402314 RANBP17Q9H2T7 1088 aaKnown RBP15.19■□□□□ 0.02
ATG3-202ENST00000402314 TUFT1Q9NNX1 390 aa15.19■□□□□ 0.02
ATG3-202ENST00000402314 DNAJC17Q9NVM6 304 aaKnown RBP15.19■□□□□ 0.02
ATG3-202ENST00000402314 HERC5Q9UII4 1024 aaKnown RBP15.19■□□□□ 0.02
ATG3-202ENST00000402314 VIL1P09327 827 aaKnown RBP15.19■□□□□ 0.02
ATG3-202ENST00000402314 STAT1P42224 750 aa15.19■□□□□ 0.02
ATG3-202ENST00000402314 MAPK7Q13164 816 aa15.19■□□□□ 0.02
ATG3-202ENST00000402314 BIRC3Q13489 604 aa15.19■□□□□ 0.02
ATG3-202ENST00000402314 PHLDB3Q6NSJ2 640 aa15.19■□□□□ 0.02
ATG3-202ENST00000402314 CCDC50Q8IVM0 306 aa15.19■□□□□ 0.02
ATG3-202ENST00000402314 OGFOD1Q8N543 542 aa15.19■□□□□ 0.02
ATG3-202ENST00000402314 ANKS4BQ8N8V4 417 aa15.19■□□□□ 0.02
ATG3-202ENST00000402314 EPS8L3Q8TE67 593 aaKnown RBP15.19■□□□□ 0.02
ATG3-202ENST00000402314 PARD3BQ8TEW8 1205 aa15.19■□□□□ 0.02
ATG3-202ENST00000402314 SLC20A1Q8WUM9 679 aa15.19■□□□□ 0.02
ATG3-202ENST00000402314 CBWD1Q9BRT8 395 aa15.19■□□□□ 0.02
ATG3-202ENST00000402314 ZNF341Q9BYN7 854 aa15.19■□□□□ 0.02
ATG3-202ENST00000402314 KCNH7Q9NS40 1196 aa15.19■□□□□ 0.02
ATG3-202ENST00000402314 RNF14Q9UBS8 474 aa15.19■□□□□ 0.02
ATG3-202ENST00000402314 PNMA3Q9UL41 463 aa15.19■□□□□ 0.02
ATG3-202ENST00000402314 CCPG1Q9ULG6 757 aa15.19■□□□□ 0.02
ATG3-202ENST00000402314 GOLGA8IPA6NC78 632 aa15.18■□□□□ 0.02
ATG3-202ENST00000402314 GOLGA8JA6NMD2 632 aa15.18■□□□□ 0.02
ATG3-202ENST00000402314 K7ENM7 598 aa15.18■□□□□ 0.02
ATG3-202ENST00000402314 SLC16A3O15427 465 aaKnown RBP15.18■□□□□ 0.02
ATG3-202ENST00000402314 KRT13P13646 458 aa15.18■□□□□ 0.02
ATG3-202ENST00000402314 GAP43P17677 238 aa15.18■□□□□ 0.02
ATG3-202ENST00000402314 FGFR4P22455 802 aa15.18■□□□□ 0.02
ATG3-202ENST00000402314 PRKCIP41743 596 aa15.18■□□□□ 0.02
ATG3-202ENST00000402314 PADI6Q6TGC4 694 aa15.18■□□□□ 0.02
ATG3-202ENST00000402314 BZW1Q7L1Q6 419 aaKnown RBP15.18■□□□□ 0.02
ATG3-202ENST00000402314 ERICH1Q86X53 443 aa15.18■□□□□ 0.02
ATG3-202ENST00000402314 ANKRD42Q8N9B4 389 aa15.18■□□□□ 0.02
ATG3-202ENST00000402314 FAM151AQ8WW52 585 aa15.18■□□□□ 0.02
ATG3-202ENST00000402314 DYDC1Q8WWB3 177 aa15.18■□□□□ 0.02
ATG3-202ENST00000402314 ZNF570Q96NI8 536 aa15.18■□□□□ 0.02
ATG3-202ENST00000402314 NACC1Q96RE7 527 aa15.18■□□□□ 0.02
ATG3-202ENST00000402314 GPR88Q9GZN0 384 aa15.18■□□□□ 0.02
ATG3-202ENST00000402314 INTS2Q9H0H0 1204 aaKnown RBP15.18■□□□□ 0.02
ATG3-202ENST00000402314 INTS9Q9NV88 658 aaKnown RBP15.18■□□□□ 0.02
ATG3-202ENST00000402314 PPP1R9AQ9ULJ8 1098 aa15.18■□□□□ 0.02
ATG3-202ENST00000402314 FOXN3O00409 490 aaPredicted RBP15.18■□□□□ 0.02
ATG3-202ENST00000402314 IGF2BP3O00425 579 aaKnown RBP eCLIP15.18■□□□□ 0.02
ATG3-202ENST00000402314 SORBS3O60504 671 aa15.18■□□□□ 0.02
ATG3-202ENST00000402314 ALAS1P13196 640 aa15.18■□□□□ 0.02
ATG3-202ENST00000402314 CREB1P16220 341 aa15.18■□□□□ 0.02
ATG3-202ENST00000402314 SOX5P35711 763 aa15.18■□□□□ 0.02
ATG3-202ENST00000402314 GCLMP48507 274 aa15.18■□□□□ 0.02
ATG3-202ENST00000402314 ALDH5A1P51649 535 aaPredicted RBP15.18■□□□□ 0.02
ATG3-202ENST00000402314 RNASELQ05823 741 aaKnown RBP15.18■□□□□ 0.02
ATG3-202ENST00000402314 SPP2Q13103 211 aa15.18■□□□□ 0.02
ATG3-202ENST00000402314 CUL1Q13616 776 aa15.18■□□□□ 0.02
ATG3-202ENST00000402314 EMC10Q5UCC4 262 aa15.18■□□□□ 0.02
ATG3-202ENST00000402314 LRIG3Q6UXM1 1119 aa15.18■□□□□ 0.02
ATG3-202ENST00000402314 GDAP1Q8TB36 358 aa15.18■□□□□ 0.02
ATG3-202ENST00000402314 SCFD2Q8WU76 684 aa15.18■□□□□ 0.02
ATG3-202ENST00000402314 CHURC1Q8WUH1 139 aa15.18■□□□□ 0.02
ATG3-202ENST00000402314 FMO2Q99518 471 aa15.18■□□□□ 0.02
ATG3-202ENST00000402314 SAMD15Q9P1V8 674 aa15.18■□□□□ 0.02
ATG3-202ENST00000402314 UTP11Q9Y3A2 253 aaKnown RBP15.18■□□□□ 0.02
ATG3-202ENST00000402314 MRPL11Q9Y3B7 192 aaKnown RBP15.18■□□□□ 0.02
ATG3-202ENST00000402314 EGFRP00533 1210 aa15.17■□□□□ 0.02
ATG3-202ENST00000402314 EIF2AK2P19525 551 aaKnown RBP15.17■□□□□ 0.02
ATG3-202ENST00000402314 EN1Q05925 392 aaPredicted RBP15.17■□□□□ 0.02
ATG3-202ENST00000402314 SLC29A2Q14542 456 aa15.17■□□□□ 0.02
ATG3-202ENST00000402314 ERMARDQ5T6L9 678 aa15.17■□□□□ 0.02
ATG3-202ENST00000402314 THEMIS2Q5TEJ8 643 aa15.17■□□□□ 0.02
ATG3-202ENST00000402314 FLAD1Q8NFF5 587 aa15.17■□□□□ 0.02
ATG3-202ENST00000402314 SLC35G2Q8TBE7 412 aa15.17■□□□□ 0.02
ATG3-202ENST00000402314 KIFC3Q9BVG8 833 aa15.17■□□□□ 0.02
ATG3-202ENST00000402314 TEKT3Q9BXF9 490 aa15.17■□□□□ 0.02
ATG3-202ENST00000402314 RAVER2Q9HCJ3 691 aaKnown RBP15.17■□□□□ 0.02
ATG3-202ENST00000402314 TMOD4Q9NZQ9 345 aa15.17■□□□□ 0.02
ATG3-202ENST00000402314 FRMD4BQ9Y2L6 1034 aa15.17■□□□□ 0.02
ATG3-202ENST00000402314 FRMPD4Q14CM0 1322 aa15.17■□□□□ 0.02
ATG3-202ENST00000402314 TMEM110-MUSTN1A8MSY1 372 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms