RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 TMEM174Q8WUU8 243 aa26.54■■□□□ 1.84
LRFN4-202ENST00000393952 TMEM40Q8WWA1 233 aa26.54■■□□□ 1.84
LRFN4-202ENST00000393952 IFNKQ9P0W0 207 aa26.54■■□□□ 1.84
LRFN4-202ENST00000393952 ANKFY1Q9P2R3 1169 aa26.54■■□□□ 1.84
LRFN4-202ENST00000393952 STYXL1Q9Y6J8 313 aa26.54■■□□□ 1.84
LRFN4-202ENST00000393952 RBAK-RBAKDNI3L0D1 243 aa26.54■■□□□ 1.84
LRFN4-202ENST00000393952 M0QZ92 97 aa26.54■■□□□ 1.84
LRFN4-202ENST00000393952 EXOC3O60645 756 aa26.54■■□□□ 1.84
LRFN4-202ENST00000393952 EIF4BP23588 611 aaKnown RBP26.54■■□□□ 1.84
LRFN4-202ENST00000393952 PRIMPOLQ96LW4 560 aa26.54■■□□□ 1.84
LRFN4-202ENST00000393952 TMEM106CQ9BVX2 250 aa26.54■■□□□ 1.84
LRFN4-202ENST00000393952 TRIM5Q9C035 493 aa26.54■■□□□ 1.84
LRFN4-202ENST00000393952 HAPLN2Q9GZV7 340 aa26.54■■□□□ 1.84
LRFN4-202ENST00000393952 TAB2Q9NYJ8 693 aa26.54■■□□□ 1.84
LRFN4-202ENST00000393952 CNTNAP2Q9UHC6 1331 aa26.53■■□□□ 1.84
LRFN4-202ENST00000393952 SLC16A3O15427 465 aaKnown RBP26.53■■□□□ 1.84
LRFN4-202ENST00000393952 GNA14O95837 355 aa26.53■■□□□ 1.84
LRFN4-202ENST00000393952 CHRNA1P02708 482 aa26.53■■□□□ 1.84
LRFN4-202ENST00000393952 MTIF2P46199 727 aaKnown RBP26.53■■□□□ 1.84
LRFN4-202ENST00000393952 ATN1P54259 1190 aaPredicted RBP26.53■■□□□ 1.84
LRFN4-202ENST00000393952 MGAT3Q09327 533 aa26.53■■□□□ 1.84
LRFN4-202ENST00000393952 TMEM132AQ24JP5 1023 aa26.53■■□□□ 1.84
LRFN4-202ENST00000393952 ATF7IP2Q5U623 682 aa26.53■■□□□ 1.84
LRFN4-202ENST00000393952 TSHZ1Q6ZSZ6 1077 aa26.53■■□□□ 1.84
LRFN4-202ENST00000393952 FAM126BQ8IXS8 530 aa26.53■■□□□ 1.84
LRFN4-202ENST00000393952 ANKLE1Q8NAG6 615 aa26.53■■□□□ 1.84
LRFN4-202ENST00000393952 XXYLT1Q8NBI6 393 aa26.53■■□□□ 1.84
LRFN4-202ENST00000393952 ANKRD20A12PQ8NF67 263 aa26.53■■□□□ 1.84
LRFN4-202ENST00000393952 SAAL1Q96ER3 474 aa26.53■■□□□ 1.84
LRFN4-202ENST00000393952 GOLGA8IPA6NC78 632 aa26.52■■□□□ 1.84
LRFN4-202ENST00000393952 GOLGA8JA6NMD2 632 aa26.52■■□□□ 1.84
LRFN4-202ENST00000393952 TSPAN1O60635 241 aa26.52■■□□□ 1.84
LRFN4-202ENST00000393952 TOM1L1O75674 476 aa26.52■■□□□ 1.84
LRFN4-202ENST00000393952 ERLIN2O94905 339 aa26.52■■□□□ 1.84
LRFN4-202ENST00000393952 COL6A1P12109 1028 aa26.52■■□□□ 1.84
LRFN4-202ENST00000393952 MATR3P43243 847 aaKnown RBP eCLIP26.52■■□□□ 1.84
LRFN4-202ENST00000393952 SLFN12LQ6IEE8 588 aa26.52■■□□□ 1.84
LRFN4-202ENST00000393952 CATSPER4Q7RTX7 472 aa26.52■■□□□ 1.84
LRFN4-202ENST00000393952 NAP1L5Q96NT1 182 aaPredicted RBP26.52■■□□□ 1.84
LRFN4-202ENST00000393952 FRMD4BQ9Y2L6 1034 aa26.52■■□□□ 1.84
LRFN4-202ENST00000393952 A0A0B4J269 797 aa26.51■■□□□ 1.83
LRFN4-202ENST00000393952 ADCY5O95622 1261 aa26.51■■□□□ 1.83
LRFN4-202ENST00000393952 EPB41P11171 864 aaKnown RBP26.51■■□□□ 1.83
LRFN4-202ENST00000393952 ARF4P18085 180 aaPredicted RBP26.51■■□□□ 1.83
LRFN4-202ENST00000393952 PSMC2P35998 433 aaKnown RBP26.51■■□□□ 1.83
LRFN4-202ENST00000393952 COPB1P53618 953 aaKnown RBP26.51■■□□□ 1.83
LRFN4-202ENST00000393952 EEF1DP3Q658K8 133 aa26.51■■□□□ 1.83
LRFN4-202ENST00000393952 SLC39A5Q6ZMH5 540 aa26.51■■□□□ 1.83
LRFN4-202ENST00000393952 CDR2LQ86X02 465 aaPredicted RBP26.51■■□□□ 1.83
LRFN4-202ENST00000393952 FAM186BQ8IYM0 893 aa26.51■■□□□ 1.83
LRFN4-202ENST00000393952 CPB2Q96IY4 423 aa26.51■■□□□ 1.83
LRFN4-202ENST00000393952 MKNK1Q9BUB5 465 aa26.51■■□□□ 1.83
LRFN4-202ENST00000393952 XPO4Q9C0E2 1151 aaKnown RBP26.51■■□□□ 1.83
LRFN4-202ENST00000393952 ABLIM1O14639 778 aa26.5■■□□□ 1.83
LRFN4-202ENST00000393952 HARSP12081 509 aaKnown RBP26.5■■□□□ 1.83
LRFN4-202ENST00000393952 PROZP22891 400 aa26.5■■□□□ 1.83
LRFN4-202ENST00000393952 ZNF75DP51815 510 aa26.5■■□□□ 1.83
LRFN4-202ENST00000393952 MARSP56192 900 aaKnown RBP26.5■■□□□ 1.83
LRFN4-202ENST00000393952 UBASH3AP57075 661 aa26.5■■□□□ 1.83
LRFN4-202ENST00000393952 FRMD5Q7Z6J6 570 aa26.5■■□□□ 1.83
LRFN4-202ENST00000393952 ZBTB33Q86T24 672 aa26.5■■□□□ 1.83
LRFN4-202ENST00000393952 RDH13Q8NBN7 331 aa26.5■■□□□ 1.83
LRFN4-202ENST00000393952 TUBGCP2Q9BSJ2 902 aa26.5■■□□□ 1.83
LRFN4-202ENST00000393952 TCHPQ9BT92 498 aa26.5■■□□□ 1.83
LRFN4-202ENST00000393952 MSTO1Q9BUK6 570 aa26.5■■□□□ 1.83
LRFN4-202ENST00000393952 VPS16Q9H269 839 aa26.5■■□□□ 1.83
LRFN4-202ENST00000393952 PTPRHQ9HD43 1115 aa26.5■■□□□ 1.83
LRFN4-202ENST00000393952 TNFSF13BQ9Y275 285 aa26.5■■□□□ 1.83
LRFN4-202ENST00000393952 LRRC10BA6NIK2 292 aa26.5■■□□□ 1.83
LRFN4-202ENST00000393952 CLDN3O15551 220 aa26.5■■□□□ 1.83
LRFN4-202ENST00000393952 CD4P01730 458 aa26.5■■□□□ 1.83
LRFN4-202ENST00000393952 SFPQP23246 707 aaKnown RBP eCLIP26.5■■□□□ 1.83
LRFN4-202ENST00000393952 MPZL3Q6UWV2 235 aa26.5■■□□□ 1.83
LRFN4-202ENST00000393952 PDZD7Q9H5P4 517 aa26.5■■□□□ 1.83
LRFN4-202ENST00000393952 ARMCX3Q9UH62 379 aaPredicted RBP26.5■■□□□ 1.83
LRFN4-202ENST00000393952 AGO2Q9UKV8 859 aaKnown RBP26.5■■□□□ 1.83
LRFN4-202ENST00000393952 NOC2LQ9Y3T9 749 aaKnown RBP26.5■■□□□ 1.83
LRFN4-202ENST00000393952 PQBP1O60828 265 aaKnown RBP26.49■■□□□ 1.83
LRFN4-202ENST00000393952 PRKCSHP14314 528 aaPredicted RBP26.49■■□□□ 1.83
LRFN4-202ENST00000393952 CBWD2Q8IUF1 395 aa26.49■■□□□ 1.83
LRFN4-202ENST00000393952 TRIM59Q8IWR1 403 aa26.49■■□□□ 1.83
LRFN4-202ENST00000393952 BORCS6Q96GS4 357 aa26.49■■□□□ 1.83
LRFN4-202ENST00000393952 FBXL18Q96ME1 805 aa26.49■■□□□ 1.83
LRFN4-202ENST00000393952 INTS13Q9NVM9 706 aa26.49■■□□□ 1.83
LRFN4-202ENST00000393952 A0A1B0GTH6 734 aa26.48■■□□□ 1.83
LRFN4-202ENST00000393952 CAND2O75155 1236 aa26.48■■□□□ 1.83
LRFN4-202ENST00000393952 ADRB2P07550 413 aa26.48■■□□□ 1.83
LRFN4-202ENST00000393952 CKBP12277 381 aa26.48■■□□□ 1.83
LRFN4-202ENST00000393952 MCL1Q07820 350 aa26.48■■□□□ 1.83
LRFN4-202ENST00000393952 NOLC1Q14978 699 aaKnown RBP eCLIP26.48■■□□□ 1.83
LRFN4-202ENST00000393952 PCBP1Q15365 356 aaKnown RBP eCLIP26.48■■□□□ 1.83
LRFN4-202ENST00000393952 ZNF568Q3ZCX4 644 aa26.48■■□□□ 1.83
LRFN4-202ENST00000393952 FAM26DQ5JW98 314 aa26.48■■□□□ 1.83
LRFN4-202ENST00000393952 ZNF618Q5T7W0 954 aa26.48■■□□□ 1.83
LRFN4-202ENST00000393952 FAM228AQ86W67 206 aa26.48■■□□□ 1.83
LRFN4-202ENST00000393952 GPD1LQ8N335 351 aa26.48■■□□□ 1.83
LRFN4-202ENST00000393952 PAWRQ96IZ0 340 aaKnown RBP26.48■■□□□ 1.83
LRFN4-202ENST00000393952 FAM213AQ9BRX8 229 aa26.48■■□□□ 1.83
LRFN4-202ENST00000393952 N4BP3O15049 544 aa26.47■■□□□ 1.83
LRFN4-202ENST00000393952 KIAA0391O15091 583 aaKnown RBP26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms