RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 TRIM4Q9C037 500 aa11.04□□□□□ -0.64
COL4A6-203ENST00000394872 ZFYVE28Q9HCC9 887 aa11.04□□□□□ -0.64
COL4A6-203ENST00000394872 PP2D1A8MPX8 630 aa11.04□□□□□ -0.64
COL4A6-203ENST00000394872 DNAJC6O75061 913 aa11.04□□□□□ -0.64
COL4A6-203ENST00000394872 TADA2AO75478 443 aa11.04□□□□□ -0.64
COL4A6-203ENST00000394872 EFNA5P52803 228 aa11.04□□□□□ -0.64
COL4A6-203ENST00000394872 PRAMEP78395 509 aa11.04□□□□□ -0.64
COL4A6-203ENST00000394872 SPARCL1Q14515 664 aa11.04□□□□□ -0.64
COL4A6-203ENST00000394872 ACAD11Q709F0 780 aa11.04□□□□□ -0.64
COL4A6-203ENST00000394872 STAG2Q8N3U4 1231 aa11.04□□□□□ -0.64
COL4A6-203ENST00000394872 KATNAL1Q9BW62 490 aa11.04□□□□□ -0.64
COL4A6-203ENST00000394872 FTLP02792 175 aaPredicted RBP11.04□□□□□ -0.64
COL4A6-203ENST00000394872 CTSHP09668 335 aa11.04□□□□□ -0.64
COL4A6-203ENST00000394872 HDLBPQ00341 1268 aaKnown RBP11.04□□□□□ -0.64
COL4A6-203ENST00000394872 ZNF235Q14590 738 aa11.04□□□□□ -0.64
COL4A6-203ENST00000394872 EPHA7Q15375 998 aa11.04□□□□□ -0.64
COL4A6-203ENST00000394872 SMIM5Q71RC9 77 aa11.04□□□□□ -0.64
COL4A6-203ENST00000394872 PIP4K2CQ8TBX8 421 aa11.04□□□□□ -0.64
COL4A6-203ENST00000394872 SH3TC2Q8TF17 1288 aa11.04□□□□□ -0.64
COL4A6-203ENST00000394872 LZICQ8WZA0 190 aa11.04□□□□□ -0.64
COL4A6-203ENST00000394872 SYNDIG1LA6NDD5 238 aa11.03□□□□□ -0.64
COL4A6-203ENST00000394872 CYBBP04839 570 aa11.03□□□□□ -0.64
COL4A6-203ENST00000394872 RAPGEF5Q92565 580 aa11.03□□□□□ -0.64
COL4A6-203ENST00000394872 TNIP3Q96KP6 325 aa11.03□□□□□ -0.64
COL4A6-203ENST00000394872 PARK7Q99497 189 aaKnown RBP11.03□□□□□ -0.64
COL4A6-203ENST00000394872 EMSYQ7Z589 1322 aa11.03□□□□□ -0.64
COL4A6-203ENST00000394872 TRAPPC3O43617 180 aa11.03□□□□□ -0.64
COL4A6-203ENST00000394872 KITP10721 976 aa11.03□□□□□ -0.64
COL4A6-203ENST00000394872 CDK17Q00537 523 aa11.03□□□□□ -0.64
COL4A6-203ENST00000394872 KLHL38Q2WGJ6 581 aa11.03□□□□□ -0.64
COL4A6-203ENST00000394872 CDKL3Q8IVW4 592 aaPredicted RBP11.03□□□□□ -0.64
COL4A6-203ENST00000394872 TARBP1Q13395 1621 aaKnown RBP11.03□□□□□ -0.64
COL4A6-203ENST00000394872 NRKQ7Z2Y5 1582 aa11.03□□□□□ -0.64
COL4A6-203ENST00000394872 A0A0G2JND7 137 aa11.03□□□□□ -0.64
COL4A6-203ENST00000394872 ORC4O43929 436 aa11.03□□□□□ -0.64
COL4A6-203ENST00000394872 UPP2O95045 317 aa11.03□□□□□ -0.64
COL4A6-203ENST00000394872 STRIP1Q5VSL9 837 aa11.03□□□□□ -0.64
COL4A6-203ENST00000394872 ENOSF1Q7L5Y1 443 aa11.03□□□□□ -0.64
COL4A6-203ENST00000394872 WDR75Q8IWA0 830 aaKnown RBP11.03□□□□□ -0.64
COL4A6-203ENST00000394872 NEDD1Q8NHV4 660 aa11.03□□□□□ -0.64
COL4A6-203ENST00000394872 RMDN1Q96DB5 314 aa11.03□□□□□ -0.64
COL4A6-203ENST00000394872 THOC1Q96FV9 657 aaKnown RBP11.03□□□□□ -0.64
COL4A6-203ENST00000394872 MTIF3Q9H2K0 278 aaKnown RBP11.03□□□□□ -0.64
COL4A6-203ENST00000394872 SCARF1Q14162 830 aa11.03□□□□□ -0.64
COL4A6-203ENST00000394872 TRIM72Q6ZMU5 477 aa11.03□□□□□ -0.64
COL4A6-203ENST00000394872 PPP2R3CQ969Q6 453 aa11.03□□□□□ -0.64
COL4A6-203ENST00000394872 GOLPH3LQ9H4A5 285 aa11.03□□□□□ -0.64
COL4A6-203ENST00000394872 TUFT1Q9NNX1 390 aa11.03□□□□□ -0.64
COL4A6-203ENST00000394872 FGFR1OP2Q9NVK5 253 aa11.03□□□□□ -0.64
COL4A6-203ENST00000394872 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.03□□□□□ -0.64
COL4A6-203ENST00000394872 ZC3H4Q9UPT8 1303 aaKnown RBP11.03□□□□□ -0.64
COL4A6-203ENST00000394872 CCDC195A0A1B0GUA6 201 aa11.03□□□□□ -0.64
COL4A6-203ENST00000394872 PIK3R2O00459 728 aa11.03□□□□□ -0.64
COL4A6-203ENST00000394872 DYNC1LI2O43237 492 aaPredicted RBP11.03□□□□□ -0.64
COL4A6-203ENST00000394872 SULT1E1P49888 294 aa11.03□□□□□ -0.64
COL4A6-203ENST00000394872 CAV1Q03135 178 aa11.03□□□□□ -0.64
COL4A6-203ENST00000394872 TADA2BQ86TJ2 420 aa11.03□□□□□ -0.64
COL4A6-203ENST00000394872 PGBD4Q96DM1 585 aa11.03□□□□□ -0.64
COL4A6-203ENST00000394872 TRPV6Q9H1D0 765 aa11.03□□□□□ -0.64
COL4A6-203ENST00000394872 RASA4BC9J798 803 aa11.02□□□□□ -0.64
COL4A6-203ENST00000394872 CTIFO43310 598 aaKnown RBP11.02□□□□□ -0.64
COL4A6-203ENST00000394872 RASA4O43374 803 aa11.02□□□□□ -0.64
COL4A6-203ENST00000394872 BCAR1P56945 870 aa11.02□□□□□ -0.64
COL4A6-203ENST00000394872 ZNF211Q13398 564 aaPredicted RBP11.02□□□□□ -0.64
COL4A6-203ENST00000394872 THEMIS2Q5TEJ8 643 aa11.02□□□□□ -0.64
COL4A6-203ENST00000394872 NUGGCQ68CJ6 796 aa11.02□□□□□ -0.64
COL4A6-203ENST00000394872 HAUS6Q7Z4H7 955 aa11.02□□□□□ -0.64
COL4A6-203ENST00000394872 ZNF280CQ8ND82 737 aa11.02□□□□□ -0.64
COL4A6-203ENST00000394872 ZC3H15Q8WU90 426 aaKnown RBP11.02□□□□□ -0.64
COL4A6-203ENST00000394872 CRAMP1Q96RY5 1269 aa11.02□□□□□ -0.64
COL4A6-203ENST00000394872 TRIM55Q9BYV6 548 aa11.02□□□□□ -0.64
COL4A6-203ENST00000394872 OSBPL5Q9H0X9 879 aaPredicted RBP11.02□□□□□ -0.64
COL4A6-203ENST00000394872 ABCB6Q9NP58 842 aa11.02□□□□□ -0.64
COL4A6-203ENST00000394872 PARVAQ9NVD7 372 aa11.02□□□□□ -0.64
COL4A6-203ENST00000394872 PRPF4O43172 522 aaKnown RBP eCLIP11.02□□□□□ -0.64
COL4A6-203ENST00000394872 C6orf222P0C671 652 aaPredicted RBP11.02□□□□□ -0.64
COL4A6-203ENST00000394872 ATICP31939 592 aa11.02□□□□□ -0.64
COL4A6-203ENST00000394872 GPS1Q13098 491 aa11.02□□□□□ -0.64
COL4A6-203ENST00000394872 E2F5Q15329 346 aa11.02□□□□□ -0.64
COL4A6-203ENST00000394872 SMAD1Q15797 465 aaKnown RBP11.02□□□□□ -0.64
COL4A6-203ENST00000394872 COG4Q9H9E3 785 aa11.02□□□□□ -0.64
COL4A6-203ENST00000394872 APOBEC2Q9Y235 224 aaKnown RBP11.02□□□□□ -0.64
COL4A6-203ENST00000394872 JCADQ9P266 1359 aa11.02□□□□□ -0.65
COL4A6-203ENST00000394872 NPHP3-ACAD11A0A0J9YXS1 232 aa11.02□□□□□ -0.65
COL4A6-203ENST00000394872 ZFXP17010 805 aaPredicted RBP11.02□□□□□ -0.65
COL4A6-203ENST00000394872 ATP6V1E1P36543 226 aa11.02□□□□□ -0.65
COL4A6-203ENST00000394872 CASP8Q14790 479 aa11.02□□□□□ -0.65
COL4A6-203ENST00000394872 FSCBQ5H9T9 825 aa11.02□□□□□ -0.65
COL4A6-203ENST00000394872 AP1ARQ63HQ0 302 aa11.02□□□□□ -0.65
COL4A6-203ENST00000394872 LMBRD2Q68DH5 695 aaPredicted RBP11.02□□□□□ -0.65
COL4A6-203ENST00000394872 RNF135Q8IUD6 432 aa11.02□□□□□ -0.65
COL4A6-203ENST00000394872 SYT2Q8N9I0 419 aaPredicted RBP11.02□□□□□ -0.65
COL4A6-203ENST00000394872 PITPNM3Q9BZ71 974 aa11.02□□□□□ -0.65
COL4A6-203ENST00000394872 PPARGC1AQ9UBK2 798 aaKnown RBP11.02□□□□□ -0.65
COL4A6-203ENST00000394872 RFX7Q2KHR2 1363 aa11.02□□□□□ -0.65
COL4A6-203ENST00000394872 PLA2R1Q13018 1463 aa11.02□□□□□ -0.65
COL4A6-203ENST00000394872 CCDC151A5D8V7 595 aa11.02□□□□□ -0.65
COL4A6-203ENST00000394872 APOL1O14791 398 aa11.02□□□□□ -0.65
COL4A6-203ENST00000394872 GRIN3BO60391 1043 aa11.02□□□□□ -0.65
COL4A6-203ENST00000394872 ALDH1A1P00352 501 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms