RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 MRPL4Q9BYD3 311 aaKnown RBP27.87■■■□□ 2.05
TMEM55B-202ENST00000398020 OLFML3Q9NRN5 406 aa27.87■■■□□ 2.05
TMEM55B-202ENST00000398020 LCHNA4D1U4 455 aa27.87■■■□□ 2.05
TMEM55B-202ENST00000398020 MEIS3P2A8K0S8 358 aa27.87■■■□□ 2.05
TMEM55B-202ENST00000398020 GCNT3O95395 438 aa27.87■■■□□ 2.05
TMEM55B-202ENST00000398020 MYBP10242 640 aa27.87■■■□□ 2.05
TMEM55B-202ENST00000398020 DNAJB2P25686 324 aa27.87■■■□□ 2.05
TMEM55B-202ENST00000398020 GLIS3Q8NEA6 775 aa27.87■■■□□ 2.05
TMEM55B-202ENST00000398020 CCDC51Q96ER9 411 aa27.87■■■□□ 2.05
TMEM55B-202ENST00000398020 RAD9AQ99638 391 aa27.87■■■□□ 2.05
TMEM55B-202ENST00000398020 ACO2Q99798 780 aaKnown RBP27.87■■■□□ 2.05
TMEM55B-202ENST00000398020 TRIM6Q9C030 488 aaPredicted RBP27.87■■■□□ 2.05
TMEM55B-202ENST00000398020 HES2Q9Y543 173 aa27.87■■■□□ 2.05
TMEM55B-202ENST00000398020 GTF2BQ00403 316 aa27.86■■■□□ 2.05
TMEM55B-202ENST00000398020 ZNF598Q86UK7 904 aaKnown RBP27.86■■■□□ 2.05
TMEM55B-202ENST00000398020 MSRAQ9UJ68 235 aa27.86■■■□□ 2.05
TMEM55B-202ENST00000398020 PCDHA11Q9Y5I1 949 aa27.86■■■□□ 2.05
TMEM55B-202ENST00000398020 CDH23Q9H251 3354 aa27.86■■■□□ 2.05
TMEM55B-202ENST00000398020 N4BP3O15049 544 aa27.85■■■□□ 2.05
TMEM55B-202ENST00000398020 KLRC4O43908 158 aa27.85■■■□□ 2.05
TMEM55B-202ENST00000398020 DGKIO75912 1065 aa27.85■■■□□ 2.05
TMEM55B-202ENST00000398020 CA3P07451 260 aa27.85■■■□□ 2.05
TMEM55B-202ENST00000398020 RAB27AP51159 221 aa27.85■■■□□ 2.05
TMEM55B-202ENST00000398020 HTRA4P83105 476 aaPredicted RBP27.85■■■□□ 2.05
TMEM55B-202ENST00000398020 SMG8Q8ND04 991 aaKnown RBP27.85■■■□□ 2.05
TMEM55B-202ENST00000398020 BICD1Q96G01 975 aa27.85■■■□□ 2.05
TMEM55B-202ENST00000398020 IKZF4Q9H2S9 585 aa27.85■■■□□ 2.05
TMEM55B-202ENST00000398020 NKX2-4Q9H2Z4 354 aa27.85■■■□□ 2.05
TMEM55B-202ENST00000398020 ELAC1Q9H777 363 aaKnown RBP27.85■■■□□ 2.05
TMEM55B-202ENST00000398020 IPPQ9Y573 584 aa27.85■■■□□ 2.05
TMEM55B-202ENST00000398020 INSL6Q9Y581 213 aa27.85■■■□□ 2.05
TMEM55B-202ENST00000398020 CHD7Q9P2D1 2997 aa27.85■■■□□ 2.05
TMEM55B-202ENST00000398020 KCNA1Q09470 495 aa27.84■■■□□ 2.05
TMEM55B-202ENST00000398020 PNOCQ13519 176 aa27.84■■■□□ 2.05
TMEM55B-202ENST00000398020 POSTNQ15063 836 aa27.84■■■□□ 2.05
TMEM55B-202ENST00000398020 SLC17A8Q8NDX2 589 aa27.84■■■□□ 2.05
TMEM55B-202ENST00000398020 APOL6Q9BWW8 343 aa27.84■■■□□ 2.05
TMEM55B-202ENST00000398020 NXF3Q9H4D5 531 aaKnown RBP27.84■■■□□ 2.05
TMEM55B-202ENST00000398020 ST6GALNAC4Q9H4F1 302 aa27.84■■■□□ 2.05
TMEM55B-202ENST00000398020 TNFSF13BQ9Y275 285 aa27.84■■■□□ 2.05
TMEM55B-202ENST00000398020 PVALEFA0A1B0GWK0 134 aa27.84■■■□□ 2.05
TMEM55B-202ENST00000398020 KINO60870 393 aaKnown RBP27.84■■■□□ 2.05
TMEM55B-202ENST00000398020 ARHGEF15O94989 841 aa27.84■■■□□ 2.05
TMEM55B-202ENST00000398020 SKIP12755 728 aa27.84■■■□□ 2.05
TMEM55B-202ENST00000398020 DPYDQ12882 1025 aa27.84■■■□□ 2.05
TMEM55B-202ENST00000398020 RAB30Q15771 203 aa27.84■■■□□ 2.05
TMEM55B-202ENST00000398020 PAN2Q504Q3 1202 aaKnown RBP27.84■■■□□ 2.05
TMEM55B-202ENST00000398020 KANK3Q6NY19 840 aa27.84■■■□□ 2.05
TMEM55B-202ENST00000398020 ERCC4Q92889 916 aaPredicted RBP27.84■■■□□ 2.05
TMEM55B-202ENST00000398020 ZBTB45Q96K62 511 aaPredicted RBP27.84■■■□□ 2.05
TMEM55B-202ENST00000398020 ANKFY1Q9P2R3 1169 aa27.84■■■□□ 2.05
TMEM55B-202ENST00000398020 COL4A6Q14031 1691 aa27.84■■■□□ 2.05
TMEM55B-202ENST00000398020 ZNF623O75123 536 aa27.83■■■□□ 2.05
TMEM55B-202ENST00000398020 PPP1R37O75864 691 aa27.83■■■□□ 2.05
TMEM55B-202ENST00000398020 EOMESO95936 686 aa27.83■■■□□ 2.05
TMEM55B-202ENST00000398020 MYL1P05976 194 aa27.83■■■□□ 2.05
TMEM55B-202ENST00000398020 EHHADHQ08426 723 aa27.83■■■□□ 2.05
TMEM55B-202ENST00000398020 KMT5BQ4FZB7 885 aa27.83■■■□□ 2.05
TMEM55B-202ENST00000398020 FAM26FQ5R3K3 315 aa27.83■■■□□ 2.05
TMEM55B-202ENST00000398020 ZBTB33Q86T24 672 aa27.83■■■□□ 2.05
TMEM55B-202ENST00000398020 MAP4K3Q8IVH8 894 aa27.83■■■□□ 2.05
TMEM55B-202ENST00000398020 KCNN1Q92952 543 aa27.83■■■□□ 2.05
TMEM55B-202ENST00000398020 CCDC34Q96HJ3 373 aa27.83■■■□□ 2.05
TMEM55B-202ENST00000398020 ADPGKQ9BRR6 497 aa27.83■■■□□ 2.05
TMEM55B-202ENST00000398020 TCHPQ9BT92 498 aa27.83■■■□□ 2.05
TMEM55B-202ENST00000398020 STRA6Q9BX79 667 aa27.83■■■□□ 2.05
TMEM55B-202ENST00000398020 RNF39Q9H2S5 420 aa27.83■■■□□ 2.05
TMEM55B-202ENST00000398020 RC3H2Q9HBD1 1191 aaKnown RBP27.83■■■□□ 2.05
TMEM55B-202ENST00000398020 LMBRD1Q9NUN5 540 aa27.83■■■□□ 2.05
TMEM55B-202ENST00000398020 RNF19AQ9NV58 838 aa27.83■■■□□ 2.05
TMEM55B-202ENST00000398020 HNRNPDLO14979 420 aaKnown RBP27.82■■■□□ 2.04
TMEM55B-202ENST00000398020 RPN1P04843 607 aaKnown RBP27.82■■■□□ 2.04
TMEM55B-202ENST00000398020 HARSP12081 509 aaKnown RBP27.82■■■□□ 2.04
TMEM55B-202ENST00000398020 ZNF568Q3ZCX4 644 aa27.82■■■□□ 2.04
TMEM55B-202ENST00000398020 CLLU1OSQ5K130 101 aa27.82■■■□□ 2.04
TMEM55B-202ENST00000398020 HELQQ8TDG4 1101 aa27.82■■■□□ 2.04
TMEM55B-202ENST00000398020 TIFAQ96CG3 184 aa27.82■■■□□ 2.04
TMEM55B-202ENST00000398020 ZNF689Q96CS4 500 aaPredicted RBP27.82■■■□□ 2.04
TMEM55B-202ENST00000398020 TIGD1Q96MW7 591 aa27.82■■■□□ 2.04
TMEM55B-202ENST00000398020 SLC39A2Q9NP94 309 aa27.82■■■□□ 2.04
TMEM55B-202ENST00000398020 EXOC1Q9NV70 894 aa27.82■■■□□ 2.04
TMEM55B-202ENST00000398020 RNF216Q9NWF9 866 aaPredicted RBP27.82■■■□□ 2.04
TMEM55B-202ENST00000398020 PRPF6O94906 941 aaKnown RBP27.81■■■□□ 2.04
TMEM55B-202ENST00000398020 SCP2P22307 547 aa27.81■■■□□ 2.04
TMEM55B-202ENST00000398020 LIG4P49917 911 aa27.81■■■□□ 2.04
TMEM55B-202ENST00000398020 MRPL10Q7Z7H8 261 aaKnown RBP27.81■■■□□ 2.04
TMEM55B-202ENST00000398020 PTPRHQ9HD43 1115 aa27.81■■■□□ 2.04
TMEM55B-202ENST00000398020 PCDHB13Q9Y5F0 798 aa27.81■■■□□ 2.04
TMEM55B-202ENST00000398020 TBKBP1A7MCY6 615 aa27.81■■■□□ 2.04
TMEM55B-202ENST00000398020 TISP43B9A030 160 aa27.81■■■□□ 2.04
TMEM55B-202ENST00000398020 AKAP5P24588 427 aa27.81■■■□□ 2.04
TMEM55B-202ENST00000398020 ZPBP2Q6X784 338 aa27.81■■■□□ 2.04
TMEM55B-202ENST00000398020 AGMOQ6ZNB7 445 aa27.81■■■□□ 2.04
TMEM55B-202ENST00000398020 SPRED2Q7Z698 418 aa27.81■■■□□ 2.04
TMEM55B-202ENST00000398020 PGBD4Q96DM1 585 aa27.81■■■□□ 2.04
TMEM55B-202ENST00000398020 CDT1Q9H211 546 aa27.81■■■□□ 2.04
TMEM55B-202ENST00000398020 ABLIM1O14639 778 aa27.8■■■□□ 2.04
TMEM55B-202ENST00000398020 TOM1L1O75674 476 aa27.8■■■□□ 2.04
TMEM55B-202ENST00000398020 ITGA4P13612 1032 aa27.8■■■□□ 2.04
TMEM55B-202ENST00000398020 PROZP22891 400 aa27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms