RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 JMJD4Q9H9V9 463 aa17.55■□□□□ 0.4
PHTF1-205ENST00000393357 SIX2Q9NPC8 291 aa17.55■□□□□ 0.4
PHTF1-205ENST00000393357 COL4A1P02462 1669 aa17.55■□□□□ 0.4
PHTF1-205ENST00000393357 PARP10Q53GL7 1025 aa17.55■□□□□ 0.4
PHTF1-205ENST00000393357 RNF207Q6ZRF8 634 aa17.55■□□□□ 0.4
PHTF1-205ENST00000393357 RASGEF1CQ8N431 466 aa17.55■□□□□ 0.4
PHTF1-205ENST00000393357 CNBD1Q8NA66 436 aa17.55■□□□□ 0.4
PHTF1-205ENST00000393357 P3H4Q92791 437 aa17.55■□□□□ 0.4
PHTF1-205ENST00000393357 PAPOLBQ9NRJ5 636 aaKnown RBP17.55■□□□□ 0.4
PHTF1-205ENST00000393357 C2orf71A6NGG8 1288 aa17.54■□□□□ 0.4
PHTF1-205ENST00000393357 PHF2O75151 1096 aa17.54■□□□□ 0.4
PHTF1-205ENST00000393357 UBTFL6P0CB48 400 aaPredicted RBP17.54■□□□□ 0.4
PHTF1-205ENST00000393357 CHRNB2P17787 502 aa17.54■□□□□ 0.4
PHTF1-205ENST00000393357 FOXN2P32314 431 aa17.54■□□□□ 0.4
PHTF1-205ENST00000393357 BNIP1Q12981 228 aa17.54■□□□□ 0.4
PHTF1-205ENST00000393357 RBBP5Q15291 538 aaKnown RBP17.54■□□□□ 0.4
PHTF1-205ENST00000393357 SBK1Q52WX2 424 aa17.54■□□□□ 0.4
PHTF1-205ENST00000393357 C1orf131Q8NDD1 294 aaKnown RBP17.54■□□□□ 0.4
PHTF1-205ENST00000393357 MAGEC3Q8TD91 643 aa17.54■□□□□ 0.4
PHTF1-205ENST00000393357 UTP4Q969X6 686 aaKnown RBP17.54■□□□□ 0.4
PHTF1-205ENST00000393357 hCG_2014768A0A024R1R8 64 aa17.54■□□□□ 0.4
PHTF1-205ENST00000393357 ECEL1O95672 775 aa17.54■□□□□ 0.4
PHTF1-205ENST00000393357 GBP1P32455 592 aa17.54■□□□□ 0.4
PHTF1-205ENST00000393357 SCNN1DP51172 638 aa17.54■□□□□ 0.4
PHTF1-205ENST00000393357 NAP1L3Q99457 506 aaPredicted RBP17.54■□□□□ 0.4
PHTF1-205ENST00000393357 NPHS2Q9NP85 383 aa17.54■□□□□ 0.4
PHTF1-205ENST00000393357 ITGA8P53708 1063 aa17.53■□□□□ 0.4
PHTF1-205ENST00000393357 RCN2Q14257 317 aa17.53■□□□□ 0.4
PHTF1-205ENST00000393357 LRRC36Q1X8D7 754 aa17.53■□□□□ 0.4
PHTF1-205ENST00000393357 RFWD3Q6PCD5 774 aa17.53■□□□□ 0.4
PHTF1-205ENST00000393357 SCYL3Q8IZE3 742 aa17.53■□□□□ 0.4
PHTF1-205ENST00000393357 ZSWIM2Q8NEG5 633 aa17.53■□□□□ 0.4
PHTF1-205ENST00000393357 LRRC37BQ96QE4 947 aa17.53■□□□□ 0.4
PHTF1-205ENST00000393357 CYTH2Q99418 400 aa17.53■□□□□ 0.4
PHTF1-205ENST00000393357 SERPINA10Q9UK55 444 aa17.53■□□□□ 0.4
PHTF1-205ENST00000393357 PCDHA2Q9Y5H9 948 aa17.53■□□□□ 0.4
PHTF1-205ENST00000393357 A0A0G2JND7 137 aa17.53■□□□□ 0.4
PHTF1-205ENST00000393357 GSTA1P08263 222 aa17.53■□□□□ 0.4
PHTF1-205ENST00000393357 PDIA5Q14554 519 aa17.53■□□□□ 0.4
PHTF1-205ENST00000393357 ANO7Q6IWH7 933 aa17.53■□□□□ 0.4
PHTF1-205ENST00000393357 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.53■□□□□ 0.4
PHTF1-205ENST00000393357 CFAP69A5D8W1 941 aa17.53■□□□□ 0.4
PHTF1-205ENST00000393357 VCAM1P19320 739 aa17.53■□□□□ 0.4
PHTF1-205ENST00000393357 LMNB1P20700 586 aa17.53■□□□□ 0.4
PHTF1-205ENST00000393357 RPL13P26373 211 aaKnown RBP17.53■□□□□ 0.4
PHTF1-205ENST00000393357 C10orf76Q5T2E6 689 aa17.53■□□□□ 0.4
PHTF1-205ENST00000393357 CRELD2Q6UXH1 353 aaPredicted RBP17.53■□□□□ 0.4
PHTF1-205ENST00000393357 EPM2AIP1Q7L775 607 aaPredicted RBP17.53■□□□□ 0.4
PHTF1-205ENST00000393357 LMNTD2Q8IXW0 634 aa17.53■□□□□ 0.4
PHTF1-205ENST00000393357 UBN1Q9NPG3 1134 aa17.53■□□□□ 0.4
PHTF1-205ENST00000393357 BATF3Q9NR55 127 aa17.53■□□□□ 0.4
PHTF1-205ENST00000393357 MTUS1Q9ULD2 1270 aa17.53■□□□□ 0.4
PHTF1-205ENST00000393357 C2CD2Q9Y426 696 aa17.53■□□□□ 0.4
PHTF1-205ENST00000393357 UBAP1LF5GYI3 381 aa17.52■□□□□ 0.4
PHTF1-205ENST00000393357 CYP26A1O43174 497 aa17.52■□□□□ 0.4
PHTF1-205ENST00000393357 BANF1O75531 89 aa17.52■□□□□ 0.4
PHTF1-205ENST00000393357 NUDT17P0C025 328 aa17.52■□□□□ 0.4
PHTF1-205ENST00000393357 EEF2P13639 858 aaKnown RBP17.52■□□□□ 0.4
PHTF1-205ENST00000393357 COILP38432 576 aaPredicted RBP17.52■□□□□ 0.4
PHTF1-205ENST00000393357 PHLDB3Q6NSJ2 640 aa17.52■□□□□ 0.4
PHTF1-205ENST00000393357 CCHCR1Q8TD31 782 aa17.52■□□□□ 0.4
PHTF1-205ENST00000393357 SLC5A5Q92911 643 aa17.52■□□□□ 0.4
PHTF1-205ENST00000393357 NAALADL1Q9UQQ1 740 aa17.52■□□□□ 0.4
PHTF1-205ENST00000393357 PASKQ96RG2 1323 aa17.52■□□□□ 0.4
PHTF1-205ENST00000393357 SGPL1O95470 568 aa17.52■□□□□ 0.39
PHTF1-205ENST00000393357 PTGIRP43119 386 aa17.52■□□□□ 0.39
PHTF1-205ENST00000393357 PTDSS1P48651 473 aaKnown RBP17.52■□□□□ 0.39
PHTF1-205ENST00000393357 CGB2Q6NT52 195 aa17.52■□□□□ 0.39
PHTF1-205ENST00000393357 COL23A1Q86Y22 540 aaPredicted RBP17.52■□□□□ 0.39
PHTF1-205ENST00000393357 ZNF653Q96CK0 615 aa17.52■□□□□ 0.39
PHTF1-205ENST00000393357 INTS2Q9H0H0 1204 aaKnown RBP17.52■□□□□ 0.39
PHTF1-205ENST00000393357 STMN4Q9H169 189 aaPredicted RBP17.52■□□□□ 0.39
PHTF1-205ENST00000393357 CARD9Q9H257 536 aa17.52■□□□□ 0.39
PHTF1-205ENST00000393357 USH1CQ9Y6N9 552 aa17.52■□□□□ 0.39
PHTF1-205ENST00000393357 NUP188Q5SRE5 1749 aa17.52■□□□□ 0.39
PHTF1-205ENST00000393357 ASTN1O14525 1302 aa17.52■□□□□ 0.39
PHTF1-205ENST00000393357 RANBP1P43487 201 aa17.51■□□□□ 0.39
PHTF1-205ENST00000393357 PSMC4P43686 418 aa17.51■□□□□ 0.39
PHTF1-205ENST00000393357 FMO5P49326 533 aa17.51■□□□□ 0.39
PHTF1-205ENST00000393357 MYL7Q01449 175 aa17.51■□□□□ 0.39
PHTF1-205ENST00000393357 RRP1BQ14684 758 aaKnown RBP17.51■□□□□ 0.39
PHTF1-205ENST00000393357 CDCA2Q69YH5 1023 aaPredicted RBP17.51■□□□□ 0.39
PHTF1-205ENST00000393357 FAM13CQ8NE31 585 aa17.51■□□□□ 0.39
PHTF1-205ENST00000393357 NUP85Q9BW27 656 aa17.51■□□□□ 0.39
PHTF1-205ENST00000393357 VPS37BQ9H9H4 285 aa17.51■□□□□ 0.39
PHTF1-205ENST00000393357 RXFP1Q9HBX9 757 aa17.51■□□□□ 0.39
PHTF1-205ENST00000393357 SLIT2O94813 1529 aa17.51■□□□□ 0.39
PHTF1-205ENST00000393357 ABCB11O95342 1321 aa17.51■□□□□ 0.39
PHTF1-205ENST00000393357 ANKRD62A6NC57 917 aa17.51■□□□□ 0.39
PHTF1-205ENST00000393357 ZBTB48P10074 688 aaPredicted RBP17.51■□□□□ 0.39
PHTF1-205ENST00000393357 CA4P22748 312 aa17.51■□□□□ 0.39
PHTF1-205ENST00000393357 BLMHQ13867 455 aa17.51■□□□□ 0.39
PHTF1-205ENST00000393357 SEPT7Q16181 437 aaKnown RBP17.51■□□□□ 0.39
PHTF1-205ENST00000393357 MFSD14BQ5SR56 506 aa17.51■□□□□ 0.39
PHTF1-205ENST00000393357 SLFN11Q7Z7L1 901 aa17.51■□□□□ 0.39
PHTF1-205ENST00000393357 CENPTQ96BT3 561 aa17.51■□□□□ 0.39
PHTF1-205ENST00000393357 ACSF2Q96CM8 615 aaPredicted RBP17.51■□□□□ 0.39
PHTF1-205ENST00000393357 TBC1D10AQ9BXI6 508 aa17.51■□□□□ 0.39
PHTF1-205ENST00000393357 IFNB1P01574 187 aa17.51■□□□□ 0.39
PHTF1-205ENST00000393357 ETS2P15036 469 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms