RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 MAP4K3Q8IVH8 894 aa15.45■□□□□ 0.06
CLCN4-201ENST00000380829 CNPY4Q8N129 248 aa15.45■□□□□ 0.06
CLCN4-201ENST00000380829 OPTNQ96CV9 577 aa15.45■□□□□ 0.06
CLCN4-201ENST00000380829 NOX5Q96PH1 765 aa15.45■□□□□ 0.06
CLCN4-201ENST00000380829 CD248Q9HCU0 757 aa15.45■□□□□ 0.06
CLCN4-201ENST00000380829 LUC7LQ9NQ29 371 aaKnown RBP15.45■□□□□ 0.06
CLCN4-201ENST00000380829 BZW2Q9Y6E2 419 aaKnown RBP15.45■□□□□ 0.06
CLCN4-201ENST00000380829 SYNGAP1Q96PV0 1343 aa15.45■□□□□ 0.06
CLCN4-201ENST00000380829 IGSF9BQ9UPX0 1349 aa15.45■□□□□ 0.06
CLCN4-201ENST00000380829 ARID2Q68CP9 1835 aa15.44■□□□□ 0.06
CLCN4-201ENST00000380829 F8VZ95 297 aa15.44■□□□□ 0.06
CLCN4-201ENST00000380829 PGK2P07205 417 aa15.44■□□□□ 0.06
CLCN4-201ENST00000380829 CNGA1P29973 690 aa15.44■□□□□ 0.06
CLCN4-201ENST00000380829 PRKCIP41743 596 aa15.44■□□□□ 0.06
CLCN4-201ENST00000380829 C1orf220Q5T0J3 134 aa15.44■□□□□ 0.06
CLCN4-201ENST00000380829 WDR93Q6P2C0 686 aa15.44■□□□□ 0.06
CLCN4-201ENST00000380829 USP50Q70EL3 339 aaPredicted RBP15.44■□□□□ 0.06
CLCN4-201ENST00000380829 CBWD2Q8IUF1 395 aa15.44■□□□□ 0.06
CLCN4-201ENST00000380829 SLC17A8Q8NDX2 589 aa15.44■□□□□ 0.06
CLCN4-201ENST00000380829 HINFPQ9BQA5 517 aa15.44■□□□□ 0.06
CLCN4-201ENST00000380829 MAF1Q9H063 256 aa15.44■□□□□ 0.06
CLCN4-201ENST00000380829 ATP6V0A4Q9HBG4 840 aa15.44■□□□□ 0.06
CLCN4-201ENST00000380829 ZNF302Q9NR11 478 aa15.44■□□□□ 0.06
CLCN4-201ENST00000380829 PDLIM7Q9NR12 457 aa15.44■□□□□ 0.06
CLCN4-201ENST00000380829 APEX2Q9UBZ4 518 aa15.44■□□□□ 0.06
CLCN4-201ENST00000380829 CXCL11O14625 94 aa15.44■□□□□ 0.06
CLCN4-201ENST00000380829 EVI5O60447 810 aa15.44■□□□□ 0.06
CLCN4-201ENST00000380829 MYBL2P10244 700 aa15.44■□□□□ 0.06
CLCN4-201ENST00000380829 STAT1P42224 750 aa15.44■□□□□ 0.06
CLCN4-201ENST00000380829 ARHGAP44Q17R89 818 aa15.44■□□□□ 0.06
CLCN4-201ENST00000380829 PHLDB3Q6NSJ2 640 aa15.44■□□□□ 0.06
CLCN4-201ENST00000380829 NFRKBQ6P4R8 1299 aa15.44■□□□□ 0.06
CLCN4-201ENST00000380829 MCPH1Q8NEM0 835 aa15.44■□□□□ 0.06
CLCN4-201ENST00000380829 FAM76AQ8TAV0 307 aa15.44■□□□□ 0.06
CLCN4-201ENST00000380829 CAGE1Q8TC20 777 aa15.44■□□□□ 0.06
CLCN4-201ENST00000380829 POLR3FQ9H1D9 316 aaPredicted RBP15.44■□□□□ 0.06
CLCN4-201ENST00000380829 VIPAS39Q9H9C1 493 aa15.44■□□□□ 0.06
CLCN4-201ENST00000380829 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.44■□□□□ 0.066e-9■■■■■ 134.6
CLCN4-201ENST00000380829 SNX12Q9UMY4 172 aa15.44■□□□□ 0.06
CLCN4-201ENST00000380829 EXOC7Q9UPT5 735 aa15.44■□□□□ 0.06
CLCN4-201ENST00000380829 AGTPBP1Q9UPW5 1226 aa15.44■□□□□ 0.06
CLCN4-201ENST00000380829 GRIN2DO15399 1336 aa15.44■□□□□ 0.06
CLCN4-201ENST00000380829 CCDC189A1A4V9 331 aa15.43■□□□□ 0.06
CLCN4-201ENST00000380829 FAM170AA1A519 330 aa15.43■□□□□ 0.06
CLCN4-201ENST00000380829 AGPSO00116 658 aa15.43■□□□□ 0.06
CLCN4-201ENST00000380829 PDE2AO00408 941 aaPredicted RBP15.43■□□□□ 0.06
CLCN4-201ENST00000380829 CXCR5P32302 372 aa15.43■□□□□ 0.06
CLCN4-201ENST00000380829 SOX5P35711 763 aa15.43■□□□□ 0.06
CLCN4-201ENST00000380829 USP8P40818 1118 aa15.43■□□□□ 0.06
CLCN4-201ENST00000380829 NAB2Q15742 525 aa15.43■□□□□ 0.06
CLCN4-201ENST00000380829 Q3C1V9 767 aa15.43■□□□□ 0.06
CLCN4-201ENST00000380829 XKR3Q5GH77 459 aa15.43■□□□□ 0.06
CLCN4-201ENST00000380829 SLC39A4Q6P5W5 647 aa15.43■□□□□ 0.06
CLCN4-201ENST00000380829 LMO3Q8TAP4 145 aa15.43■□□□□ 0.06
CLCN4-201ENST00000380829 COG1Q8WTW3 980 aa15.43■□□□□ 0.06
CLCN4-201ENST00000380829 TMEM174Q8WUU8 243 aa15.43■□□□□ 0.06
CLCN4-201ENST00000380829 SPIRE2Q8WWL2 714 aa15.43■□□□□ 0.06
CLCN4-201ENST00000380829 L3MBTL3Q96JM7 780 aaPredicted RBP15.43■□□□□ 0.06
CLCN4-201ENST00000380829 STK33Q9BYT3 514 aa15.43■□□□□ 0.06
CLCN4-201ENST00000380829 GPR88Q9GZN0 384 aa15.43■□□□□ 0.06
CLCN4-201ENST00000380829 NAGPAQ9UK23 515 aa15.43■□□□□ 0.06
CLCN4-201ENST00000380829 GOLGA6CA6NDK9 693 aa15.43■□□□□ 0.06
CLCN4-201ENST00000380829 GOLGA6DP0CG33 693 aa15.43■□□□□ 0.06
CLCN4-201ENST00000380829 POLGP54098 1239 aaPredicted RBP15.43■□□□□ 0.06
CLCN4-201ENST00000380829 EMC2Q15006 297 aa15.43■□□□□ 0.06
CLCN4-201ENST00000380829 SNRNP35Q16560 246 aaKnown RBP15.43■□□□□ 0.06
CLCN4-201ENST00000380829 ALKBH5Q6P6C2 394 aaKnown RBP15.43■□□□□ 0.06
CLCN4-201ENST00000380829 RNF10Q8N5U6 811 aaKnown RBP15.43■□□□□ 0.06
CLCN4-201ENST00000380829 TMEM143Q96AN5 459 aa15.43■□□□□ 0.06
CLCN4-201ENST00000380829 CCDC127Q96BQ5 260 aa15.43■□□□□ 0.06
CLCN4-201ENST00000380829 NTPCRQ9BSD7 190 aaKnown RBP15.43■□□□□ 0.06
CLCN4-201ENST00000380829 GOLGA6AQ9NYA3 693 aa15.43■□□□□ 0.06
CLCN4-201ENST00000380829 KCNH4Q9UQ05 1017 aa15.43■□□□□ 0.06
CLCN4-201ENST00000380829 MAFBQ9Y5Q3 323 aaPredicted RBP15.43■□□□□ 0.06
CLCN4-201ENST00000380829 MYH9P35579 1960 aaKnown RBP15.42■□□□□ 0.06
CLCN4-201ENST00000380829 PALMO75781 387 aa15.42■□□□□ 0.06
CLCN4-201ENST00000380829 FARP2O94887 1054 aaPredicted RBP15.42■□□□□ 0.06
CLCN4-201ENST00000380829 ATG7O95352 703 aa15.42■□□□□ 0.06
CLCN4-201ENST00000380829 OATP04181 439 aa15.42■□□□□ 0.06
CLCN4-201ENST00000380829 FERP16591 822 aa15.42■□□□□ 0.06
CLCN4-201ENST00000380829 EDNRBP24530 442 aa15.42■□□□□ 0.06
CLCN4-201ENST00000380829 PPIL2Q13356 520 aa15.42■□□□□ 0.06
CLCN4-201ENST00000380829 WDR78Q5VTH9 848 aa15.42■□□□□ 0.06
CLCN4-201ENST00000380829 C17orf75Q9HAS0 396 aa15.42■□□□□ 0.06
CLCN4-201ENST00000380829 RBPJLQ9UBG7 517 aa15.42■□□□□ 0.06
CLCN4-201ENST00000380829 USP20Q9Y2K6 914 aa15.42■□□□□ 0.06
CLCN4-201ENST00000380829 HNRNPDLO14979 420 aaKnown RBP15.42■□□□□ 0.06
CLCN4-201ENST00000380829 SNRPFP62306 86 aaKnown RBP15.42■□□□□ 0.06
CLCN4-201ENST00000380829 GNGT1P63211 74 aa15.42■□□□□ 0.06
CLCN4-201ENST00000380829 MOGSQ13724 837 aa15.42■□□□□ 0.06
CLCN4-201ENST00000380829 LY6KQ17RY6 165 aa15.42■□□□□ 0.06
CLCN4-201ENST00000380829 TAS1R3Q7RTX0 852 aa15.42■□□□□ 0.06
CLCN4-201ENST00000380829 BICD1Q96G01 975 aa15.42■□□□□ 0.06
CLCN4-201ENST00000380829 IFT74Q96LB3 600 aa15.42■□□□□ 0.06
CLCN4-201ENST00000380829 POP1Q99575 1024 aaKnown RBP15.42■□□□□ 0.06
CLCN4-201ENST00000380829 H0YHG0 523 aa15.41■□□□□ 0.06
CLCN4-201ENST00000380829 DDX3XO00571 662 aaKnown RBP eCLIP15.41■□□□□ 0.06
CLCN4-201ENST00000380829 ECM2O94769 699 aaPredicted RBP15.41■□□□□ 0.06
CLCN4-201ENST00000380829 FTCDO95954 541 aa15.41■□□□□ 0.06
CLCN4-201ENST00000380829 DNA2P51530 1060 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms