RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 TMEM132AQ24JP5 1023 aa18.21■□□□□ 0.51
CXCL1-201ENST00000395761 SLC27A1Q6PCB7 646 aa18.21■□□□□ 0.51
CXCL1-201ENST00000395761 AGMOQ6ZNB7 445 aa18.21■□□□□ 0.51
CXCL1-201ENST00000395761 HAUS6Q7Z4H7 955 aa18.21■□□□□ 0.51
CXCL1-201ENST00000395761 SFR1Q86XK3 245 aa18.21■□□□□ 0.51
CXCL1-201ENST00000395761 CMTR2Q8IYT2 770 aaKnown RBP18.21■□□□□ 0.51
CXCL1-201ENST00000395761 FSIP1Q8NA03 581 aa18.21■□□□□ 0.51
CXCL1-201ENST00000395761 HELQQ8TDG4 1101 aa18.21■□□□□ 0.51
CXCL1-201ENST00000395761 ARNTL2Q8WYA1 636 aa18.21■□□□□ 0.51
CXCL1-201ENST00000395761 TGS1Q96RS0 853 aaKnown RBP18.21■□□□□ 0.51
CXCL1-201ENST00000395761 FIZ1Q96SL8 496 aa18.21■□□□□ 0.51
CXCL1-201ENST00000395761 CDX2Q99626 313 aaPredicted RBP18.21■□□□□ 0.51
CXCL1-201ENST00000395761 TMEM117Q9H0C3 514 aa18.21■□□□□ 0.51
CXCL1-201ENST00000395761 TNMDQ9H2S6 317 aa18.21■□□□□ 0.51
CXCL1-201ENST00000395761 HCSTQ9UBK5 93 aa18.21■□□□□ 0.51
CXCL1-201ENST00000395761 PHLPP2Q6ZVD8 1323 aa18.21■□□□□ 0.51
CXCL1-201ENST00000395761 HOXA2O43364 376 aa18.2■□□□□ 0.5
CXCL1-201ENST00000395761 ACTN4O43707 911 aaKnown RBP18.2■□□□□ 0.5
CXCL1-201ENST00000395761 IDEP14735 1019 aa18.2■□□□□ 0.5
CXCL1-201ENST00000395761 CASP1P29466 404 aa18.2■□□□□ 0.5
CXCL1-201ENST00000395761 ATF7IP2Q5U623 682 aa18.2■□□□□ 0.5
CXCL1-201ENST00000395761 LRRC55Q6ZSA7 311 aa18.2■□□□□ 0.5
CXCL1-201ENST00000395761 FAM178BQ8IXR5 827 aa18.2■□□□□ 0.5
CXCL1-201ENST00000395761 GRAMD1CQ8IYS0 662 aa18.2■□□□□ 0.5
CXCL1-201ENST00000395761 ACO2Q99798 780 aaKnown RBP18.2■□□□□ 0.5
CXCL1-201ENST00000395761 TARS2Q9BW92 718 aaKnown RBP18.2■□□□□ 0.5
CXCL1-201ENST00000395761 TRIM9Q9C026 710 aa18.2■□□□□ 0.5
CXCL1-201ENST00000395761 TBC1D7Q9P0N9 293 aa18.2■□□□□ 0.5
CXCL1-201ENST00000395761 FRMD3A2A2Y4 597 aa18.19■□□□□ 0.5
CXCL1-201ENST00000395761 K7ENM7 598 aa18.19■□□□□ 0.5
CXCL1-201ENST00000395761 N4BP3O15049 544 aa18.19■□□□□ 0.5
CXCL1-201ENST00000395761 OFD1O75665 1012 aa18.19■□□□□ 0.5
CXCL1-201ENST00000395761 SLFN14P0C7P3 912 aa18.19■□□□□ 0.5
CXCL1-201ENST00000395761 AFMP43652 599 aa18.19■□□□□ 0.5
CXCL1-201ENST00000395761 EPC2Q52LR7 807 aa18.19■□□□□ 0.5
CXCL1-201ENST00000395761 ZC2HC1CQ53FD0 456 aaPredicted RBP18.19■□□□□ 0.5
CXCL1-201ENST00000395761 TMEM192Q8IY95 271 aa18.19■□□□□ 0.5
CXCL1-201ENST00000395761 MYLIPQ8WY64 445 aa18.19■□□□□ 0.5
CXCL1-201ENST00000395761 MRPS27Q92552 414 aaKnown RBP18.19■□□□□ 0.5
CXCL1-201ENST00000395761 CLP1Q92989 425 aaKnown RBP18.19■□□□□ 0.5
CXCL1-201ENST00000395761 PGBD4Q96DM1 585 aa18.19■□□□□ 0.5
CXCL1-201ENST00000395761 C7orf25Q9BPX7 421 aa18.19■□□□□ 0.5
CXCL1-201ENST00000395761 APOL6Q9BWW8 343 aa18.19■□□□□ 0.5
CXCL1-201ENST00000395761 MRPL4Q9BYD3 311 aaKnown RBP18.19■□□□□ 0.5
CXCL1-201ENST00000395761 TRIM6Q9C030 488 aaPredicted RBP18.19■□□□□ 0.5
CXCL1-201ENST00000395761 BLZF1Q9H2G9 400 aa18.19■□□□□ 0.5
CXCL1-201ENST00000395761 NXF3Q9H4D5 531 aaKnown RBP18.19■□□□□ 0.5
CXCL1-201ENST00000395761 PTPRHQ9HD43 1115 aa18.19■□□□□ 0.5
CXCL1-201ENST00000395761 TYW1Q9NV66 732 aaKnown RBP18.19■□□□□ 0.5
CXCL1-201ENST00000395761 PANK4Q9NVE7 773 aa18.19■□□□□ 0.5
CXCL1-201ENST00000395761 H0YCG3 227 aa18.18■□□□□ 0.5
CXCL1-201ENST00000395761 ITGA4P13612 1032 aa18.18■□□□□ 0.5
CXCL1-201ENST00000395761 GAP43P17677 238 aa18.18■□□□□ 0.5
CXCL1-201ENST00000395761 SYKP43405 635 aa18.18■□□□□ 0.5
CXCL1-201ENST00000395761 AFF1P51825 1210 aaKnown RBP18.18■□□□□ 0.5
CXCL1-201ENST00000395761 AMPD3Q01432 767 aa18.18■□□□□ 0.5
CXCL1-201ENST00000395761 STRN3Q13033 797 aa18.18■□□□□ 0.5
CXCL1-201ENST00000395761 HERC4Q5GLZ8 1057 aaPredicted RBP18.18■□□□□ 0.5
CXCL1-201ENST00000395761 ZNF720Q7Z2F6 126 aa18.18■□□□□ 0.5
CXCL1-201ENST00000395761 ABI1Q8IZP0 508 aa18.18■□□□□ 0.5
CXCL1-201ENST00000395761 CNNM3Q8NE01 707 aa18.18■□□□□ 0.5
CXCL1-201ENST00000395761 PAGE5Q96GU1 130 aa18.18■□□□□ 0.5
CXCL1-201ENST00000395761 ZBTB45Q96K62 511 aaPredicted RBP18.18■□□□□ 0.5
CXCL1-201ENST00000395761 PYM1Q9BRP8 204 aaKnown RBP18.18■□□□□ 0.5
CXCL1-201ENST00000395761 FGFBP2Q9BYJ0 223 aa18.18■□□□□ 0.5
CXCL1-201ENST00000395761 LRRC27Q9C0I9 530 aa18.18■□□□□ 0.5
CXCL1-201ENST00000395761 MAGEF1Q9HAY2 307 aa18.18■□□□□ 0.5
CXCL1-201ENST00000395761 CHD7Q9P2D1 2997 aa18.18■□□□□ 0.5
CXCL1-201ENST00000395761 TBX20Q9UMR3 447 aa18.18■□□□□ 0.5
CXCL1-201ENST00000395761 TNFSF13BQ9Y275 285 aa18.18■□□□□ 0.5
CXCL1-201ENST00000395761 MYH11P35749 1972 aa18.18■□□□□ 0.5
CXCL1-201ENST00000395761 AKAP5P24588 427 aa18.17■□□□□ 0.5
CXCL1-201ENST00000395761 BMPR1AP36894 532 aa18.17■□□□□ 0.5
CXCL1-201ENST00000395761 ASIC1P78348 528 aa18.17■□□□□ 0.5
CXCL1-201ENST00000395761 GTF2BQ00403 316 aa18.17■□□□□ 0.5
CXCL1-201ENST00000395761 CUL4BQ13620 913 aa18.17■□□□□ 0.5
CXCL1-201ENST00000395761 ADGRE1Q14246 886 aa18.17■□□□□ 0.5
CXCL1-201ENST00000395761 CNNM4Q6P4Q7 775 aa18.17■□□□□ 0.5
CXCL1-201ENST00000395761 GLB1LQ6UWU2 654 aa18.17■□□□□ 0.5
CXCL1-201ENST00000395761 ZBTB33Q86T24 672 aa18.17■□□□□ 0.5
CXCL1-201ENST00000395761 CEP57L1Q8IYX8 460 aa18.17■□□□□ 0.5
CXCL1-201ENST00000395761 KCNN1Q92952 543 aa18.17■□□□□ 0.5
CXCL1-201ENST00000395761 HPS3Q969F9 1004 aa18.17■□□□□ 0.5
CXCL1-201ENST00000395761 CWH43Q9H720 699 aa18.17■□□□□ 0.5
CXCL1-201ENST00000395761 RSAD1Q9HA92 442 aa18.17■□□□□ 0.5
CXCL1-201ENST00000395761 INPP5FQ9Y2H2 1132 aa18.17■□□□□ 0.5
CXCL1-201ENST00000395761 FNDC1Q4ZHG4 1894 aaPredicted RBP18.17■□□□□ 0.5
CXCL1-201ENST00000395761 GOLGA6L4A6NEF3 574 aa18.16■□□□□ 0.5
CXCL1-201ENST00000395761 GOLGA6L22H0YM25 854 aa18.16■□□□□ 0.5
CXCL1-201ENST00000395761 ABLIM1O14639 778 aa18.16■□□□□ 0.5
CXCL1-201ENST00000395761 LPXNO60711 386 aa18.16■□□□□ 0.5
CXCL1-201ENST00000395761 PROZP22891 400 aa18.16■□□□□ 0.5
CXCL1-201ENST00000395761 CTNNB1P35222 781 aa18.16■□□□□ 0.5
CXCL1-201ENST00000395761 COASYQ13057 564 aa18.16■□□□□ 0.5
CXCL1-201ENST00000395761 NOMO2Q5JPE7 1267 aa18.16■□□□□ 0.5
CXCL1-201ENST00000395761 CCDC65Q8IXS2 484 aa18.16■□□□□ 0.5
CXCL1-201ENST00000395761 FBXO22Q8NEZ5 403 aa18.16■□□□□ 0.5
CXCL1-201ENST00000395761 GDPD5Q8WTR4 605 aa18.16■□□□□ 0.5
CXCL1-201ENST00000395761 GAD1Q99259 594 aa18.16■□□□□ 0.5
CXCL1-201ENST00000395761 ADPGKQ9BRR6 497 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms