RNA–Protein interactions for RNA: ENST00000398372.2

SMARCE1P6-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 6, humanhuman

BASIC

Gene SMARCE1P6, Length 1,216 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P6-201ENST00000398372 ADAMTS3O15072 1205 aa7.11□□□□□ -1.27
SMARCE1P6-201ENST00000398372 LGR5O75473 907 aa7.11□□□□□ -1.27
SMARCE1P6-201ENST00000398372 AP1G2O75843 785 aa7.11□□□□□ -1.27
SMARCE1P6-201ENST00000398372 SMC2O95347 1197 aa7.11□□□□□ -1.27
SMARCE1P6-201ENST00000398372 PARNO95453 639 aaKnown RBP7.11□□□□□ -1.27
SMARCE1P6-201ENST00000398372 CXCL10P02778 98 aa7.11□□□□□ -1.27
SMARCE1P6-201ENST00000398372 MARK3P27448 753 aa7.11□□□□□ -1.27
SMARCE1P6-201ENST00000398372 ERCC5P28715 1186 aaPredicted RBP7.11□□□□□ -1.27
SMARCE1P6-201ENST00000398372 MARCKSP29966 332 aaPredicted RBP7.11□□□□□ -1.27
SMARCE1P6-201ENST00000398372 HOXC8P31273 242 aa7.11□□□□□ -1.27
SMARCE1P6-201ENST00000398372 THPOP40225 353 aa7.11□□□□□ -1.27
SMARCE1P6-201ENST00000398372 SARSP49591 514 aaKnown RBP7.11□□□□□ -1.27
SMARCE1P6-201ENST00000398372 TOB1P50616 345 aaPredicted RBP7.11□□□□□ -1.27
SMARCE1P6-201ENST00000398372 HTRA4P83105 476 aaPredicted RBP7.11□□□□□ -1.27
SMARCE1P6-201ENST00000398372 ARHGAP4P98171 946 aa7.11□□□□□ -1.27
SMARCE1P6-201ENST00000398372 AP3B2Q13367 1082 aa7.11□□□□□ -1.27
SMARCE1P6-201ENST00000398372 MBTPS1Q14703 1052 aa7.11□□□□□ -1.27
SMARCE1P6-201ENST00000398372 PTPROQ16827 1216 aa7.11□□□□□ -1.27
SMARCE1P6-201ENST00000398372 DPCR1Q3MIW9 517 aa7.11□□□□□ -1.27
SMARCE1P6-201ENST00000398372 TIGD5Q53EQ6 642 aa7.11□□□□□ -1.27
SMARCE1P6-201ENST00000398372 CNKSR3Q6P9H4 555 aa7.11□□□□□ -1.27
SMARCE1P6-201ENST00000398372 PADI6Q6TGC4 694 aa7.11□□□□□ -1.27
SMARCE1P6-201ENST00000398372 SERINC5Q86VE9 423 aa7.11□□□□□ -1.27
SMARCE1P6-201ENST00000398372 LRRC8AQ8IWT6 810 aa7.11□□□□□ -1.27
SMARCE1P6-201ENST00000398372 SPC24Q8NBT2 197 aa7.11□□□□□ -1.27
SMARCE1P6-201ENST00000398372 ANKRD20A12PQ8NF67 263 aa7.11□□□□□ -1.27
SMARCE1P6-201ENST00000398372 ERCC4Q92889 916 aaPredicted RBP7.11□□□□□ -1.27
SMARCE1P6-201ENST00000398372 MSLNLQ96KJ4 702 aa7.11□□□□□ -1.27
SMARCE1P6-201ENST00000398372 HS3ST6Q96QI5 342 aa7.11□□□□□ -1.27
SMARCE1P6-201ENST00000398372 OSBPL7Q9BZF2 842 aa7.11□□□□□ -1.27
SMARCE1P6-201ENST00000398372 GLT8D2Q9H1C3 349 aa7.11□□□□□ -1.27
SMARCE1P6-201ENST00000398372 IGFLR1Q9H665 355 aa7.11□□□□□ -1.27
SMARCE1P6-201ENST00000398372 KCNH7Q9NS40 1196 aa7.11□□□□□ -1.27
SMARCE1P6-201ENST00000398372 GJB4Q9NTQ9 266 aa7.11□□□□□ -1.27
SMARCE1P6-201ENST00000398372 SETD4Q9NVD3 440 aa7.11□□□□□ -1.27
SMARCE1P6-201ENST00000398372 ZNF215Q9UL58 517 aaPredicted RBP7.11□□□□□ -1.27
SMARCE1P6-201ENST00000398372 PCDHGA10Q9Y5H3 936 aa7.11□□□□□ -1.27
SMARCE1P6-201ENST00000398372 DNAH14Q0VDD8 3507 aa7.1□□□□□ -1.27
SMARCE1P6-201ENST00000398372 ABHD14A-ACY1A0A1B0GW23 586 aa7.1□□□□□ -1.27
SMARCE1P6-201ENST00000398372 ESYT2A0FGR8 921 aa7.1□□□□□ -1.27
SMARCE1P6-201ENST00000398372 RSPH10B2B2RC85 870 aa7.1□□□□□ -1.27
SMARCE1P6-201ENST00000398372 H0YHG0 523 aa7.1□□□□□ -1.27
SMARCE1P6-201ENST00000398372 MEIS1O00470 390 aa7.1□□□□□ -1.27
SMARCE1P6-201ENST00000398372 GRM6O15303 877 aa7.1□□□□□ -1.27
SMARCE1P6-201ENST00000398372 CSPG5O95196 566 aa7.1□□□□□ -1.27
SMARCE1P6-201ENST00000398372 MYL1P05976 194 aa7.1□□□□□ -1.27
SMARCE1P6-201ENST00000398372 CTSHP09668 335 aa7.1□□□□□ -1.27
SMARCE1P6-201ENST00000398372 RSPH10BP0C881 870 aa7.1□□□□□ -1.27
SMARCE1P6-201ENST00000398372 GNAT1P11488 350 aa7.1□□□□□ -1.27
SMARCE1P6-201ENST00000398372 ZNF76P36508 570 aa7.1□□□□□ -1.27
SMARCE1P6-201ENST00000398372 SREBF1P36956 1147 aa7.1□□□□□ -1.27
SMARCE1P6-201ENST00000398372 USP46P62068 366 aa7.1□□□□□ -1.27
SMARCE1P6-201ENST00000398372 ADAM17P78536 824 aa7.1□□□□□ -1.27
SMARCE1P6-201ENST00000398372 ATP2C1P98194 919 aaPredicted RBP7.1□□□□□ -1.27
SMARCE1P6-201ENST00000398372 SIGLEC14Q08ET2 396 aa7.1□□□□□ -1.27
SMARCE1P6-201ENST00000398372 NCBP1Q09161 790 aaKnown RBP7.1□□□□□ -1.27
SMARCE1P6-201ENST00000398372 ADAM15Q13444 863 aa7.1□□□□□ -1.27
SMARCE1P6-201ENST00000398372 SMAD4Q13485 552 aaKnown RBP7.1□□□□□ -1.27
SMARCE1P6-201ENST00000398372 CBX2Q14781 532 aaPredicted RBP7.1□□□□□ -1.27
SMARCE1P6-201ENST00000398372 NCAPHQ15003 741 aa7.1□□□□□ -1.27
SMARCE1P6-201ENST00000398372 POSTNQ15063 836 aa7.1□□□□□ -1.27
SMARCE1P6-201ENST00000398372 CEP55Q53EZ4 464 aa7.1□□□□□ -1.27
SMARCE1P6-201ENST00000398372 TSHZ1Q6ZSZ6 1077 aa7.1□□□□□ -1.27
SMARCE1P6-201ENST00000398372 DGLUCYQ7Z3D6 616 aa7.1□□□□□ -1.27
SMARCE1P6-201ENST00000398372 TMEM192Q8IY95 271 aa7.1□□□□□ -1.27
SMARCE1P6-201ENST00000398372 TMEM105Q8N8V8 129 aa7.1□□□□□ -1.27
SMARCE1P6-201ENST00000398372 ENOX1Q8TC92 643 aaKnown RBP7.1□□□□□ -1.27
SMARCE1P6-201ENST00000398372 CCDC12Q8WUD4 166 aaPredicted RBP7.1□□□□□ -1.27
SMARCE1P6-201ENST00000398372 LMBR1Q8WVP7 490 aa7.1□□□□□ -1.27
SMARCE1P6-201ENST00000398372 GLG1Q92896 1179 aa7.1□□□□□ -1.27
SMARCE1P6-201ENST00000398372 GSDMAQ96QA5 445 aa7.1□□□□□ -1.27
SMARCE1P6-201ENST00000398372 PCYT2Q99447 389 aa7.1□□□□□ -1.27
SMARCE1P6-201ENST00000398372 ZMYND12Q9H0C1 365 aa7.1□□□□□ -1.27
SMARCE1P6-201ENST00000398372 IRF2BPLQ9H1B7 796 aa7.1□□□□□ -1.27
SMARCE1P6-201ENST00000398372 NUCKS1Q9H1E3 243 aaKnown RBP7.1□□□□□ -1.27
SMARCE1P6-201ENST00000398372 SMARCAD1Q9H4L7 1026 aa7.1□□□□□ -1.27
SMARCE1P6-201ENST00000398372 AGO4Q9HCK5 861 aaKnown RBP7.1□□□□□ -1.27
SMARCE1P6-201ENST00000398372 C6orf50Q9HD87 102 aa7.1□□□□□ -1.27
SMARCE1P6-201ENST00000398372 JPH1Q9HDC5 661 aaPredicted RBP7.1□□□□□ -1.27
SMARCE1P6-201ENST00000398372 CLEC1BQ9P126 229 aa7.1□□□□□ -1.27
SMARCE1P6-201ENST00000398372 SLC9A2Q9UBY0 812 aa7.1□□□□□ -1.27
SMARCE1P6-201ENST00000398372 CD207Q9UJ71 328 aa7.1□□□□□ -1.27
SMARCE1P6-201ENST00000398372 PYCARDQ9ULZ3 195 aa7.1□□□□□ -1.27
SMARCE1P6-201ENST00000398372 INSL6Q9Y581 213 aa7.1□□□□□ -1.27
SMARCE1P6-201ENST00000398372 NFASCO94856 1347 aa7.09□□□□□ -1.27
SMARCE1P6-201ENST00000398372 NRCAMQ92823 1304 aa7.09□□□□□ -1.27
SMARCE1P6-201ENST00000398372 TMCO5BA8MYB1 307 aa7.09□□□□□ -1.27
SMARCE1P6-201ENST00000398372 DDX39AO00148 427 aaKnown RBP7.09□□□□□ -1.27
SMARCE1P6-201ENST00000398372 ACTN4O43707 911 aaKnown RBP7.09□□□□□ -1.27
SMARCE1P6-201ENST00000398372 COQ9O75208 318 aa7.09□□□□□ -1.27
SMARCE1P6-201ENST00000398372 RPS6KA5O75582 802 aa7.09□□□□□ -1.27
SMARCE1P6-201ENST00000398372 LINC00271P0C7V0 271 aa7.09□□□□□ -1.27
SMARCE1P6-201ENST00000398372 SETSIPP0DME0 302 aa7.09□□□□□ -1.27
SMARCE1P6-201ENST00000398372 GNA11P29992 359 aa7.09□□□□□ -1.27
SMARCE1P6-201ENST00000398372 LONP1P36776 959 aaKnown RBP7.09□□□□□ -1.27
SMARCE1P6-201ENST00000398372 PRPHP41219 470 aa7.09□□□□□ -1.27
SMARCE1P6-201ENST00000398372 ACTR2P61160 394 aa7.09□□□□□ -1.27
SMARCE1P6-201ENST00000398372 PPFIA1Q13136 1202 aa7.09□□□□□ -1.27
SMARCE1P6-201ENST00000398372 ITGB3BPQ13352 177 aaPredicted RBP7.09□□□□□ -1.27
SMARCE1P6-201ENST00000398372 COL9A2Q14055 689 aaPredicted RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms