RNA–Protein interactions for RNA: ENST00000380265.9

HERC6-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HERC6, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-203ENST00000380265 USP17L22D6RA61 530 aa13.03□□□□□ -0.32
HERC6-203ENST00000380265 USP17L17D6RBQ6 530 aa13.03□□□□□ -0.32
HERC6-203ENST00000380265 USP17L19D6RCP7 530 aa13.03□□□□□ -0.32
HERC6-203ENST00000380265 USP17L20D6RJB6 530 aa13.03□□□□□ -0.32
HERC6-203ENST00000380265 CLDN3O15551 220 aa13.03□□□□□ -0.32
HERC6-203ENST00000380265 MED24O75448 989 aa13.03□□□□□ -0.32
HERC6-203ENST00000380265 TPBGLP0DKB5 382 aa13.03□□□□□ -0.32
HERC6-203ENST00000380265 GJC1P36383 396 aa13.03□□□□□ -0.32
HERC6-203ENST00000380265 PSMC6P62333 389 aa13.03□□□□□ -0.32
HERC6-203ENST00000380265 USP17L24Q0WX57 530 aa13.03□□□□□ -0.32
HERC6-203ENST00000380265 ORC2Q13416 577 aaPredicted RBP13.03□□□□□ -0.32
HERC6-203ENST00000380265 PRR16Q569H4 304 aa13.03□□□□□ -0.32
HERC6-203ENST00000380265 RASIP1Q5U651 963 aa13.03□□□□□ -0.32
HERC6-203ENST00000380265 USP17L6PQ6QN14 398 aa13.03□□□□□ -0.32
HERC6-203ENST00000380265 PPP1R21Q6ZMI0 780 aa13.03□□□□□ -0.32
HERC6-203ENST00000380265 ASRGL1Q7L266 308 aa13.03□□□□□ -0.32
HERC6-203ENST00000380265 UCMAQ8WVF2 138 aa13.03□□□□□ -0.32
HERC6-203ENST00000380265 UTP4Q969X6 686 aaKnown RBP13.03□□□□□ -0.32
HERC6-203ENST00000380265 BCAS3Q9H6U6 928 aa13.03□□□□□ -0.32
HERC6-203ENST00000380265 PSTPIP2Q9H939 334 aa13.03□□□□□ -0.32
HERC6-203ENST00000380265 FER1L4A9Z1Z3 1794 aa13.03□□□□□ -0.32
HERC6-203ENST00000380265 MIF4GDA9UHW6 222 aaKnown RBP13.02□□□□□ -0.32
HERC6-203ENST00000380265 FAM13AO94988 1023 aa13.02□□□□□ -0.32
HERC6-203ENST00000380265 ZBTB16Q05516 673 aa13.02□□□□□ -0.32
HERC6-203ENST00000380265 MKRN3Q13064 507 aaKnown RBP13.02□□□□□ -0.32
HERC6-203ENST00000380265 RHOT2Q8IXI1 618 aa13.02□□□□□ -0.32
HERC6-203ENST00000380265 MYCT1Q8N699 235 aa13.02□□□□□ -0.32
HERC6-203ENST00000380265 PPFIBP2Q8ND30 876 aa13.02□□□□□ -0.32
HERC6-203ENST00000380265 SLC20A1Q8WUM9 679 aa13.02□□□□□ -0.32
HERC6-203ENST00000380265 ATG4AQ8WYN0 398 aa13.02□□□□□ -0.32
HERC6-203ENST00000380265 STMN2Q93045 179 aa13.02□□□□□ -0.32
HERC6-203ENST00000380265 MAGEB18Q96M61 343 aa13.02□□□□□ -0.32
HERC6-203ENST00000380265 ZSWIM1Q9BR11 485 aa13.02□□□□□ -0.32
HERC6-203ENST00000380265 BHMT2Q9H2M3 363 aa13.02□□□□□ -0.32
HERC6-203ENST00000380265 CCDC87Q9NVE4 849 aa13.02□□□□□ -0.32
HERC6-203ENST00000380265 ANKIB1Q9P2G1 1089 aa13.02□□□□□ -0.32
HERC6-203ENST00000380265 DCTN4Q9UJW0 460 aa13.02□□□□□ -0.32
HERC6-203ENST00000380265 MAP3K13O43283 966 aa13.02□□□□□ -0.33
HERC6-203ENST00000380265 PPATQ06203 517 aa13.02□□□□□ -0.33
HERC6-203ENST00000380265 MTFR1Q15390 333 aa13.02□□□□□ -0.33
HERC6-203ENST00000380265 SAMD1Q6SPF0 538 aaPredicted RBP13.02□□□□□ -0.33
HERC6-203ENST00000380265 CYP4X1Q8N118 509 aa13.02□□□□□ -0.33
HERC6-203ENST00000380265 MCUR1Q96AQ8 359 aa13.02□□□□□ -0.33
HERC6-203ENST00000380265 FAM118BQ9BPY3 351 aa13.02□□□□□ -0.33
HERC6-203ENST00000380265 BSDC1Q9NW68 430 aaPredicted RBP13.02□□□□□ -0.33
HERC6-203ENST00000380265 ANAPC5Q9UJX4 755 aa13.02□□□□□ -0.33
HERC6-203ENST00000380265 GLI3P10071 1580 aa13.02□□□□□ -0.33
HERC6-203ENST00000380265 NTSR2O95665 410 aa13.02□□□□□ -0.33
HERC6-203ENST00000380265 ATF2P15336 505 aa13.02□□□□□ -0.33
HERC6-203ENST00000380265 ANXA13P27216 316 aa13.02□□□□□ -0.33
HERC6-203ENST00000380265 HOXA7P31268 230 aaPredicted RBP13.02□□□□□ -0.33
HERC6-203ENST00000380265 POLGP54098 1239 aaPredicted RBP13.02□□□□□ -0.33
HERC6-203ENST00000380265 CPNE8Q86YQ8 564 aa13.02□□□□□ -0.33
HERC6-203ENST00000380265 SCYL3Q8IZE3 742 aa13.02□□□□□ -0.33
HERC6-203ENST00000380265 ANKRD35Q8N283 1001 aa13.02□□□□□ -0.33
HERC6-203ENST00000380265 ERMNQ8TAM6 284 aa13.02□□□□□ -0.33
HERC6-203ENST00000380265 STK33Q9BYT3 514 aa13.02□□□□□ -0.33
HERC6-203ENST00000380265 SIX2Q9NPC8 291 aa13.02□□□□□ -0.33
HERC6-203ENST00000380265 TYW1Q9NV66 732 aaKnown RBP13.02□□□□□ -0.33
HERC6-203ENST00000380265 STOML1Q9UBI4 398 aa13.02□□□□□ -0.33
HERC6-203ENST00000380265 PHTF1Q9UMS5 762 aa13.02□□□□□ -0.33
HERC6-203ENST00000380265 USH1CQ9Y6N9 552 aa13.02□□□□□ -0.33
HERC6-203ENST00000380265 TNS2Q63HR2 1409 aa13.02□□□□□ -0.33
HERC6-203ENST00000380265 ATP5HO75947 161 aa13.01□□□□□ -0.33
HERC6-203ENST00000380265 SKIP12755 728 aa13.01□□□□□ -0.33
HERC6-203ENST00000380265 KCNA3P22001 575 aa13.01□□□□□ -0.33
HERC6-203ENST00000380265 CRKLP46109 303 aaKnown RBP13.01□□□□□ -0.33
HERC6-203ENST00000380265 HHATQ5VTY9 493 aa13.01□□□□□ -0.33
HERC6-203ENST00000380265 MFSD5Q6N075 450 aa13.01□□□□□ -0.33
HERC6-203ENST00000380265 HS2ST1Q7LGA3 356 aa13.01□□□□□ -0.33
HERC6-203ENST00000380265 TXNRD3Q86VQ6 643 aa13.01□□□□□ -0.33
HERC6-203ENST00000380265 SYCP3Q8IZU3 236 aa13.01□□□□□ -0.33
HERC6-203ENST00000380265 VPS52Q8N1B4 723 aa13.01□□□□□ -0.33
HERC6-203ENST00000380265 NAALADL1Q9UQQ1 740 aa13.01□□□□□ -0.33
HERC6-203ENST00000380265 MYH3P11055 1940 aa13.01□□□□□ -0.33
HERC6-203ENST00000380265 PDXKO00764 312 aa13.01□□□□□ -0.33
HERC6-203ENST00000380265 SP100P23497 879 aaPredicted RBP13.01□□□□□ -0.33
HERC6-203ENST00000380265 FOXN2P32314 431 aa13.01□□□□□ -0.33
HERC6-203ENST00000380265 PSMC2P35998 433 aaKnown RBP13.01□□□□□ -0.33
HERC6-203ENST00000380265 SERPINB4P48594 390 aa13.01□□□□□ -0.33
HERC6-203ENST00000380265 PICALMQ13492 652 aa13.01□□□□□ -0.33
HERC6-203ENST00000380265 RNF43Q68DV7 783 aa13.01□□□□□ -0.33
HERC6-203ENST00000380265 MIGA2Q7L4E1 593 aa13.01□□□□□ -0.33
HERC6-203ENST00000380265 FBXO33Q7Z6M2 555 aa13.01□□□□□ -0.33
HERC6-203ENST00000380265 PHLDB2Q86SQ0 1253 aa13.01□□□□□ -0.33
HERC6-203ENST00000380265 PRUNE1Q86TP1 453 aa13.01□□□□□ -0.33
HERC6-203ENST00000380265 SLC13A5Q86YT5 568 aaPredicted RBP13.01□□□□□ -0.33
HERC6-203ENST00000380265 C4orf33Q8N1A6 199 aa13.01□□□□□ -0.33
HERC6-203ENST00000380265 B4GALNT2Q8NHY0 566 aa13.01□□□□□ -0.33
HERC6-203ENST00000380265 UBE2TQ9NPD8 197 aaPredicted RBP13.01□□□□□ -0.33
HERC6-203ENST00000380265 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.01□□□□□ -0.33
HERC6-203ENST00000380265 ZFP69BQ9UJL9 534 aa13.01□□□□□ -0.33
HERC6-203ENST00000380265 FRMD4BQ9Y2L6 1034 aa13.01□□□□□ -0.33
HERC6-203ENST00000380265 PCDHA2Q9Y5H9 948 aa13.01□□□□□ -0.33
HERC6-203ENST00000380265 FOXN3O00409 490 aaPredicted RBP13.01□□□□□ -0.33
HERC6-203ENST00000380265 CA4P22748 312 aa13.01□□□□□ -0.33
HERC6-203ENST00000380265 CNGA1P29973 690 aa13.01□□□□□ -0.33
HERC6-203ENST00000380265 ITGA8P53708 1063 aa13.01□□□□□ -0.33
HERC6-203ENST00000380265 RPS8P62241 208 aaKnown RBP13.01□□□□□ -0.33
HERC6-203ENST00000380265 MYL7Q01449 175 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms