RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 MIS18BP1Q6P0N0 1132 aa10.57□□□□□ -0.72
TRIM39-203ENST00000396547 DPP8Q6V1X1 898 aaPredicted RBP10.57□□□□□ -0.72
TRIM39-203ENST00000396547 RNF217Q8TC41 542 aa10.57□□□□□ -0.72
TRIM39-203ENST00000396547 CCHCR1Q8TD31 782 aa10.57□□□□□ -0.72
TRIM39-203ENST00000396547 MXD3Q9BW11 206 aa10.57□□□□□ -0.72
TRIM39-203ENST00000396547 BATF3Q9NR55 127 aa10.57□□□□□ -0.72
TRIM39-203ENST00000396547 SLC5A4Q9NY91 659 aa10.57□□□□□ -0.72
TRIM39-203ENST00000396547 TAF1P21675 1872 aa10.57□□□□□ -0.72
TRIM39-203ENST00000396547 CHMP2AO43633 222 aa10.57□□□□□ -0.72
TRIM39-203ENST00000396547 FTLP02792 175 aaPredicted RBP10.57□□□□□ -0.72
TRIM39-203ENST00000396547 NUDT17P0C025 328 aa10.57□□□□□ -0.72
TRIM39-203ENST00000396547 NPR1P16066 1061 aa10.57□□□□□ -0.72
TRIM39-203ENST00000396547 DPEP1P16444 411 aa10.57□□□□□ -0.72
TRIM39-203ENST00000396547 SOX5P35711 763 aa10.57□□□□□ -0.72
TRIM39-203ENST00000396547 ABL2P42684 1182 aa10.57□□□□□ -0.72
TRIM39-203ENST00000396547 CC2D2BQ6DHV5 1058 aa10.57□□□□□ -0.72
TRIM39-203ENST00000396547 INTS8Q75QN2 995 aaKnown RBP10.57□□□□□ -0.72
TRIM39-203ENST00000396547 LONP2Q86WA8 852 aa10.57□□□□□ -0.72
TRIM39-203ENST00000396547 FAM186BQ8IYM0 893 aa10.57□□□□□ -0.72
TRIM39-203ENST00000396547 ADGRF4Q8IZF3 695 aa10.57□□□□□ -0.72
TRIM39-203ENST00000396547 ZDHHC14Q8IZN3 488 aa10.57□□□□□ -0.72
TRIM39-203ENST00000396547 CNBD1Q8NA66 436 aa10.57□□□□□ -0.72
TRIM39-203ENST00000396547 SPIRE2Q8WWL2 714 aa10.57□□□□□ -0.72
TRIM39-203ENST00000396547 SLC35C1Q96A29 364 aa10.57□□□□□ -0.72
TRIM39-203ENST00000396547 TXLNGYQ9BZA5 131 aa10.57□□□□□ -0.72
TRIM39-203ENST00000396547 PPP1R12CQ9BZL4 782 aa10.57□□□□□ -0.72
TRIM39-203ENST00000396547 TAOK3Q9H2K8 898 aa10.57□□□□□ -0.72
TRIM39-203ENST00000396547 HAO1Q9UJM8 370 aa10.57□□□□□ -0.72
TRIM39-203ENST00000396547 DNM3Q9UQ16 869 aa10.57□□□□□ -0.72
TRIM39-203ENST00000396547 BTNL10A8MVZ5 291 aa10.57□□□□□ -0.72
TRIM39-203ENST00000396547 LGR5O75473 907 aa10.57□□□□□ -0.72
TRIM39-203ENST00000396547 DLATP10515 647 aaKnown RBP10.57□□□□□ -0.72
TRIM39-203ENST00000396547 PYGMP11217 842 aa10.57□□□□□ -0.72
TRIM39-203ENST00000396547 HOXD13P35453 343 aa10.57□□□□□ -0.72
TRIM39-203ENST00000396547 MXRA7P84157 204 aa10.57□□□□□ -0.72
TRIM39-203ENST00000396547 GRIK3Q13003 919 aa10.57□□□□□ -0.72
TRIM39-203ENST00000396547 MPP2Q14168 576 aa10.57□□□□□ -0.72
TRIM39-203ENST00000396547 RBM26Q5T8P6 1007 aaKnown RBP10.57□□□□□ -0.72
TRIM39-203ENST00000396547 SEL1L2Q5TEA6 688 aa10.57□□□□□ -0.72
TRIM39-203ENST00000396547 FRMD5Q7Z6J6 570 aa10.57□□□□□ -0.72
TRIM39-203ENST00000396547 PRUNE1Q86TP1 453 aa10.57□□□□□ -0.72
TRIM39-203ENST00000396547 CATSPER3Q86XQ3 398 aa10.57□□□□□ -0.72
TRIM39-203ENST00000396547 MYCT1Q8N699 235 aa10.57□□□□□ -0.72
TRIM39-203ENST00000396547 MASTLQ96GX5 879 aa10.57□□□□□ -0.72
TRIM39-203ENST00000396547 RUSC1Q9BVN2 902 aa10.57□□□□□ -0.72
TRIM39-203ENST00000396547 STMN4Q9H169 189 aaPredicted RBP10.57□□□□□ -0.72
TRIM39-203ENST00000396547 CDC42EP4Q9H3Q1 356 aaKnown RBP10.57□□□□□ -0.72
TRIM39-203ENST00000396547 ZNF287Q9HBT7 754 aa10.57□□□□□ -0.72
TRIM39-203ENST00000396547 SIX2Q9NPC8 291 aa10.57□□□□□ -0.72
TRIM39-203ENST00000396547 RGL1Q9NZL6 768 aa10.57□□□□□ -0.72
TRIM39-203ENST00000396547 ARL2BPQ9Y2Y0 163 aa10.57□□□□□ -0.72
TRIM39-203ENST00000396547 CCDC88AQ3V6T2 1871 aa10.56□□□□□ -0.72
TRIM39-203ENST00000396547 A0A1W2PRG0 241 aa10.56□□□□□ -0.72
TRIM39-203ENST00000396547 FAM187AA6NFU0 413 aa10.56□□□□□ -0.72
TRIM39-203ENST00000396547 SMNDC1O75940 238 aaKnown RBP eCLIP10.56□□□□□ -0.72
TRIM39-203ENST00000396547 LMNB1P20700 586 aa10.56□□□□□ -0.72
TRIM39-203ENST00000396547 COMTP21964 271 aa10.56□□□□□ -0.72
TRIM39-203ENST00000396547 RPL13P26373 211 aaKnown RBP10.56□□□□□ -0.72
TRIM39-203ENST00000396547 CTCFP49711 727 aaPredicted RBP10.56□□□□□ -0.72
TRIM39-203ENST00000396547 RIPK1Q13546 671 aa10.56□□□□□ -0.72
TRIM39-203ENST00000396547 GIT2Q14161 759 aa10.56□□□□□ -0.72
TRIM39-203ENST00000396547 SF3B3Q15393 1217 aaKnown RBP10.56□□□□□ -0.72
TRIM39-203ENST00000396547 UBL4BQ8N7F7 174 aa10.56□□□□□ -0.72
TRIM39-203ENST00000396547 ATG4AQ8WYN0 398 aa10.56□□□□□ -0.72
TRIM39-203ENST00000396547 CNKSR1Q969H4 720 aa10.56□□□□□ -0.72
TRIM39-203ENST00000396547 TRIM7Q9C029 511 aa10.56□□□□□ -0.72
TRIM39-203ENST00000396547 COL4A1P02462 1669 aa10.56□□□□□ -0.72
TRIM39-203ENST00000396547 PFASO15067 1338 aa10.56□□□□□ -0.72
TRIM39-203ENST00000396547 FOXN3O00409 490 aaPredicted RBP10.56□□□□□ -0.72
TRIM39-203ENST00000396547 ZBTB39O15060 712 aa10.56□□□□□ -0.72
TRIM39-203ENST00000396547 PPP1R11O60927 126 aaPredicted RBP10.56□□□□□ -0.72
TRIM39-203ENST00000396547 PHF2O75151 1096 aa10.56□□□□□ -0.72
TRIM39-203ENST00000396547 CHKAP35790 457 aa10.56□□□□□ -0.72
TRIM39-203ENST00000396547 BNIP1Q12981 228 aa10.56□□□□□ -0.72
TRIM39-203ENST00000396547 IKQ13123 557 aaPredicted RBP10.56□□□□□ -0.72
TRIM39-203ENST00000396547 CYP4F22Q6NT55 531 aa10.56□□□□□ -0.72
TRIM39-203ENST00000396547 ARHGAP27Q6ZUM4 889 aa10.56□□□□□ -0.72
TRIM39-203ENST00000396547 NBPF5PQ86XG9 351 aaPredicted RBP10.56□□□□□ -0.72
TRIM39-203ENST00000396547 KIAA0825Q8IV33 1275 aa10.56□□□□□ -0.72
TRIM39-203ENST00000396547 NEDD1Q8NHV4 660 aa10.56□□□□□ -0.72
TRIM39-203ENST00000396547 SEC14L1Q92503 715 aa10.56□□□□□ -0.72
TRIM39-203ENST00000396547 SPOCK2Q92563 424 aa10.56□□□□□ -0.72
TRIM39-203ENST00000396547 ERP27Q96DN0 273 aa10.56□□□□□ -0.72
TRIM39-203ENST00000396547 NAF1Q96HR8 494 aaKnown RBP10.56□□□□□ -0.72
TRIM39-203ENST00000396547 PITPNM3Q9BZ71 974 aa10.56□□□□□ -0.72
TRIM39-203ENST00000396547 PCIF1Q9H4Z3 704 aa10.56□□□□□ -0.72
TRIM39-203ENST00000396547 NKIRAS1Q9NYS0 192 aa10.56□□□□□ -0.72
TRIM39-203ENST00000396547 DPPA5A6NC42 116 aa10.55□□□□□ -0.72
TRIM39-203ENST00000396547 THAP12O43422 761 aa10.55□□□□□ -0.72
TRIM39-203ENST00000396547 GJC1P36383 396 aa10.55□□□□□ -0.72
TRIM39-203ENST00000396547 PTGIRP43119 386 aa10.55□□□□□ -0.72
TRIM39-203ENST00000396547 EDRF1Q3B7T1 1238 aa10.55□□□□□ -0.72
TRIM39-203ENST00000396547 CYP4X1Q8N118 509 aa10.55□□□□□ -0.72
TRIM39-203ENST00000396547 FBF1Q8TES7 1133 aa10.55□□□□□ -0.72
TRIM39-203ENST00000396547 CARD9Q9H257 536 aa10.55□□□□□ -0.72
TRIM39-203ENST00000396547 JMJD4Q9H9V9 463 aa10.55□□□□□ -0.72
TRIM39-203ENST00000396547 CLDN3O15551 220 aa10.55□□□□□ -0.72
TRIM39-203ENST00000396547 TMEM253P0C7T8 217 aa10.55□□□□□ -0.72
TRIM39-203ENST00000396547 AKR1B1P15121 316 aa10.55□□□□□ -0.72
TRIM39-203ENST00000396547 PRKCIP41743 596 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms