RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 PHLDB2Q86SQ0 1253 aa12.51□□□□□ -0.41
UBE2D3-209ENST00000394804 MDM1Q8TC05 714 aa12.51□□□□□ -0.41
UBE2D3-209ENST00000394804 LRRC8CQ8TDW0 803 aa12.51□□□□□ -0.41
UBE2D3-209ENST00000394804 N4BP2L2Q92802 583 aaPredicted RBP12.51□□□□□ -0.41
UBE2D3-209ENST00000394804 ATP6V0A1Q93050 837 aa12.51□□□□□ -0.41
UBE2D3-209ENST00000394804 CEP170P1Q96L14 293 aa12.51□□□□□ -0.41
UBE2D3-209ENST00000394804 VCPKMTQ9H867 229 aa12.51□□□□□ -0.41
UBE2D3-209ENST00000394804 DDX4Q9NQI0 724 aaKnown RBP12.51□□□□□ -0.41
UBE2D3-209ENST00000394804 CYP26A1O43174 497 aa12.5□□□□□ -0.41
UBE2D3-209ENST00000394804 NOL4O94818 638 aa12.5□□□□□ -0.41
UBE2D3-209ENST00000394804 TROVE2P10155 538 aaKnown RBP eCLIP12.5□□□□□ -0.412e-9■□□□□ 10
UBE2D3-209ENST00000394804 ZNF131P52739 623 aa12.5□□□□□ -0.41
UBE2D3-209ENST00000394804 PTENP60484 403 aa12.5□□□□□ -0.41
UBE2D3-209ENST00000394804 ZCWPW2Q504Y3 356 aa12.5□□□□□ -0.41
UBE2D3-209ENST00000394804 HYIQ5T013 277 aa12.5□□□□□ -0.41
UBE2D3-209ENST00000394804 FLAD1Q8NFF5 587 aa12.5□□□□□ -0.41
UBE2D3-209ENST00000394804 CFAP57Q96MR6 1250 aa12.5□□□□□ -0.41
UBE2D3-209ENST00000394804 SMC6Q96SB8 1091 aa12.5□□□□□ -0.41
UBE2D3-209ENST00000394804 PCDHB4Q9Y5E5 795 aa12.5□□□□□ -0.41
UBE2D3-209ENST00000394804 PCK1P35558 622 aa12.5□□□□□ -0.41
UBE2D3-209ENST00000394804 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.5□□□□□ -0.41
UBE2D3-209ENST00000394804 AKT1S1Q96B36 256 aa12.5□□□□□ -0.41
UBE2D3-209ENST00000394804 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.5□□□□□ -0.41
UBE2D3-209ENST00000394804 UVRAGQ9P2Y5 699 aa12.5□□□□□ -0.41
UBE2D3-209ENST00000394804 CHD4Q14839 1912 aa12.5□□□□□ -0.41
UBE2D3-209ENST00000394804 EXOC1LA0A1B0GW35 172 aa12.5□□□□□ -0.41
UBE2D3-209ENST00000394804 CFAP73A6NFT4 308 aa12.5□□□□□ -0.41
UBE2D3-209ENST00000394804 FOXN3O00409 490 aaPredicted RBP12.5□□□□□ -0.41
UBE2D3-209ENST00000394804 ECE2O60344 883 aa12.5□□□□□ -0.41
UBE2D3-209ENST00000394804 BRAFP15056 766 aa12.5□□□□□ -0.41
UBE2D3-209ENST00000394804 EIF2AK2P19525 551 aaKnown RBP12.5□□□□□ -0.41
UBE2D3-209ENST00000394804 LRRC14Q15048 493 aa12.5□□□□□ -0.41
UBE2D3-209ENST00000394804 SUGP1Q8IWZ8 645 aaKnown RBP12.5□□□□□ -0.41
UBE2D3-209ENST00000394804 CCHCR1Q8TD31 782 aa12.5□□□□□ -0.41
UBE2D3-209ENST00000394804 C1orf54Q8WWF1 131 aa12.5□□□□□ -0.41
UBE2D3-209ENST00000394804 TNS1Q9HBL0 1735 aaKnown RBP12.49□□□□□ -0.41
UBE2D3-209ENST00000394804 P4HA2O15460 535 aa12.49□□□□□ -0.41
UBE2D3-209ENST00000394804 PHBP35232 272 aa12.49□□□□□ -0.41
UBE2D3-209ENST00000394804 KRT17Q04695 432 aa12.49□□□□□ -0.41
UBE2D3-209ENST00000394804 BRDTQ58F21 947 aaPredicted RBP12.49□□□□□ -0.41
UBE2D3-209ENST00000394804 TRMT10CQ7L0Y3 403 aaKnown RBP12.49□□□□□ -0.41
UBE2D3-209ENST00000394804 IRF2BP2Q7Z5L9 587 aa12.49□□□□□ -0.41
UBE2D3-209ENST00000394804 FBXO25Q8TCJ0 367 aa12.49□□□□□ -0.41
UBE2D3-209ENST00000394804 PRMT1Q99873 361 aaKnown RBP12.49□□□□□ -0.41
UBE2D3-209ENST00000394804 HSPBP1Q9NZL4 362 aa12.49□□□□□ -0.41
UBE2D3-209ENST00000394804 CD19P15391 556 aa12.49□□□□□ -0.41
UBE2D3-209ENST00000394804 ITGB3BPQ13352 177 aaPredicted RBP12.49□□□□□ -0.41
UBE2D3-209ENST00000394804 MTMR1Q13613 665 aa12.49□□□□□ -0.41
UBE2D3-209ENST00000394804 LMNTD2Q8IXW0 634 aa12.49□□□□□ -0.41
UBE2D3-209ENST00000394804 SNF8Q96H20 258 aa12.49□□□□□ -0.41
UBE2D3-209ENST00000394804 SGSM3Q96HU1 749 aa12.49□□□□□ -0.41
UBE2D3-209ENST00000394804 ZSWIM1Q9BR11 485 aa12.49□□□□□ -0.41
UBE2D3-209ENST00000394804 MLXIPLQ9NP71 852 aa12.49□□□□□ -0.41
UBE2D3-209ENST00000394804 HERC5Q9UII4 1024 aaKnown RBP12.49□□□□□ -0.41
UBE2D3-209ENST00000394804 NUP98P52948 1817 aa12.49□□□□□ -0.41
UBE2D3-209ENST00000394804 SRRM3A6NNA2 597 aaPredicted RBP12.49□□□□□ -0.41
UBE2D3-209ENST00000394804 CAND2O75155 1236 aa12.49□□□□□ -0.41
UBE2D3-209ENST00000394804 RASA3Q14644 834 aa12.49□□□□□ -0.41
UBE2D3-209ENST00000394804 PPP1R2P3Q6NXS1 205 aa12.49□□□□□ -0.41
UBE2D3-209ENST00000394804 SRRM1Q8IYB3 904 aaKnown RBP12.49□□□□□ -0.41
UBE2D3-209ENST00000394804 SCFD2Q8WU76 684 aa12.49□□□□□ -0.41
UBE2D3-209ENST00000394804 MAK16Q9BXY0 300 aaKnown RBP12.49□□□□□ -0.41
UBE2D3-209ENST00000394804 FGFBP2Q9BYJ0 223 aa12.49□□□□□ -0.41
UBE2D3-209ENST00000394804 TBC1D22BQ9NU19 505 aa12.49□□□□□ -0.41
UBE2D3-209ENST00000394804 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.49□□□□□ -0.41
UBE2D3-209ENST00000394804 CCT8L1PA6NM43 557 aa12.48□□□□□ -0.41
UBE2D3-209ENST00000394804 MMP10P09238 476 aa12.48□□□□□ -0.41
UBE2D3-209ENST00000394804 MXRA7P84157 204 aa12.48□□□□□ -0.41
UBE2D3-209ENST00000394804 TSNAXIP1Q2TAA8 658 aa12.48□□□□□ -0.41
UBE2D3-209ENST00000394804 ASTE1Q2TB18 679 aaPredicted RBP12.48□□□□□ -0.41
UBE2D3-209ENST00000394804 STRIP1Q5VSL9 837 aa12.48□□□□□ -0.41
UBE2D3-209ENST00000394804 LRRC15Q8TF66 581 aa12.48□□□□□ -0.41
UBE2D3-209ENST00000394804 SAAL1Q96ER3 474 aa12.48□□□□□ -0.41
UBE2D3-209ENST00000394804 PPP1R9AQ9ULJ8 1098 aa12.48□□□□□ -0.41
UBE2D3-209ENST00000394804 MYH10P35580 1976 aa12.48□□□□□ -0.41
UBE2D3-209ENST00000394804 FAM86B1E9PN63 330 aa12.48□□□□□ -0.41
UBE2D3-209ENST00000394804 FSBPO95073 299 aa12.48□□□□□ -0.41
UBE2D3-209ENST00000394804 FAM86B2P0C5J1 330 aa12.48□□□□□ -0.41
UBE2D3-209ENST00000394804 FBXL13Q8NEE6 735 aa12.48□□□□□ -0.41
UBE2D3-209ENST00000394804 STMN2Q93045 179 aa12.48□□□□□ -0.41
UBE2D3-209ENST00000394804 HEMGNQ9BXL5 484 aa12.48□□□□□ -0.41
UBE2D3-209ENST00000394804 TXLNGQ9NUQ3 528 aa12.48□□□□□ -0.41
UBE2D3-209ENST00000394804 SEPT9Q9UHD8 586 aaPredicted RBP12.48□□□□□ -0.41
UBE2D3-209ENST00000394804 FEM1BQ9UK73 627 aa12.48□□□□□ -0.41
UBE2D3-209ENST00000394804 LRRIQ4A6NIV6 560 aa12.48□□□□□ -0.41
UBE2D3-209ENST00000394804 SNHG28P0DPA3 235 aa12.48□□□□□ -0.41
UBE2D3-209ENST00000394804 KCNJ1P48048 391 aa12.48□□□□□ -0.41
UBE2D3-209ENST00000394804 JAK3P52333 1124 aa12.48□□□□□ -0.41
UBE2D3-209ENST00000394804 GNPTABQ3T906 1256 aa12.48□□□□□ -0.41
UBE2D3-209ENST00000394804 WDR78Q5VTH9 848 aa12.48□□□□□ -0.41
UBE2D3-209ENST00000394804 ZNF720Q7Z2F6 126 aa12.48□□□□□ -0.41
UBE2D3-209ENST00000394804 LDHDQ86WU2 507 aa12.48□□□□□ -0.41
UBE2D3-209ENST00000394804 MICAL1Q8TDZ2 1067 aa12.48□□□□□ -0.41
UBE2D3-209ENST00000394804 C18orf8Q96DM3 657 aa12.48□□□□□ -0.41
UBE2D3-209ENST00000394804 GMCL1Q96IK5 515 aa12.48□□□□□ -0.41
UBE2D3-209ENST00000394804 CYP3A7-CYP3A51PA0A087WV96 503 aa12.48□□□□□ -0.41
UBE2D3-209ENST00000394804 DENND3A2RUS2 1198 aa12.48□□□□□ -0.41
UBE2D3-209ENST00000394804 WDR64B1ANS9 1081 aa12.48□□□□□ -0.41
UBE2D3-209ENST00000394804 CLDN3O15551 220 aa12.48□□□□□ -0.41
UBE2D3-209ENST00000394804 CYP3A7P24462 503 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms