RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 MTMR3Q13615 1198 aa16.14■□□□□ 0.17
SCFD2-201ENST00000388940 SNRNP35Q16560 246 aaKnown RBP16.14■□□□□ 0.17
SCFD2-201ENST00000388940 KRT39Q6A163 491 aa16.14■□□□□ 0.17
SCFD2-201ENST00000388940 TMC2Q8TDI7 906 aa16.14■□□□□ 0.17
SCFD2-201ENST00000388940 JDP2Q8WYK2 163 aa16.14■□□□□ 0.17
SCFD2-201ENST00000388940 KIFAP3Q92845 792 aa16.14■□□□□ 0.17
SCFD2-201ENST00000388940 ATP6V1G3Q96LB4 118 aa16.14■□□□□ 0.17
SCFD2-201ENST00000388940 FBXL18Q96ME1 805 aa16.14■□□□□ 0.17
SCFD2-201ENST00000388940 UTP11Q9Y3A2 253 aaKnown RBP16.14■□□□□ 0.17
SCFD2-201ENST00000388940 PCDHA10Q9Y5I2 948 aa16.14■□□□□ 0.17
SCFD2-201ENST00000388940 H0YGN5 161 aa16.13■□□□□ 0.17
SCFD2-201ENST00000388940 DKC1O60832 514 aaKnown RBP eCLIP16.13■□□□□ 0.17
SCFD2-201ENST00000388940 HSPA6P17066 643 aa16.13■□□□□ 0.17
SCFD2-201ENST00000388940 CCND2P30279 289 aa16.13■□□□□ 0.17
SCFD2-201ENST00000388940 GTF2H1P32780 548 aa16.13■□□□□ 0.17
SCFD2-201ENST00000388940 GNGT1P63211 74 aa16.13■□□□□ 0.17
SCFD2-201ENST00000388940 DMP1Q13316 513 aaPredicted RBP16.13■□□□□ 0.17
SCFD2-201ENST00000388940 PLA2G4FQ68DD2 849 aa16.13■□□□□ 0.17
SCFD2-201ENST00000388940 ANO5Q75V66 913 aa16.13■□□□□ 0.17
SCFD2-201ENST00000388940 OTUD6AQ7L8S5 288 aa16.13■□□□□ 0.17
SCFD2-201ENST00000388940 NLRX1Q86UT6 975 aa16.13■□□□□ 0.17
SCFD2-201ENST00000388940 DDX42Q86XP3 938 aaKnown RBP eCLIP16.13■□□□□ 0.17
SCFD2-201ENST00000388940 EPS8L1Q8TE68 723 aa16.13■□□□□ 0.17
SCFD2-201ENST00000388940 PARD3BQ8TEW8 1205 aa16.13■□□□□ 0.17
SCFD2-201ENST00000388940 SHC3Q92529 594 aa16.13■□□□□ 0.17
SCFD2-201ENST00000388940 SH2D3AQ9BRG2 576 aa16.13■□□□□ 0.17
SCFD2-201ENST00000388940 RAB17Q9H0T7 212 aa16.13■□□□□ 0.17
SCFD2-201ENST00000388940 NEUROG2Q9H2A3 272 aa16.13■□□□□ 0.17
SCFD2-201ENST00000388940 YY1AP1Q9H869 796 aa16.13■□□□□ 0.17
SCFD2-201ENST00000388940 TMBIM4Q9HC24 238 aa16.13■□□□□ 0.17
SCFD2-201ENST00000388940 TMEM8AQ9HCN3 771 aa16.13■□□□□ 0.17
SCFD2-201ENST00000388940 PIM2Q9P1W9 311 aa16.13■□□□□ 0.17
SCFD2-201ENST00000388940 RSPH14Q9UHP6 348 aa16.13■□□□□ 0.17
SCFD2-201ENST00000388940 NFS1Q9Y697 457 aa16.13■□□□□ 0.17
SCFD2-201ENST00000388940 COL11A1P12107 1806 aaPredicted RBP16.13■□□□□ 0.17
SCFD2-201ENST00000388940 GOLGA6L10A0A0M3HER8 536 aa16.13■□□□□ 0.17
SCFD2-201ENST00000388940 FAM187AA6NFU0 413 aa16.13■□□□□ 0.17
SCFD2-201ENST00000388940 ANKRD63C9JTQ0 380 aa16.13■□□□□ 0.17
SCFD2-201ENST00000388940 TTI1O43156 1089 aa16.13■□□□□ 0.17
SCFD2-201ENST00000388940 CNGA1P29973 690 aa16.13■□□□□ 0.17
SCFD2-201ENST00000388940 GPC3P51654 580 aa16.13■□□□□ 0.17
SCFD2-201ENST00000388940 OAZ1P54368 228 aa16.13■□□□□ 0.17
SCFD2-201ENST00000388940 UAP1Q16222 522 aaPredicted RBP16.13■□□□□ 0.17
SCFD2-201ENST00000388940 SPDYCQ5MJ68 293 aa16.13■□□□□ 0.17
SCFD2-201ENST00000388940 CBWD2Q8IUF1 395 aa16.13■□□□□ 0.17
SCFD2-201ENST00000388940 MFSD14AQ96MC6 490 aa16.13■□□□□ 0.17
SCFD2-201ENST00000388940 KREMEN1Q96MU8 473 aa16.13■□□□□ 0.17
SCFD2-201ENST00000388940 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.13■□□□□ 0.17
SCFD2-201ENST00000388940 CTTNBP2NLQ9P2B4 639 aa16.13■□□□□ 0.17
SCFD2-201ENST00000388940 SCAF8Q9UPN6 1271 aaKnown RBP16.13■□□□□ 0.17
SCFD2-201ENST00000388940 TESPA1A2RU30 521 aaPredicted RBP16.12■□□□□ 0.17
SCFD2-201ENST00000388940 MYO1CO00159 1063 aa16.12■□□□□ 0.17
SCFD2-201ENST00000388940 DAPK3O43293 454 aa16.12■□□□□ 0.17
SCFD2-201ENST00000388940 SGPL1O95470 568 aa16.12■□□□□ 0.17
SCFD2-201ENST00000388940 RTP1P59025 263 aa16.12■□□□□ 0.17
SCFD2-201ENST00000388940 TGFB2P61812 414 aa16.12■□□□□ 0.17
SCFD2-201ENST00000388940 BAATQ14032 418 aaPredicted RBP16.12■□□□□ 0.17
SCFD2-201ENST00000388940 NSMFQ6X4W1 530 aa16.12■□□□□ 0.17
SCFD2-201ENST00000388940 NOP9Q86U38 636 aaKnown RBP16.12■□□□□ 0.17
SCFD2-201ENST00000388940 UBL4BQ8N7F7 174 aa16.12■□□□□ 0.17
SCFD2-201ENST00000388940 ALG3Q92685 438 aa16.12■□□□□ 0.17
SCFD2-201ENST00000388940 KAT5Q92993 513 aa16.12■□□□□ 0.17
SCFD2-201ENST00000388940 PCDHB18PQ96TA0 734 aa16.12■□□□□ 0.17
SCFD2-201ENST00000388940 MAF1Q9H063 256 aa16.12■□□□□ 0.17
SCFD2-201ENST00000388940 TAOK3Q9H2K8 898 aa16.12■□□□□ 0.17
SCFD2-201ENST00000388940 RNF146Q9NTX7 359 aa16.12■□□□□ 0.17
SCFD2-201ENST00000388940 NR2E1Q9Y466 385 aa16.12■□□□□ 0.17
SCFD2-201ENST00000388940 SYNGAP1Q96PV0 1343 aa16.12■□□□□ 0.17
SCFD2-201ENST00000388940 GOLGA8IPA6NC78 632 aa16.11■□□□□ 0.17
SCFD2-201ENST00000388940 GOLGA8JA6NMD2 632 aa16.11■□□□□ 0.17
SCFD2-201ENST00000388940 CCDC169A6NNP5 214 aa16.11■□□□□ 0.17
SCFD2-201ENST00000388940 STBD1O95210 358 aa16.11■□□□□ 0.17
SCFD2-201ENST00000388940 NR3C2P08235 984 aa16.11■□□□□ 0.17
SCFD2-201ENST00000388940 BACE1P56817 501 aa16.11■□□□□ 0.17
SCFD2-201ENST00000388940 DHX34Q14147 1143 aaKnown RBP16.11■□□□□ 0.17
SCFD2-201ENST00000388940 DNAJC21Q5F1R6 531 aaKnown RBP16.11■□□□□ 0.17
SCFD2-201ENST00000388940 USP37Q86T82 979 aa16.11■□□□□ 0.17
SCFD2-201ENST00000388940 EFCAB13Q8IY85 973 aa16.11■□□□□ 0.17
SCFD2-201ENST00000388940 SH2D3CQ8N5H7 860 aa16.11■□□□□ 0.17
SCFD2-201ENST00000388940 REPS2Q8NFH8 660 aa16.11■□□□□ 0.17
SCFD2-201ENST00000388940 SEMA4DQ92854 862 aa16.11■□□□□ 0.17
SCFD2-201ENST00000388940 ATG4CQ96DT6 458 aa16.11■□□□□ 0.17
SCFD2-201ENST00000388940 KMT5AQ9NQR1 393 aa16.11■□□□□ 0.17
SCFD2-201ENST00000388940 PDLIM7Q9NR12 457 aa16.11■□□□□ 0.17
SCFD2-201ENST00000388940 LCMT1Q9UIC8 334 aa16.11■□□□□ 0.17
SCFD2-201ENST00000388940 ZNF112Q9UJU3 913 aa16.11■□□□□ 0.17
SCFD2-201ENST00000388940 PHIPQ8WWQ0 1821 aa16.11■□□□□ 0.17
SCFD2-201ENST00000388940 DENND3A2RUS2 1198 aa16.11■□□□□ 0.17
SCFD2-201ENST00000388940 GGPS1O95749 300 aa16.11■□□□□ 0.17
SCFD2-201ENST00000388940 EGFRP00533 1210 aa16.11■□□□□ 0.17
SCFD2-201ENST00000388940 BRD2P25440 801 aaKnown RBP16.11■□□□□ 0.17
SCFD2-201ENST00000388940 DRG2P55039 364 aaKnown RBP16.11■□□□□ 0.17
SCFD2-201ENST00000388940 MAP2K1Q02750 393 aaPredicted RBP16.11■□□□□ 0.17
SCFD2-201ENST00000388940 CEP85LQ5SZL2 805 aa16.11■□□□□ 0.17
SCFD2-201ENST00000388940 KCTD16Q68DU8 428 aa16.11■□□□□ 0.17
SCFD2-201ENST00000388940 HELQQ8TDG4 1101 aa16.11■□□□□ 0.17
SCFD2-201ENST00000388940 ATP6V0A1Q93050 837 aa16.11■□□□□ 0.17
SCFD2-201ENST00000388940 ZSWIM1Q9BR11 485 aa16.11■□□□□ 0.17
SCFD2-201ENST00000388940 CELF4Q9BZC1 486 aaKnown RBP16.11■□□□□ 0.17
SCFD2-201ENST00000388940 WNT8AQ9H1J5 351 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms