RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 ACPPP15309 386 aa6.97□□□□□ -1.29
PTPN20-208ENST00000395727 GNA11P29992 359 aa6.97□□□□□ -1.29
PTPN20-208ENST00000395727 KCNJ6P48051 423 aa6.97□□□□□ -1.29
PTPN20-208ENST00000395727 GSK3AP49840 483 aa6.97□□□□□ -1.29
PTPN20-208ENST00000395727 SETQ01105 290 aaPredicted RBP6.97□□□□□ -1.29
PTPN20-208ENST00000395727 TAP1Q03518 808 aa6.97□□□□□ -1.29
PTPN20-208ENST00000395727 IKBKEQ14164 716 aa6.97□□□□□ -1.29
PTPN20-208ENST00000395727 PKN1Q16512 942 aa6.97□□□□□ -1.29
PTPN20-208ENST00000395727 DNAJC14Q6Y2X3 702 aaPredicted RBP6.97□□□□□ -1.29
PTPN20-208ENST00000395727 Q6ZUG5 572 aa6.97□□□□□ -1.29
PTPN20-208ENST00000395727 RUFY3Q7L099 469 aa6.97□□□□□ -1.29
PTPN20-208ENST00000395727 PLPPR4Q7Z2D5 763 aa6.97□□□□□ -1.29
PTPN20-208ENST00000395727 RAB11FIP4Q86YS3 637 aa6.97□□□□□ -1.29
PTPN20-208ENST00000395727 GALNT12Q8IXK2 581 aa6.97□□□□□ -1.29
PTPN20-208ENST00000395727 CCDC148Q8NFR7 591 aa6.97□□□□□ -1.29
PTPN20-208ENST00000395727 BICD2Q8TD16 824 aa6.97□□□□□ -1.29
PTPN20-208ENST00000395727 PPP1R13LQ8WUF5 828 aa6.97□□□□□ -1.29
PTPN20-208ENST00000395727 BRF1Q92994 677 aa6.97□□□□□ -1.29
PTPN20-208ENST00000395727 ZNF274Q96GC6 653 aaPredicted RBP6.97□□□□□ -1.29
PTPN20-208ENST00000395727 TCEANC2Q96MN5 208 aa6.97□□□□□ -1.29
PTPN20-208ENST00000395727 JAKMIP1Q96N16 626 aaKnown RBP6.97□□□□□ -1.29
PTPN20-208ENST00000395727 FTOQ9C0B1 505 aaKnown RBP eCLIP6.97□□□□□ -1.29
PTPN20-208ENST00000395727 RASSF4Q9H2L5 321 aa6.97□□□□□ -1.29
PTPN20-208ENST00000395727 SMARCAD1Q9H4L7 1026 aa6.97□□□□□ -1.29
PTPN20-208ENST00000395727 C6orf50Q9HD87 102 aa6.97□□□□□ -1.29
PTPN20-208ENST00000395727 SH3GLB2Q9NR46 395 aa6.97□□□□□ -1.29
PTPN20-208ENST00000395727 DZANK1Q9NVP4 752 aa6.97□□□□□ -1.29
PTPN20-208ENST00000395727 LMCD1Q9NZU5 365 aa6.97□□□□□ -1.29
PTPN20-208ENST00000395727 SLC9A2Q9UBY0 812 aa6.97□□□□□ -1.29
PTPN20-208ENST00000395727 SQORQ9Y6N5 450 aa6.97□□□□□ -1.29
PTPN20-208ENST00000395727 COL1A2P08123 1366 aa6.96□□□□□ -1.29
PTPN20-208ENST00000395727 MICAL3Q7RTP6 2002 aa6.96□□□□□ -1.29
PTPN20-208ENST00000395727 hCG_1642624A0A1W2PR95 340 aa6.96□□□□□ -1.3
PTPN20-208ENST00000395727 RRN3P2A6NIE6 340 aa6.96□□□□□ -1.3
PTPN20-208ENST00000395727 RNF225M0QZC1 329 aaPredicted RBP6.96□□□□□ -1.3
PTPN20-208ENST00000395727 EIF5BO60841 1220 aaKnown RBP6.96□□□□□ -1.3
PTPN20-208ENST00000395727 CA3P07451 260 aa6.96□□□□□ -1.3
PTPN20-208ENST00000395727 PDIA3P30101 505 aaKnown RBP6.96□□□□□ -1.3
PTPN20-208ENST00000395727 CIITAP33076 1130 aa6.96□□□□□ -1.3
PTPN20-208ENST00000395727 THPOP40225 353 aa6.96□□□□□ -1.3
PTPN20-208ENST00000395727 RABGGTBP53611 331 aa6.96□□□□□ -1.3
PTPN20-208ENST00000395727 CHMP4BP1P59074 171 aa6.96□□□□□ -1.3
PTPN20-208ENST00000395727 ANAPC15P60006 121 aa6.96□□□□□ -1.3
PTPN20-208ENST00000395727 HTRA4P83105 476 aaPredicted RBP6.96□□□□□ -1.3
PTPN20-208ENST00000395727 FGD1P98174 961 aa6.96□□□□□ -1.3
PTPN20-208ENST00000395727 ZNF200P98182 395 aaPredicted RBP6.96□□□□□ -1.3
PTPN20-208ENST00000395727 PLCB3Q01970 1234 aa6.96□□□□□ -1.3
PTPN20-208ENST00000395727 MGAT3Q09327 533 aa6.96□□□□□ -1.3
PTPN20-208ENST00000395727 APOBRQ0VD83 1088 aa6.96□□□□□ -1.3
PTPN20-208ENST00000395727 KCNMA1Q12791 1236 aa6.96□□□□□ -1.3
PTPN20-208ENST00000395727 ITGB3BPQ13352 177 aaPredicted RBP6.96□□□□□ -1.3
PTPN20-208ENST00000395727 TOB2Q14106 344 aaPredicted RBP6.96□□□□□ -1.3
PTPN20-208ENST00000395727 ADGRE1Q14246 886 aa6.96□□□□□ -1.3
PTPN20-208ENST00000395727 MARCH8Q5T0T0 291 aa6.96□□□□□ -1.3
PTPN20-208ENST00000395727 REXO1Q8N1G1 1221 aaKnown RBP6.96□□□□□ -1.3
PTPN20-208ENST00000395727 USP38Q8NB14 1042 aa6.96□□□□□ -1.3
PTPN20-208ENST00000395727 TET1Q8NFU7 2136 aa6.96□□□□□ -1.3
PTPN20-208ENST00000395727 ATXN2LQ8WWM7 1075 aaKnown RBP6.96□□□□□ -1.3
PTPN20-208ENST00000395727 RAD9AQ99638 391 aa6.96□□□□□ -1.3
PTPN20-208ENST00000395727 SDF4Q9BRK5 362 aa6.96□□□□□ -1.3
PTPN20-208ENST00000395727 C22orf23Q9BZE7 217 aa6.96□□□□□ -1.3
PTPN20-208ENST00000395727 PRDM12Q9H4Q4 367 aa6.96□□□□□ -1.3
PTPN20-208ENST00000395727 SUV39H2Q9H5I1 410 aa6.96□□□□□ -1.3
PTPN20-208ENST00000395727 AGO4Q9HCK5 861 aaKnown RBP6.96□□□□□ -1.3
PTPN20-208ENST00000395727 SETD4Q9NVD3 440 aa6.96□□□□□ -1.3
PTPN20-208ENST00000395727 TUBE1Q9UJT0 475 aa6.96□□□□□ -1.3
PTPN20-208ENST00000395727 KDM3AQ9Y4C1 1321 aa6.96□□□□□ -1.3
PTPN20-208ENST00000395727 TRIP12Q14669 1992 aaPredicted RBP6.95□□□□□ -1.3
PTPN20-208ENST00000395727 FAM86B1E9PN63 330 aa6.95□□□□□ -1.3
PTPN20-208ENST00000395727 DLL1O00548 723 aa6.95□□□□□ -1.3
PTPN20-208ENST00000395727 DHX15O43143 795 aaKnown RBP6.95□□□□□ -1.3
PTPN20-208ENST00000395727 SORBS3O60504 671 aa6.95□□□□□ -1.3
PTPN20-208ENST00000395727 FAM86B2P0C5J1 330 aa6.95□□□□□ -1.3
PTPN20-208ENST00000395727 CPA1P15085 419 aa6.95□□□□□ -1.3
PTPN20-208ENST00000395727 COL8A1P27658 744 aa6.95□□□□□ -1.3
PTPN20-208ENST00000395727 USP11P51784 963 aa6.95□□□□□ -1.3
PTPN20-208ENST00000395727 ACTR2P61160 394 aa6.95□□□□□ -1.3
PTPN20-208ENST00000395727 ERVK-21P61565 698 aa6.95□□□□□ -1.3
PTPN20-208ENST00000395727 DEFB103AP81534 67 aa6.95□□□□□ -1.3
PTPN20-208ENST00000395727 PPFIA1Q13136 1202 aa6.95□□□□□ -1.3
PTPN20-208ENST00000395727 GRIK4Q16099 956 aa6.95□□□□□ -1.3
PTPN20-208ENST00000395727 ENOX2Q16206 610 aaKnown RBP6.95□□□□□ -1.3
PTPN20-208ENST00000395727 TCTN1Q2MV58 587 aa6.95□□□□□ -1.3
PTPN20-208ENST00000395727 GALNT17Q6IS24 598 aa6.95□□□□□ -1.3
PTPN20-208ENST00000395727 ZNF746Q6NUN9 644 aaPredicted RBP6.95□□□□□ -1.3
PTPN20-208ENST00000395727 MOXD1Q6UVY6 613 aa6.95□□□□□ -1.3
PTPN20-208ENST00000395727 ABHD15Q6UXT9 468 aa6.95□□□□□ -1.3
PTPN20-208ENST00000395727 ADAMTSL4Q6UY14 1074 aa6.95□□□□□ -1.3
PTPN20-208ENST00000395727 RSPH3Q86UC2 560 aa6.95□□□□□ -1.3
PTPN20-208ENST00000395727 SMAP1Q8IYB5 467 aaPredicted RBP6.95□□□□□ -1.3
PTPN20-208ENST00000395727 DAGLBQ8NCG7 672 aa6.95□□□□□ -1.3
PTPN20-208ENST00000395727 DBF4BQ8NFT6 615 aa6.95□□□□□ -1.3
PTPN20-208ENST00000395727 CYP2W1Q8TAV3 490 aa6.95□□□□□ -1.3
PTPN20-208ENST00000395727 SEPT8Q92599 483 aa6.95□□□□□ -1.3
PTPN20-208ENST00000395727 TOP1MTQ969P6 601 aa6.95□□□□□ -1.3
PTPN20-208ENST00000395727 SAMD11Q96NU1 681 aa6.95□□□□□ -1.3
PTPN20-208ENST00000395727 HHIPQ96QV1 700 aa6.95□□□□□ -1.3
PTPN20-208ENST00000395727 PCYT2Q99447 389 aa6.95□□□□□ -1.3
PTPN20-208ENST00000395727 POP1Q99575 1024 aaKnown RBP6.95□□□□□ -1.3
PTPN20-208ENST00000395727 PLVAPQ9BX97 442 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms