RNA–Protein interactions for RNA: ENST00000381984.2

RFX3-203, Transcript of regulatory factor X3, humanhuman

TSL 3 BASIC

Gene RFX3, Length 364 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-203ENST00000381984 SLC5A4Q9NY91 659 aa3.85□□□□□ -1.79
RFX3-203ENST00000381984 HOXC10Q9NYD6 342 aa3.85□□□□□ -1.79
RFX3-203ENST00000381984 SWAP70Q9UH65 585 aa3.85□□□□□ -1.79
RFX3-203ENST00000381984 CROTQ9UKG9 612 aa3.85□□□□□ -1.79
RFX3-203ENST00000381984 HPCAL4Q9UM19 191 aa3.85□□□□□ -1.79
RFX3-203ENST00000381984 BZW2Q9Y6E2 419 aaKnown RBP3.85□□□□□ -1.79
RFX3-203ENST00000381984 TAF6LQ9Y6J9 622 aa3.85□□□□□ -1.79
RFX3-203ENST00000381984 NPHP3Q7Z494 1330 aa3.85□□□□□ -1.79
RFX3-203ENST00000381984 ABCC11Q96J66 1382 aa3.85□□□□□ -1.79
RFX3-203ENST00000381984 SETD1BQ9UPS6 1966 aaKnown RBP3.85□□□□□ -1.79
RFX3-203ENST00000381984 PZPP20742 1482 aa3.85□□□□□ -1.79
RFX3-203ENST00000381984 UGGT2Q9NYU1 1516 aa3.85□□□□□ -1.79
RFX3-203ENST00000381984 ITSN2Q9NZM3 1697 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 CDC42BPAQ5VT25 1732 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 SUPT6HQ7KZ85 1726 aaKnown RBP3.84□□□□□ -1.79
RFX3-203ENST00000381984 KIF13AQ9H1H9 1805 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 A0A1B0GVL5 298 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 A0A1W2PQH9 124 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 VWA3AA6NCI4 1184 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 NDUFAB1O14561 156 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 SHOXO15266 292 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 FIBPO43427 364 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 STX6O43752 255 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 BUB1BO60566 1050 aaPredicted RBP3.84□□□□□ -1.79
RFX3-203ENST00000381984 TMCC1O94876 653 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 ZNF202O95125 648 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 ANP32DO95626 131 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 SSBP05455 408 aaKnown RBP eCLIP3.84□□□□□ -1.79
RFX3-203ENST00000381984 GSNP06396 782 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 EPB41P11171 864 aaKnown RBP3.84□□□□□ -1.79
RFX3-203ENST00000381984 IFNGR1P15260 489 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 TRIM21P19474 475 aaKnown RBP3.84□□□□□ -1.79
RFX3-203ENST00000381984 SFPQP23246 707 aaKnown RBP eCLIP3.84□□□□□ -1.79
RFX3-203ENST00000381984 VAMP1P23763 118 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 TACR1P25103 407 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 HSPA4P34932 840 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 CA8P35219 290 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 TCF7P36402 384 aaPredicted RBP3.84□□□□□ -1.79
RFX3-203ENST00000381984 AFF3P51826 1226 aaKnown RBP3.84□□□□□ -1.79
RFX3-203ENST00000381984 NEK2P51955 445 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 VSNL1P62760 191 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 ELF3P78545 371 aaPredicted RBP3.84□□□□□ -1.79
RFX3-203ENST00000381984 SRSF3P84103 164 aaKnown RBP3.84□□□□□ -1.79
RFX3-203ENST00000381984 MXRA7P84157 204 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 SULT2A1Q06520 285 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 KIF5AQ12840 1032 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 MYO1EQ12965 1108 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 STIM1Q13586 685 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 STX1AQ16623 288 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 RNF187Q5TA31 235 aaPredicted RBP3.84□□□□□ -1.79
RFX3-203ENST00000381984 LARP1BQ659C4 914 aaKnown RBP3.84□□□□□ -1.79
RFX3-203ENST00000381984 CREB3L3Q68CJ9 461 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 GALNT17Q6IS24 598 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 KIAA1211LQ6NV74 962 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 ATF7IPQ6VMQ6 1270 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 CCDC73Q6ZRK6 1079 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 Q6ZUG5 572 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 CCDC121Q6ZUS5 278 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 NCCRP1Q6ZVX7 275 aaPredicted RBP3.84□□□□□ -1.79
RFX3-203ENST00000381984 RSPH3Q86UC2 560 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 SLC15A3Q8IY34 581 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 CEP57L1Q8IYX8 460 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 NSUN7Q8NE18 718 aaKnown RBP3.84□□□□□ -1.79
RFX3-203ENST00000381984 SMARCC2Q8TAQ2 1214 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 ZNF473Q8WTR7 871 aaKnown RBP3.84□□□□□ -1.79
RFX3-203ENST00000381984 LINC01599Q8WXQ3 324 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 TAF4BQ92750 862 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 DHX58Q96C10 678 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 EVI5LQ96CN4 794 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 OPTNQ96CV9 577 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 SORCS2Q96PQ0 1159 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 TRAPPC9Q96Q05 1148 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 MENTQ9BUN1 341 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 BDH2Q9BUT1 245 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 LGR4Q9BXB1 951 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 MAK16Q9BXY0 300 aaKnown RBP3.84□□□□□ -1.79
RFX3-203ENST00000381984 EPN3Q9H201 632 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 GOLPH3LQ9H4A5 285 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 PREBQ9HCU5 417 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 DMAP1Q9NPF5 467 aaPredicted RBP3.84□□□□□ -1.79
RFX3-203ENST00000381984 HAUS2Q9NVX0 235 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 ANO10Q9NW15 660 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 ERVK13-1Q9NX77 482 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 GALNT8Q9NY28 637 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 RABL2AQ9UBK7 228 aaPredicted RBP3.84□□□□□ -1.79
RFX3-203ENST00000381984 CDC23Q9UJX2 597 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 PAIP2BQ9ULR5 123 aaKnown RBP3.84□□□□□ -1.79
RFX3-203ENST00000381984 ZNF148Q9UQR1 794 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 YBX2Q9Y2T7 364 aaKnown RBP3.84□□□□□ -1.79
RFX3-203ENST00000381984 C2CD2Q9Y426 696 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 TTLL3Q9Y4R7 772 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 N6AMT1Q9Y5N5 214 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 SLC4A7Q9Y6M7 1214 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 UBN2Q6ZU65 1347 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 TTC21AQ8NDW8 1320 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 NSD2O96028 1365 aa3.84□□□□□ -1.79
RFX3-203ENST00000381984 PLA2R1Q13018 1463 aa3.84□□□□□ -1.8
RFX3-203ENST00000381984 IQSEC2Q5JU85 1478 aa3.84□□□□□ -1.8
RFX3-203ENST00000381984 LMTK2Q8IWU2 1503 aa3.84□□□□□ -1.8
RFX3-203ENST00000381984 CEP170Q5SW79 1584 aa3.84□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms