RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 CD2APQ9Y5K6 639 aa7.78□□□□□ -1.16
SMAD1-202ENST00000394092 ZNFX1Q9P2E3 1918 aaKnown RBP7.78□□□□□ -1.16
SMAD1-202ENST00000394092 SYNGAP1Q96PV0 1343 aa7.78□□□□□ -1.16
SMAD1-202ENST00000394092 DENND3A2RUS2 1198 aa7.77□□□□□ -1.17
SMAD1-202ENST00000394092 GOLGA6CA6NDK9 693 aa7.77□□□□□ -1.17
SMAD1-202ENST00000394092 MIF4GDA9UHW6 222 aaKnown RBP7.77□□□□□ -1.17
SMAD1-202ENST00000394092 ATP9AO75110 1047 aa7.77□□□□□ -1.17
SMAD1-202ENST00000394092 LRRN2O75325 713 aa7.77□□□□□ -1.17
SMAD1-202ENST00000394092 ZBTB7AO95365 584 aa7.77□□□□□ -1.17
SMAD1-202ENST00000394092 SYF2O95926 243 aaKnown RBP7.77□□□□□ -1.17
SMAD1-202ENST00000394092 CCNE2O96020 404 aa7.77□□□□□ -1.17
SMAD1-202ENST00000394092 EGFRP00533 1210 aa7.77□□□□□ -1.17
SMAD1-202ENST00000394092 IVLP07476 585 aa7.77□□□□□ -1.17
SMAD1-202ENST00000394092 GOLGA6DP0CG33 693 aa7.77□□□□□ -1.17
SMAD1-202ENST00000394092 KCNA2P16389 499 aa7.77□□□□□ -1.17
SMAD1-202ENST00000394092 HSPA6P17066 643 aa7.77□□□□□ -1.17
SMAD1-202ENST00000394092 CAPN2P17655 700 aa7.77□□□□□ -1.17
SMAD1-202ENST00000394092 GARTP22102 1010 aa7.77□□□□□ -1.17
SMAD1-202ENST00000394092 GGCXP38435 758 aa7.77□□□□□ -1.17
SMAD1-202ENST00000394092 NPTX2P47972 431 aa7.77□□□□□ -1.17
SMAD1-202ENST00000394092 GCLMP48507 274 aa7.77□□□□□ -1.17
SMAD1-202ENST00000394092 HMGCS2P54868 508 aa7.77□□□□□ -1.17
SMAD1-202ENST00000394092 GUCY2DQ02846 1103 aa7.77□□□□□ -1.17
SMAD1-202ENST00000394092 PPP3CAQ08209 521 aa7.77□□□□□ -1.17
SMAD1-202ENST00000394092 TCEAL1Q15170 157 aa7.77□□□□□ -1.17
SMAD1-202ENST00000394092 SUPT20HL1Q3ZLR7 823 aa7.77□□□□□ -1.17
SMAD1-202ENST00000394092 PLA2G4FQ68DD2 849 aa7.77□□□□□ -1.17
SMAD1-202ENST00000394092 PHLDB3Q6NSJ2 640 aa7.77□□□□□ -1.17
SMAD1-202ENST00000394092 C11orf63Q6NUN7 778 aa7.77□□□□□ -1.17
SMAD1-202ENST00000394092 ENOSF1Q7L5Y1 443 aa7.77□□□□□ -1.17
SMAD1-202ENST00000394092 METTL13Q8N6R0 699 aa7.77□□□□□ -1.17
SMAD1-202ENST00000394092 UBL4BQ8N7F7 174 aa7.77□□□□□ -1.17
SMAD1-202ENST00000394092 TMEM161BQ8NDZ6 487 aa7.77□□□□□ -1.17
SMAD1-202ENST00000394092 FAM76AQ8TAV0 307 aa7.77□□□□□ -1.17
SMAD1-202ENST00000394092 SLC35G2Q8TBE7 412 aa7.77□□□□□ -1.17
SMAD1-202ENST00000394092 SCFD2Q8WU76 684 aa7.77□□□□□ -1.17
SMAD1-202ENST00000394092 HDAC7Q8WUI4 952 aa7.77□□□□□ -1.17
SMAD1-202ENST00000394092 CEP170P1Q96L14 293 aa7.77□□□□□ -1.17
SMAD1-202ENST00000394092 NT5C1BQ96P26 610 aa7.77□□□□□ -1.17
SMAD1-202ENST00000394092 TMEM117Q9H0C3 514 aa7.77□□□□□ -1.17
SMAD1-202ENST00000394092 CARD9Q9H257 536 aa7.77□□□□□ -1.17
SMAD1-202ENST00000394092 TAF1DQ9H5J8 278 aaPredicted RBP7.77□□□□□ -1.17
SMAD1-202ENST00000394092 KIAA1586Q9HCI6 787 aa7.77□□□□□ -1.17
SMAD1-202ENST00000394092 EPB41L5Q9HCM4 733 aa7.77□□□□□ -1.17
SMAD1-202ENST00000394092 TMEM8AQ9HCN3 771 aa7.77□□□□□ -1.17
SMAD1-202ENST00000394092 GOLGA6AQ9NYA3 693 aa7.77□□□□□ -1.17
SMAD1-202ENST00000394092 HOXC10Q9NYD6 342 aa7.77□□□□□ -1.17
SMAD1-202ENST00000394092 GABBR1Q9UBS5 961 aa7.77□□□□□ -1.17
SMAD1-202ENST00000394092 SLC9A2Q9UBY0 812 aa7.77□□□□□ -1.17
SMAD1-202ENST00000394092 ZNF214Q9UL59 606 aaPredicted RBP7.77□□□□□ -1.17
SMAD1-202ENST00000394092 STXBP5LQ9Y2K9 1186 aa7.77□□□□□ -1.17
SMAD1-202ENST00000394092 ZC3H4Q9UPT8 1303 aaKnown RBP7.77□□□□□ -1.17
SMAD1-202ENST00000394092 FOXN3O00409 490 aaPredicted RBP7.76□□□□□ -1.17
SMAD1-202ENST00000394092 KRIT1O00522 736 aa7.76□□□□□ -1.17
SMAD1-202ENST00000394092 RAD51CO43502 376 aa7.76□□□□□ -1.17
SMAD1-202ENST00000394092 BUB1BO60566 1050 aaPredicted RBP7.76□□□□□ -1.17
SMAD1-202ENST00000394092 ZC3H11AO75152 810 aaKnown RBP eCLIP7.76□□□□□ -1.17
SMAD1-202ENST00000394092 PHACTR2O75167 634 aa7.76□□□□□ -1.17
SMAD1-202ENST00000394092 RTN2O75298 545 aa7.76□□□□□ -1.17
SMAD1-202ENST00000394092 GZMAP12544 262 aa7.76□□□□□ -1.17
SMAD1-202ENST00000394092 ABCB4P21439 1286 aa7.76□□□□□ -1.17
SMAD1-202ENST00000394092 CNGA1P29973 690 aa7.76□□□□□ -1.17
SMAD1-202ENST00000394092 ACTN2P35609 894 aa7.76□□□□□ -1.17
SMAD1-202ENST00000394092 PDE6CP51160 858 aa7.76□□□□□ -1.17
SMAD1-202ENST00000394092 GPC3P51654 580 aa7.76□□□□□ -1.17
SMAD1-202ENST00000394092 DLG4P78352 724 aa7.76□□□□□ -1.17
SMAD1-202ENST00000394092 DGKZQ13574 1117 aa7.76□□□□□ -1.17
SMAD1-202ENST00000394092 BRDTQ58F21 947 aaPredicted RBP7.76□□□□□ -1.17
SMAD1-202ENST00000394092 XKR3Q5GH77 459 aa7.76□□□□□ -1.17
SMAD1-202ENST00000394092 CFAP58Q5T655 872 aa7.76□□□□□ -1.17
SMAD1-202ENST00000394092 ANGEL2Q5VTE6 544 aaKnown RBP7.76□□□□□ -1.17
SMAD1-202ENST00000394092 CATSPERGQ6ZRH7 1159 aa7.76□□□□□ -1.17
SMAD1-202ENST00000394092 ANO5Q75V66 913 aa7.76□□□□□ -1.17
SMAD1-202ENST00000394092 CCDC125Q86Z20 511 aa7.76□□□□□ -1.17
SMAD1-202ENST00000394092 KLHL7Q8IXQ5 586 aa7.76□□□□□ -1.17
SMAD1-202ENST00000394092 GPD1LQ8N335 351 aa7.76□□□□□ -1.17
SMAD1-202ENST00000394092 PPM1KQ8N3J5 372 aa7.76□□□□□ -1.17
SMAD1-202ENST00000394092 CHST13Q8NET6 341 aa7.76□□□□□ -1.17
SMAD1-202ENST00000394092 DNERQ8NFT8 737 aa7.76□□□□□ -1.17
SMAD1-202ENST00000394092 POMGNT1Q8WZA1 660 aa7.76□□□□□ -1.17
SMAD1-202ENST00000394092 LRRC45Q96CN5 670 aa7.76□□□□□ -1.17
SMAD1-202ENST00000394092 BICD1Q96G01 975 aa7.76□□□□□ -1.17
SMAD1-202ENST00000394092 FBXL18Q96ME1 805 aa7.76□□□□□ -1.17
SMAD1-202ENST00000394092 SH3GL2Q99962 352 aa7.76□□□□□ -1.17
SMAD1-202ENST00000394092 NTPCRQ9BSD7 190 aaKnown RBP7.76□□□□□ -1.17
SMAD1-202ENST00000394092 ISCUQ9H1K1 167 aa7.76□□□□□ -1.17
SMAD1-202ENST00000394092 GPRC5CQ9NQ84 441 aa7.76□□□□□ -1.17
SMAD1-202ENST00000394092 CYP39A1Q9NYL5 469 aa7.76□□□□□ -1.17
SMAD1-202ENST00000394092 FBXO40Q9UH90 709 aa7.76□□□□□ -1.17
SMAD1-202ENST00000394092 SEPT9Q9UHD8 586 aaPredicted RBP7.76□□□□□ -1.17
SMAD1-202ENST00000394092 SCAF8Q9UPN6 1271 aaKnown RBP7.76□□□□□ -1.17
SMAD1-202ENST00000394092 COQ4Q9Y3A0 265 aa7.76□□□□□ -1.17
SMAD1-202ENST00000394092 SSC5DA1L4H1 1573 aa7.76□□□□□ -1.17
SMAD1-202ENST00000394092 GOLGA6L10A6NI86 522 aa7.76□□□□□ -1.17
SMAD1-202ENST00000394092 HNRNPDLO14979 420 aaKnown RBP7.76□□□□□ -1.17
SMAD1-202ENST00000394092 RPS6KA5O75582 802 aa7.76□□□□□ -1.17
SMAD1-202ENST00000394092 MTA2O94776 668 aa7.76□□□□□ -1.17
SMAD1-202ENST00000394092 GGPS1O95749 300 aa7.76□□□□□ -1.17
SMAD1-202ENST00000394092 ADRB2P07550 413 aa7.76□□□□□ -1.17
SMAD1-202ENST00000394092 GLI1P08151 1106 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms