RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 SYF2O95926 243 aaKnown RBP15.1■□□□□ 0.01
SNCA-204ENST00000394989 ABCB4P21439 1286 aa15.1■□□□□ 0.01
SNCA-204ENST00000394989 MXI1P50539 228 aa15.1■□□□□ 0.01
SNCA-204ENST00000394989 NT5DC3Q86UY8 548 aa15.1■□□□□ 0.01
SNCA-204ENST00000394989 PARD3BQ8TEW8 1205 aa15.1■□□□□ 0.01
SNCA-204ENST00000394989 CYP26B1Q9NR63 512 aa15.1■□□□□ 0.01
SNCA-204ENST00000394989 SEPT9Q9UHD8 586 aaPredicted RBP15.1■□□□□ 0.01
SNCA-204ENST00000394989 A0A0G2JMZ2 1700 aa15.1■□□□□ 0.01
SNCA-204ENST00000394989 TMEM253P0C7T8 217 aa15.1■□□□□ 0.01
SNCA-204ENST00000394989 ATP4AP20648 1035 aa15.1■□□□□ 0.01
SNCA-204ENST00000394989 AARSP49588 968 aaKnown RBP eCLIP15.1■□□□□ 0.01
SNCA-204ENST00000394989 FAM193AP78312 1265 aa15.1■□□□□ 0.01
SNCA-204ENST00000394989 MAP2K1Q02750 393 aaPredicted RBP15.1■□□□□ 0.01
SNCA-204ENST00000394989 METTL13Q8N6R0 699 aa15.1■□□□□ 0.01
SNCA-204ENST00000394989 GOLGA6L1Q8N7Z2 621 aa15.1■□□□□ 0.01
SNCA-204ENST00000394989 FBXL18Q96ME1 805 aa15.1■□□□□ 0.01
SNCA-204ENST00000394989 THAP2Q9H0W7 228 aa15.1■□□□□ 0.01
SNCA-204ENST00000394989 USP20Q9Y2K6 914 aa15.1■□□□□ 0.01
SNCA-204ENST00000394989 STAM2O75886 525 aa15.1■□□□□ 0.01
SNCA-204ENST00000394989 CETN1Q12798 172 aa15.1■□□□□ 0.01
SNCA-204ENST00000394989 SUPT20HL1Q3ZLR7 823 aa15.1■□□□□ 0.01
SNCA-204ENST00000394989 GLE1Q53GS7 698 aaKnown RBP15.1■□□□□ 0.01
SNCA-204ENST00000394989 DAAM2Q86T65 1068 aa15.1■□□□□ 0.01
SNCA-204ENST00000394989 CCDC127Q96BQ5 260 aa15.1■□□□□ 0.01
SNCA-204ENST00000394989 HVCN1Q96D96 273 aa15.1■□□□□ 0.01
SNCA-204ENST00000394989 CDHR1Q96JP9 859 aa15.1■□□□□ 0.01
SNCA-204ENST00000394989 KREMEN1Q96MU8 473 aa15.1■□□□□ 0.01
SNCA-204ENST00000394989 AGPAT1Q99943 283 aa15.1■□□□□ 0.01
SNCA-204ENST00000394989 C17orf75Q9HAS0 396 aa15.1■□□□□ 0.01
SNCA-204ENST00000394989 TOPORSQ9NS56 1045 aaPredicted RBP15.1■□□□□ 0.01
SNCA-204ENST00000394989 EXOC7Q9UPT5 735 aa15.1■□□□□ 0.01
SNCA-204ENST00000394989 BUB1BO60566 1050 aaPredicted RBP15.09■□□□□ 0.01
SNCA-204ENST00000394989 DGAT1O75907 488 aa15.09■□□□□ 0.01
SNCA-204ENST00000394989 PPATQ06203 517 aa15.09■□□□□ 0.01
SNCA-204ENST00000394989 RFFLQ8WZ73 363 aa15.09■□□□□ 0.01
SNCA-204ENST00000394989 HES6Q96HZ4 224 aa15.09■□□□□ 0.01
SNCA-204ENST00000394989 KRT12Q99456 494 aa15.09■□□□□ 0.01
SNCA-204ENST00000394989 ACP6Q9NPH0 428 aa15.09■□□□□ 0.01
SNCA-204ENST00000394989 BTBD7Q9P203 1132 aa15.09■□□□□ 0.01
SNCA-204ENST00000394989 COG5Q9UP83 839 aa15.09■□□□□ 0.01
SNCA-204ENST00000394989 MYH9P35579 1960 aaKnown RBP15.09■□□□□ 0.01
SNCA-204ENST00000394989 SBF1O95248 1867 aa15.09■□□□□ 0.01
SNCA-204ENST00000394989 AGPSO00116 658 aa15.09■□□□□ 0.01
SNCA-204ENST00000394989 CCDC172P0C7W6 258 aa15.09■□□□□ 0.01
SNCA-204ENST00000394989 TNFRSF8P28908 595 aa15.09■□□□□ 0.01
SNCA-204ENST00000394989 GNPTABQ3T906 1256 aa15.09■□□□□ 0.01
SNCA-204ENST00000394989 TTC31Q49AM3 519 aaPredicted RBP15.09■□□□□ 0.01
SNCA-204ENST00000394989 CYFIP1Q7L576 1253 aa15.09■□□□□ 0.01
SNCA-204ENST00000394989 PEX26Q7Z412 305 aa15.09■□□□□ 0.01
SNCA-204ENST00000394989 ELMO3Q96BJ8 720 aa15.09■□□□□ 0.01
SNCA-204ENST00000394989 SUPT20HL2P0C7V6 817 aa15.08■□□□□ 0.01
SNCA-204ENST00000394989 TNFAIP3P21580 790 aa15.08■□□□□ 0.01
SNCA-204ENST00000394989 LBX2Q6XYB7 198 aa15.08■□□□□ 0.01
SNCA-204ENST00000394989 FMNL3Q8IVF7 1028 aa15.08■□□□□ 0.01
SNCA-204ENST00000394989 ACTRT1Q8TDG2 376 aa15.08■□□□□ 0.01
SNCA-204ENST00000394989 RIN2Q8WYP3 895 aaPredicted RBP15.08■□□□□ 0.01
SNCA-204ENST00000394989 TAF4BQ92750 862 aa15.08■□□□□ 0.01
SNCA-204ENST00000394989 MFSD14AQ96MC6 490 aa15.08■□□□□ 0.01
SNCA-204ENST00000394989 GDF3Q9NR23 364 aa15.08■□□□□ 0.01
SNCA-204ENST00000394989 ARHGAP28Q9P2N2 729 aa15.08■□□□□ 0.01
SNCA-204ENST00000394989 SUCLA2Q9P2R7 463 aaPredicted RBP15.08■□□□□ 0.01
SNCA-204ENST00000394989 SYNGAP1Q96PV0 1343 aa15.08■□□□□ 0
SNCA-204ENST00000394989 ESYT3A0FGR9 886 aa15.08■□□□□ 0
SNCA-204ENST00000394989 IBSPP21815 317 aaPredicted RBP15.08■□□□□ 0
SNCA-204ENST00000394989 RTP1P59025 263 aa15.08■□□□□ 0
SNCA-204ENST00000394989 MCPH1Q8NEM0 835 aa15.08■□□□□ 0
SNCA-204ENST00000394989 SCFD2Q8WU76 684 aa15.08■□□□□ 0
SNCA-204ENST00000394989 FAM84AQ96KN4 292 aa15.08■□□□□ 0
SNCA-204ENST00000394989 SEPT11Q9NVA2 429 aaKnown RBP15.08■□□□□ 0
SNCA-204ENST00000394989 COQ4Q9Y3A0 265 aa15.08■□□□□ 0
SNCA-204ENST00000394989 DDNO94850 711 aaPredicted RBP15.08■□□□□ 0
SNCA-204ENST00000394989 PPARDQ03181 441 aa15.08■□□□□ 0
SNCA-204ENST00000394989 TRADDQ15628 312 aa15.08■□□□□ 0
SNCA-204ENST00000394989 MTERF2Q49AM1 385 aa15.08■□□□□ 0
SNCA-204ENST00000394989 ICE2Q659A1 982 aa15.08■□□□□ 0
SNCA-204ENST00000394989 FAM71AQ8IYT1 594 aa15.08■□□□□ 0
SNCA-204ENST00000394989 CTNNBL1Q8WYA6 563 aaPredicted RBP15.08■□□□□ 0
SNCA-204ENST00000394989 PBKQ96KB5 322 aa15.08■□□□□ 0
SNCA-204ENST00000394989 POLR3FQ9H1D9 316 aaPredicted RBP15.08■□□□□ 0
SNCA-204ENST00000394989 R3HDMLQ9H3Y0 253 aa15.08■□□□□ 0
SNCA-204ENST00000394989 ATP6V0A4Q9HBG4 840 aa15.08■□□□□ 0
SNCA-204ENST00000394989 NOCTQ9UK39 431 aaKnown RBP15.08■□□□□ 0
SNCA-204ENST00000394989 MAFBQ9Y5Q3 323 aaPredicted RBP15.08■□□□□ 0
SNCA-204ENST00000394989 ANKRD62A6NC57 917 aa15.07■□□□□ 0
SNCA-204ENST00000394989 CEP104O60308 925 aa15.07■□□□□ 0
SNCA-204ENST00000394989 DKC1O60832 514 aaKnown RBP eCLIP15.07■□□□□ 0
SNCA-204ENST00000394989 HEXIM1O94992 359 aaKnown RBP15.07■□□□□ 0
SNCA-204ENST00000394989 ATG7O95352 703 aa15.07■□□□□ 0
SNCA-204ENST00000394989 SGPL1O95470 568 aa15.07■□□□□ 0
SNCA-204ENST00000394989 CHRNB2P17787 502 aa15.07■□□□□ 0
SNCA-204ENST00000394989 ICAM3P32942 547 aa15.07■□□□□ 0
SNCA-204ENST00000394989 CARSP49589 748 aaKnown RBP15.07■□□□□ 0
SNCA-204ENST00000394989 STXBP2Q15833 593 aa15.07■□□□□ 0
SNCA-204ENST00000394989 HSP90B2PQ58FF3 399 aa15.07■□□□□ 0
SNCA-204ENST00000394989 KRT39Q6A163 491 aa15.07■□□□□ 0
SNCA-204ENST00000394989 MIS18BP1Q6P0N0 1132 aa15.07■□□□□ 0
SNCA-204ENST00000394989 SND1Q7KZF4 910 aaKnown RBP eCLIP15.07■□□□□ 0
SNCA-204ENST00000394989 ANKRD35Q8N283 1001 aa15.07■□□□□ 0
SNCA-204ENST00000394989 CHST13Q8NET6 341 aa15.07■□□□□ 0
SNCA-204ENST00000394989 DNERQ8NFT8 737 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms