RNA–Protein interactions for RNA: ENST00000394154.2

VTI1BP2-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 2, humanhuman

BASIC

Gene VTI1BP2, Length 696 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP2-201ENST00000394154 ARHGEF3Q9NR81 526 aa12.32□□□□□ -0.44
VTI1BP2-201ENST00000394154 DDX19AQ9NUU7 478 aaKnown RBP12.32□□□□□ -0.44
VTI1BP2-201ENST00000394154 FAM13BQ9NYF5 915 aa12.32□□□□□ -0.44
VTI1BP2-201ENST00000394154 FBXO2Q9UK22 296 aaPredicted RBP12.32□□□□□ -0.44
VTI1BP2-201ENST00000394154 GMEB2Q9UKD1 530 aa12.32□□□□□ -0.44
VTI1BP2-201ENST00000394154 TELO2Q9Y4R8 837 aa12.32□□□□□ -0.44
VTI1BP2-201ENST00000394154 MIA3Q5JRA6 1907 aa12.31□□□□□ -0.44
VTI1BP2-201ENST00000394154 SPDYE4A6NLX3 237 aa12.31□□□□□ -0.44
VTI1BP2-201ENST00000394154 HOXA2O43364 376 aa12.31□□□□□ -0.44
VTI1BP2-201ENST00000394154 LAMTOR5O43504 91 aa12.31□□□□□ -0.44
VTI1BP2-201ENST00000394154 LETM1O95202 739 aaPredicted RBP12.31□□□□□ -0.44
VTI1BP2-201ENST00000394154 CXCL14O95715 111 aa12.31□□□□□ -0.44
VTI1BP2-201ENST00000394154 ZNF76P36508 570 aa12.31□□□□□ -0.44
VTI1BP2-201ENST00000394154 SREBF1P36956 1147 aa12.31□□□□□ -0.44
VTI1BP2-201ENST00000394154 PBX3P40426 434 aa12.31□□□□□ -0.44
VTI1BP2-201ENST00000394154 PRPHP41219 470 aa12.31□□□□□ -0.44
VTI1BP2-201ENST00000394154 MRPS9P82933 396 aaKnown RBP12.31□□□□□ -0.44
VTI1BP2-201ENST00000394154 SHC2P98077 582 aa12.31□□□□□ -0.44
VTI1BP2-201ENST00000394154 KRT76Q01546 638 aa12.31□□□□□ -0.44
VTI1BP2-201ENST00000394154 FAM160A1Q05DH4 1040 aa12.31□□□□□ -0.44
VTI1BP2-201ENST00000394154 GIT2Q14161 759 aa12.31□□□□□ -0.44
VTI1BP2-201ENST00000394154 CCDC183Q5T5S1 534 aa12.31□□□□□ -0.44
VTI1BP2-201ENST00000394154 RESP18Q5W5W9 173 aa12.31□□□□□ -0.44
VTI1BP2-201ENST00000394154 MOXD1Q6UVY6 613 aa12.31□□□□□ -0.44
VTI1BP2-201ENST00000394154 DTHD1Q6ZMT9 781 aa12.31□□□□□ -0.44
VTI1BP2-201ENST00000394154 SLC44A3Q8N4M1 653 aa12.31□□□□□ -0.44
VTI1BP2-201ENST00000394154 GPR152Q8TDT2 470 aa12.31□□□□□ -0.44
VTI1BP2-201ENST00000394154 SLC22A17Q8WUG5 538 aa12.31□□□□□ -0.44
VTI1BP2-201ENST00000394154 NXPE3Q969Y0 559 aa12.31□□□□□ -0.44
VTI1BP2-201ENST00000394154 CLIC6Q96NY7 704 aa12.31□□□□□ -0.44
VTI1BP2-201ENST00000394154 PATJQ8NI35 1801 aa12.31□□□□□ -0.44
VTI1BP2-201ENST00000394154 C2orf16Q68DN1 1984 aa12.3□□□□□ -0.44
VTI1BP2-201ENST00000394154 CYP3A7-CYP3A51PA0A087WV96 503 aa12.3□□□□□ -0.44
VTI1BP2-201ENST00000394154 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.3□□□□□ -0.44
VTI1BP2-201ENST00000394154 A0A1B0GVL5 298 aa12.3□□□□□ -0.44
VTI1BP2-201ENST00000394154 MARCH6O60337 910 aa12.3□□□□□ -0.44
VTI1BP2-201ENST00000394154 TBC1D4O60343 1298 aa12.3□□□□□ -0.44
VTI1BP2-201ENST00000394154 CYP3A4P08684 503 aa12.3□□□□□ -0.44
VTI1BP2-201ENST00000394154 OR52Z1P0C646 297 aa12.3□□□□□ -0.44
VTI1BP2-201ENST00000394154 GLULP15104 373 aa12.3□□□□□ -0.44
VTI1BP2-201ENST00000394154 CYP3A7P24462 503 aa12.3□□□□□ -0.44
VTI1BP2-201ENST00000394154 LONP1P36776 959 aaKnown RBP12.3□□□□□ -0.44
VTI1BP2-201ENST00000394154 CALCRLQ16602 461 aa12.3□□□□□ -0.44
VTI1BP2-201ENST00000394154 DCLRE1AQ6PJP8 1040 aa12.3□□□□□ -0.44
VTI1BP2-201ENST00000394154 C15orf39Q6ZRI6 1047 aa12.3□□□□□ -0.44
VTI1BP2-201ENST00000394154 LRRC55Q6ZSA7 311 aa12.3□□□□□ -0.44
VTI1BP2-201ENST00000394154 PPFIBP1Q86W92 1011 aa12.3□□□□□ -0.44
VTI1BP2-201ENST00000394154 ABI1Q8IZP0 508 aa12.3□□□□□ -0.44
VTI1BP2-201ENST00000394154 SLC39A11Q8N1S5 342 aa12.3□□□□□ -0.44
VTI1BP2-201ENST00000394154 NME8Q8N427 588 aa12.3□□□□□ -0.44
VTI1BP2-201ENST00000394154 ZBTB44Q8NCP5 570 aa12.3□□□□□ -0.44
VTI1BP2-201ENST00000394154 RSAD2Q8WXG1 361 aa12.3□□□□□ -0.44
VTI1BP2-201ENST00000394154 DDX1Q92499 740 aaKnown RBP12.3□□□□□ -0.44
VTI1BP2-201ENST00000394154 ZBTB10Q96DT7 871 aa12.3□□□□□ -0.44
VTI1BP2-201ENST00000394154 CASD1Q96PB1 797 aa12.3□□□□□ -0.44
VTI1BP2-201ENST00000394154 SMARCAD1Q9H4L7 1026 aa12.3□□□□□ -0.44
VTI1BP2-201ENST00000394154 PARD6AQ9NPB6 346 aa12.3□□□□□ -0.44
VTI1BP2-201ENST00000394154 SPATA6Q9NWH7 488 aaPredicted RBP12.3□□□□□ -0.44
VTI1BP2-201ENST00000394154 ZSCAN32Q9NX65 697 aa12.3□□□□□ -0.44
VTI1BP2-201ENST00000394154 DACT1Q9NYF0 836 aa12.3□□□□□ -0.44
VTI1BP2-201ENST00000394154 TMEM63CQ9P1W3 806 aa12.3□□□□□ -0.44
VTI1BP2-201ENST00000394154 DDX25Q9UHL0 483 aaKnown RBP12.3□□□□□ -0.44
VTI1BP2-201ENST00000394154 PCDHA2Q9Y5H9 948 aa12.3□□□□□ -0.44
VTI1BP2-201ENST00000394154 IRAK3Q9Y616 596 aa12.3□□□□□ -0.44
VTI1BP2-201ENST00000394154 FRMPD4Q14CM0 1322 aa12.3□□□□□ -0.44
VTI1BP2-201ENST00000394154 FAM237AA0A1B0GTK4 181 aa12.29□□□□□ -0.44
VTI1BP2-201ENST00000394154 VWA3AA6NCI4 1184 aa12.29□□□□□ -0.44
VTI1BP2-201ENST00000394154 SOBPA7XYQ1 873 aa12.29□□□□□ -0.44
VTI1BP2-201ENST00000394154 LILRB5O75023 590 aa12.29□□□□□ -0.44
VTI1BP2-201ENST00000394154 NR1I2O75469 434 aa12.29□□□□□ -0.44
VTI1BP2-201ENST00000394154 RPS6KA5O75582 802 aa12.29□□□□□ -0.44
VTI1BP2-201ENST00000394154 TDP2O95551 362 aa12.29□□□□□ -0.44
VTI1BP2-201ENST00000394154 PROS1P07225 676 aa12.29□□□□□ -0.44
VTI1BP2-201ENST00000394154 PFKFB1P16118 471 aa12.29□□□□□ -0.44
VTI1BP2-201ENST00000394154 PMLP29590 882 aa12.29□□□□□ -0.44
VTI1BP2-201ENST00000394154 CIITAP33076 1130 aa12.29□□□□□ -0.44
VTI1BP2-201ENST00000394154 SYKP43405 635 aa12.29□□□□□ -0.44
VTI1BP2-201ENST00000394154 NDUFA8P51970 172 aa12.29□□□□□ -0.44
VTI1BP2-201ENST00000394154 FAM189BP81408 668 aa12.29□□□□□ -0.44
VTI1BP2-201ENST00000394154 CSTF1Q05048 431 aaKnown RBP12.29□□□□□ -0.44
VTI1BP2-201ENST00000394154 PTPN14Q15678 1187 aa12.29□□□□□ -0.44
VTI1BP2-201ENST00000394154 SHC4Q6S5L8 630 aa12.29□□□□□ -0.44
VTI1BP2-201ENST00000394154 SEPT1Q8WYJ6 367 aa12.29□□□□□ -0.44
VTI1BP2-201ENST00000394154 SHDQ96IW2 340 aa12.29□□□□□ -0.44
VTI1BP2-201ENST00000394154 BCO2Q9BYV7 579 aa12.29□□□□□ -0.44
VTI1BP2-201ENST00000394154 FOXQ1Q9C009 403 aa12.29□□□□□ -0.44
VTI1BP2-201ENST00000394154 CSRNP2Q9H175 543 aa12.29□□□□□ -0.44
VTI1BP2-201ENST00000394154 TMEM60Q9H2L4 133 aa12.29□□□□□ -0.44
VTI1BP2-201ENST00000394154 GOLPH3LQ9H4A5 285 aa12.29□□□□□ -0.44
VTI1BP2-201ENST00000394154 SPEGQ15772 3267 aa12.29□□□□□ -0.44
VTI1BP2-201ENST00000394154 FRYQ5TBA9 3013 aa12.28□□□□□ -0.44
VTI1BP2-201ENST00000394154 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.28□□□□□ -0.44
VTI1BP2-201ENST00000394154 SMIM35A0A1B0GVV1 85 aa12.28□□□□□ -0.44
VTI1BP2-201ENST00000394154 GPR182O15218 404 aa12.28□□□□□ -0.44
VTI1BP2-201ENST00000394154 EDIL3O43854 480 aa12.28□□□□□ -0.44
VTI1BP2-201ENST00000394154 INSRRP14616 1297 aa12.28□□□□□ -0.44
VTI1BP2-201ENST00000394154 GBP2P32456 591 aaPredicted RBP12.28□□□□□ -0.44
VTI1BP2-201ENST00000394154 TXLNAP40222 546 aa12.28□□□□□ -0.44
VTI1BP2-201ENST00000394154 STARD6P59095 220 aa12.28□□□□□ -0.44
VTI1BP2-201ENST00000394154 Q4G0T1 1027 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms